RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 IAH1Q2TAA2 248 aaPredicted RBP12.19□□□□□ -0.46
HMGN1-204ENST00000380749 ZNF546Q86UE3 836 aa12.19□□□□□ -0.46
HMGN1-204ENST00000380749 TMEM256Q8N2U0 113 aa12.19□□□□□ -0.46
HMGN1-204ENST00000380749 OR8A1Q8NGG7 326 aa12.19□□□□□ -0.46
HMGN1-204ENST00000380749 ARV1Q9H2C2 271 aa12.19□□□□□ -0.46
HMGN1-204ENST00000380749 TRAV12-2A0A075B6T6 113 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 LINC00854A0A1B0GVQ3 168 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 CXCL3P19876 107 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 ANXA7P20073 488 aaKnown RBP12.18□□□□□ -0.46
HMGN1-204ENST00000380749 TAS2R30P59541 319 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 PSG3Q16557 428 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 PXDC1Q5TGL8 231 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 LCN15Q6UWW0 184 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 Q6ZR54 194 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 HSPG2P98160 4391 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 GOSR2O14653 212 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 DEFB130BP0DP73 79 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 DEFB130AP0DP74 79 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 MED14OSP0DP75 135 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 CXCL2P19875 107 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 FAM3BP58499 235 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-204ENST00000380749 ZBTB8BQ8NAP8 495 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-204ENST00000380749 LINC01587Q99440 93 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 ATG101Q9BSB4 218 aa12.18□□□□□ -0.46
HMGN1-204ENST00000380749 CNPY1Q3B7I2 92 aa12.17□□□□□ -0.46
HMGN1-204ENST00000380749 RPUSD4Q96CM3 377 aaKnown RBP12.17□□□□□ -0.46
HMGN1-204ENST00000380749 C16orf74Q96GX8 76 aa12.17□□□□□ -0.46
HMGN1-204ENST00000380749 SLC50A1Q9BRV3 221 aa12.17□□□□□ -0.46
HMGN1-204ENST00000380749 GSKIPQ9P0R6 139 aa12.17□□□□□ -0.46
HMGN1-204ENST00000380749 RCL1Q9Y2P8 373 aaKnown RBP12.17□□□□□ -0.46
HMGN1-204ENST00000380749 LRP1BQ9NZR2 4599 aa12.16□□□□□ -0.46
HMGN1-204ENST00000380749 PRM2P04554 102 aa12.16□□□□□ -0.46
HMGN1-204ENST00000380749 BTCP35070 178 aa12.16□□□□□ -0.46
HMGN1-204ENST00000380749 TAS2R60P59551 318 aa12.16□□□□□ -0.46
HMGN1-204ENST00000380749 LINC00305Q7Z4B0 112 aa12.16□□□□□ -0.46
HMGN1-204ENST00000380749 MITD1Q8WV92 249 aa12.16□□□□□ -0.46
HMGN1-204ENST00000380749 GGACTQ9BVM4 153 aa12.16□□□□□ -0.46
HMGN1-204ENST00000380749 F5H768 121 aa12.15□□□□□ -0.46
HMGN1-204ENST00000380749 AGPAT2O15120 278 aa12.15□□□□□ -0.46
HMGN1-204ENST00000380749 COX7A2P2O60397 106 aa12.15□□□□□ -0.46
HMGN1-204ENST00000380749 ATP5G1P05496 136 aa12.15□□□□□ -0.46
HMGN1-204ENST00000380749 CDKN1BP46527 198 aa12.15□□□□□ -0.46
HMGN1-204ENST00000380749 ATP5G3P48201 142 aa12.15□□□□□ -0.46
HMGN1-204ENST00000380749 C1orf134Q5TEV5 83 aa12.15□□□□□ -0.46
HMGN1-204ENST00000380749 PATE2Q6UY27 113 aa12.15□□□□□ -0.46
HMGN1-204ENST00000380749 PLAC8L1A1L4L8 177 aa12.14□□□□□ -0.47
HMGN1-204ENST00000380749 L7N2F9 121 aa12.14□□□□□ -0.47
HMGN1-204ENST00000380749 MRPS12O15235 138 aaKnown RBP12.14□□□□□ -0.47
HMGN1-204ENST00000380749 IL7P13232 177 aa12.14□□□□□ -0.47
HMGN1-204ENST00000380749 HTN1P15515 57 aa12.14□□□□□ -0.47
HMGN1-204ENST00000380749 AZU1P20160 251 aa12.14□□□□□ -0.47
HMGN1-204ENST00000380749 VAMP2P63027 116 aa12.14□□□□□ -0.47
HMGN1-204ENST00000380749 ZNF846Q147U1 533 aa12.14□□□□□ -0.47
HMGN1-204ENST00000380749 BPIFA4PQ86YQ2 179 aa12.14□□□□□ -0.47
HMGN1-204ENST00000380749 C20orf85Q9H1P6 137 aa12.14□□□□□ -0.47
HMGN1-204ENST00000380749 ZNF331Q9NQX6 463 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-204ENST00000380749 C7orf66A4D0T2 115 aa12.13□□□□□ -0.47
HMGN1-204ENST00000380749 MBPP02686 304 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-204ENST00000380749 ZNF493Q6ZR52 646 aa12.13□□□□□ -0.47
HMGN1-204ENST00000380749 TMEM263Q8WUH6 116 aaKnown RBP12.13□□□□□ -0.47
HMGN1-204ENST00000380749 SDHCQ99643 169 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-204ENST00000380749 TIMM8BQ9Y5J9 83 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-204ENST00000380749 CBY3A6NI87 242 aa12.12□□□□□ -0.47
HMGN1-204ENST00000380749 H7BYZ3 331 aa12.12□□□□□ -0.47
HMGN1-204ENST00000380749 NUDT3O95989 172 aa12.12□□□□□ -0.47
HMGN1-204ENST00000380749 ARL16Q0P5N6 197 aa12.12□□□□□ -0.47
HMGN1-204ENST00000380749 OR10J6PQ8NGY7 276 aa12.12□□□□□ -0.47
HMGN1-204ENST00000380749 MGST2Q99735 147 aa12.12□□□□□ -0.47
HMGN1-204ENST00000380749 C20orf144Q9BQM9 153 aa12.12□□□□□ -0.47
HMGN1-204ENST00000380749 PXMP4Q9Y6I8 212 aa12.12□□□□□ -0.47
HMGN1-204ENST00000380749 BCAP31P51572 246 aa12.11□□□□□ -0.47
HMGN1-204ENST00000380749 RAB31Q13636 194 aa12.11□□□□□ -0.47
HMGN1-204ENST00000380749 FCN2Q15485 313 aa12.11□□□□□ -0.47
HMGN1-204ENST00000380749 C10orf113Q5VZT2 155 aa12.11□□□□□ -0.47
HMGN1-204ENST00000380749 ABCA13Q86UQ4 5058 aa12.11□□□□□ -0.47
HMGN1-204ENST00000380749 FAM25EA8MYX2 175 aa12.1□□□□□ -0.47
HMGN1-204ENST00000380749 CCSO14618 274 aa12.1□□□□□ -0.47
HMGN1-204ENST00000380749 PRB4P10163 310 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-204ENST00000380749 CAMLGP49069 296 aa12.1□□□□□ -0.47
HMGN1-204ENST00000380749 CAV2P51636 162 aa12.1□□□□□ -0.47
HMGN1-204ENST00000380749 CCL18P55774 89 aa12.1□□□□□ -0.47
HMGN1-204ENST00000380749 OPCMLQ14982 345 aa12.1□□□□□ -0.47
HMGN1-204ENST00000380749 Q6ZRG5 221 aa12.1□□□□□ -0.47
HMGN1-204ENST00000380749 RNASE8Q8TDE3 154 aaKnown RBP12.1□□□□□ -0.47
HMGN1-204ENST00000380749 NOP10Q9NPE3 64 aaKnown RBP12.1□□□□□ -0.47
HMGN1-204ENST00000380749 LSM5Q9Y4Y9 91 aaKnown RBP12.1□□□□□ -0.47
HMGN1-204ENST00000380749 SLC17A3O00476 420 aa12.09□□□□□ -0.47
HMGN1-204ENST00000380749 SNRPCP09234 159 aaKnown RBP12.09□□□□□ -0.47
HMGN1-204ENST00000380749 CCDC28AQ8IWP9 274 aa12.09□□□□□ -0.47
HMGN1-204ENST00000380749 TMEM37Q8WXS4 190 aa12.09□□□□□ -0.47
HMGN1-204ENST00000380749 NBDYA0A0U1RRE5 68 aa12.08□□□□□ -0.48
HMGN1-204ENST00000380749 H3BTX0 84 aa12.08□□□□□ -0.48
HMGN1-204ENST00000380749 LYRM1O43325 122 aa12.08□□□□□ -0.48
HMGN1-204ENST00000380749 IGLC2P0DOY2 106 aa12.08□□□□□ -0.48
HMGN1-204ENST00000380749 PVALBP20472 110 aaPredicted RBP12.08□□□□□ -0.48
HMGN1-204ENST00000380749 CLINT1Q14677 625 aa12.08□□□□□ -0.48
HMGN1-204ENST00000380749 GFI1BQ5VTD9 330 aa12.08□□□□□ -0.48
HMGN1-204ENST00000380749 OR1L4Q8NGR5 311 aa12.08□□□□□ -0.48
HMGN1-204ENST00000380749 ZNRF2Q8NHG8 242 aa12.08□□□□□ -0.48
HMGN1-204ENST00000380749 RNF141Q8WVD5 230 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms