RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 HIST2H2BEQ16778 126 aa15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 RPEL1Q2QD12 228 aa15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 HIST1H2BHQ93079 126 aa15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 HIST1H2BNQ99877 126 aa15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 HIST1H2BMQ99879 126 aa15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 VPREB3Q9UKI3 123 aa15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 TLN2Q9Y4G6 2542 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 TRAV8-1A0A0A6YYK1 113 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 LTAP01374 205 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 TRBV12-3P01733 135 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 LCNL1Q6ZST4 164 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 SMIM12Q96EX1 92 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 MLST8Q9BVC4 326 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 ZNF580Q9UK33 172 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 IGLV2-11P01706 119 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 IGHV3-11P01762 117 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 TRGC1P0CF51 173 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 PRR27Q6MZM9 219 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 TMEM190Q8WZ59 177 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 BTF3L4Q96K17 158 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 AAMDCQ9H7C9 122 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 SERTAD4Q9NUC0 356 aa15.31■□□□□ 0.04
PDLIM5-205ENST00000380180 M0R3E3 92 aa15.3■□□□□ 0.04
PDLIM5-205ENST00000380180 SMAD7O15105 426 aaKnown RBP15.3■□□□□ 0.04
PDLIM5-205ENST00000380180 PRB4P10163 310 aaPredicted RBP15.3■□□□□ 0.04
PDLIM5-205ENST00000380180 RAB9AP51151 201 aa15.3■□□□□ 0.04
PDLIM5-205ENST00000380180 PSG9Q00887 426 aa15.3■□□□□ 0.04
PDLIM5-205ENST00000380180 FAM231DQ6ZW35 169 aa15.3■□□□□ 0.04
PDLIM5-205ENST00000380180 ITPR2Q14571 2701 aa15.3■□□□□ 0.04
PDLIM5-205ENST00000380180 ZNF705GA8MUZ8 300 aaPredicted RBP15.29■□□□□ 0.04
PDLIM5-205ENST00000380180 HOXA3O43365 443 aaPredicted RBP15.29■□□□□ 0.04
PDLIM5-205ENST00000380180 ZNF207O43670 478 aaKnown RBP15.29■□□□□ 0.04
PDLIM5-205ENST00000380180 APOHP02749 345 aaPredicted RBP15.29■□□□□ 0.04
PDLIM5-205ENST00000380180 NUDT10Q8NFP7 164 aa15.29■□□□□ 0.04
PDLIM5-205ENST00000380180 NUDT11Q96G61 164 aa15.29■□□□□ 0.04
PDLIM5-205ENST00000380180 METTL26Q96S19 204 aa15.29■□□□□ 0.04
PDLIM5-205ENST00000380180 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.29■□□□□ 0.04
PDLIM5-205ENST00000380180 IGHV3-66A0A0C4DH42 116 aa15.29■□□□□ 0.04
PDLIM5-205ENST00000380180 FABP9Q0Z7S8 132 aa15.29■□□□□ 0.04
PDLIM5-205ENST00000380180 SMUG1Q53HV7 270 aa15.29■□□□□ 0.04
PDLIM5-205ENST00000380180 PRDM13Q9H4Q3 707 aa15.29■□□□□ 0.04
PDLIM5-205ENST00000380180 FLNAP21333 2647 aaKnown RBP15.28■□□□□ 0.04
PDLIM5-205ENST00000380180 TRAV9-1A0A075B6T8 112 aa15.28■□□□□ 0.04
PDLIM5-205ENST00000380180 IGHV3OR16-13A0A075B7E8 117 aa15.28■□□□□ 0.04
PDLIM5-205ENST00000380180 IGHV3-74A0A0B4J1X5 117 aa15.28■□□□□ 0.04
PDLIM5-205ENST00000380180 DIRC3C9JPN6 131 aa15.28■□□□□ 0.04
PDLIM5-205ENST00000380180 NDUFA6P56556 154 aa15.28■□□□□ 0.04
PDLIM5-205ENST00000380180 PRNTQ86SH4 94 aa15.28■□□□□ 0.04
PDLIM5-205ENST00000380180 Q86TA4 180 aa15.28■□□□□ 0.04
PDLIM5-205ENST00000380180 OR4X2Q8NGF9 303 aa15.28■□□□□ 0.04
PDLIM5-205ENST00000380180 A0A0G2JLM5 398 aa15.27■□□□□ 0.04
PDLIM5-205ENST00000380180 UBE2CO00762 179 aa15.27■□□□□ 0.04
PDLIM5-205ENST00000380180 IGHV3-49A0A0A0MS15 119 aa15.27■□□□□ 0.03
PDLIM5-205ENST00000380180 GATCO43716 136 aaKnown RBP15.27■□□□□ 0.03
PDLIM5-205ENST00000380180 CA1P00915 261 aaPredicted RBP15.27■□□□□ 0.03
PDLIM5-205ENST00000380180 TMEM75Q8N9X5 138 aa15.27■□□□□ 0.03
PDLIM5-205ENST00000380180 U3KQE9 123 aa15.27■□□□□ 0.03
PDLIM5-205ENST00000380180 ZNF785A8K8V0 405 aa15.26■□□□□ 0.03
PDLIM5-205ENST00000380180 K7EQM0 130 aa15.26■□□□□ 0.03
PDLIM5-205ENST00000380180 ACTL10Q5JWF8 245 aa15.26■□□□□ 0.03
PDLIM5-205ENST00000380180 LINC00322Q6ZN03 302 aaPredicted RBP15.26■□□□□ 0.03
PDLIM5-205ENST00000380180 TMEM183AQ8IXX5 376 aa15.26■□□□□ 0.03
PDLIM5-205ENST00000380180 GCN1Q92616 2671 aaKnown RBP15.26■□□□□ 0.03
PDLIM5-205ENST00000380180 TRBV6-1A0A0K0K1D8 114 aa15.26■□□□□ 0.03
PDLIM5-205ENST00000380180 SMIM27A0A1W2PRY6 76 aa15.26■□□□□ 0.03
PDLIM5-205ENST00000380180 IGHG4P01861 327 aa15.26■□□□□ 0.03
PDLIM5-205ENST00000380180 PSMB8P28062 276 aa15.26■□□□□ 0.03
PDLIM5-205ENST00000380180 PSG3Q16557 428 aa15.26■□□□□ 0.03
PDLIM5-205ENST00000380180 C1orf194Q5T5A4 169 aa15.26■□□□□ 0.03
PDLIM5-205ENST00000380180 IL17RELQ6ZVW7 336 aa15.26■□□□□ 0.03
PDLIM5-205ENST00000380180 NDUFA4O00483 81 aa15.25■□□□□ 0.03
PDLIM5-205ENST00000380180 ZNF253O75346 499 aa15.25■□□□□ 0.03
PDLIM5-205ENST00000380180 CSN1S1P47710 185 aa15.25■□□□□ 0.03
PDLIM5-205ENST00000380180 AKR1D1P51857 326 aa15.25■□□□□ 0.03
PDLIM5-205ENST00000380180 TCL1AP56279 114 aa15.25■□□□□ 0.03
PDLIM5-205ENST00000380180 IGFL4Q6B9Z1 124 aa15.25■□□□□ 0.03
PDLIM5-205ENST00000380180 C10orf99Q6UWK7 81 aa15.25■□□□□ 0.03
PDLIM5-205ENST00000380180 UNQ9165/PRO28630Q6UXU0 137 aa15.25■□□□□ 0.03
PDLIM5-205ENST00000380180 Q71RC1 249 aaPredicted RBP15.25■□□□□ 0.03
PDLIM5-205ENST00000380180 PRSS22Q9GZN4 317 aa15.25■□□□□ 0.03
PDLIM5-205ENST00000380180 ZNF331Q9NQX6 463 aaPredicted RBP15.25■□□□□ 0.03
PDLIM5-205ENST00000380180 PSG8Q9UQ74 426 aa15.25■□□□□ 0.03
PDLIM5-205ENST00000380180 A0A087X0K7 114 aa15.24■□□□□ 0.03
PDLIM5-205ENST00000380180 TRAPPC1Q9Y5R8 145 aa15.24■□□□□ 0.03
PDLIM5-205ENST00000380180 GRAMD2BQ96HH9 432 aa15.24■□□□□ 0.03
PDLIM5-205ENST00000380180 SONP18583 2426 aaKnown RBP15.23■□□□□ 0.03
PDLIM5-205ENST00000380180 HLA-DMBP28068 263 aa15.23■□□□□ 0.03
PDLIM5-205ENST00000380180 ASCL2Q99929 193 aa15.23■□□□□ 0.03
PDLIM5-205ENST00000380180 C19orf71A6NCJ1 209 aa15.22■□□□□ 0.03
PDLIM5-205ENST00000380180 SPINK4O60575 86 aa15.22■□□□□ 0.03
PDLIM5-205ENST00000380180 FRMD6-AS1P0C7T7 363 aa15.22■□□□□ 0.03
PDLIM5-205ENST00000380180 HOXA5P20719 270 aa15.22■□□□□ 0.03
PDLIM5-205ENST00000380180 SLC35B1P78383 322 aa15.22■□□□□ 0.03
PDLIM5-205ENST00000380180 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.22■□□□□ 0.03
PDLIM5-205ENST00000380180 ARL6IP6Q8N6S5 226 aa15.22■□□□□ 0.03
PDLIM5-205ENST00000380180 SIGLECL1Q8N7X8 197 aa15.22■□□□□ 0.03
PDLIM5-205ENST00000380180 DUX5Q96PT3 197 aa15.22■□□□□ 0.03
PDLIM5-205ENST00000380180 FOXC2Q99958 501 aa15.22■□□□□ 0.03
PDLIM5-205ENST00000380180 NPFFR1Q9GZQ6 430 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms