RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 GALR1P47211 349 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 CMC4P56277 68 aaPredicted RBP3.3□□□□□ -1.88
C9orf72-203ENST00000380003 NHLH2Q02577 135 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 ERCC8Q13216 396 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 MORN3Q6PF18 240 aaPredicted RBP3.3□□□□□ -1.88
C9orf72-203ENST00000380003 LINC00528Q8N1L1 170 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 LRTM2Q8N967 370 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 OR11H7Q8NGC8 314 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 OR10P1Q8NGE3 313 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 NIPSNAP3BQ9BS92 247 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 KRTAP4-5Q9BYR2 181 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 HIGD1AQ9Y241 93 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 DYNC1H1Q14204 4646 aaKnown RBP3.3□□□□□ -1.88
C9orf72-203ENST00000380003 TRAV12-3A0A0B4J271 114 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 HYPMO75409 117 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 IFNA21P01568 189 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 HBE1P02100 147 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 TCRBP04435 133 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 ATF4P18848 351 aaPredicted RBP3.3□□□□□ -1.88
C9orf72-203ENST00000380003 DAD1P61803 113 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 IFITM3Q01628 133 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 RAB32Q13637 225 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 TMEM144Q7Z5S9 345 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 NRARPQ7Z6K4 114 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 NOXA1Q86UR1 476 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 EXOC3-AS1Q8N2X6 119 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 THAP8Q8NA92 274 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 PPP1R14DQ9NXH3 145 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 HSPG2P98160 4391 aa3.3□□□□□ -1.88
C9orf72-203ENST00000380003 DNAH11Q96DT5 4516 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 TSC22D2O75157 780 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 MED6O75586 246 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 OR10J4P0C629 311 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 PSMB3P49720 205 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 CLINT1Q14677 625 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 OPCMLQ14982 345 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 SPATA31B1PQ5VZV4 182 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 FAM122CQ6P4D5 195 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 TEPPQ6URK8 271 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 RPUSD4Q96CM3 377 aaKnown RBP3.29□□□□□ -1.88
C9orf72-203ENST00000380003 C1QTNF4Q9BXJ3 329 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 TNFRSF18Q9Y5U5 241 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 DNAH17Q9UFH2 4485 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 HERC1Q15751 4861 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 TRAV2A0A0B4J234 112 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 IGSF23A1L1A6 192 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 PLAC8L1A1L4L8 177 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 PRSS29PA6NIE9 313 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 CENPXA8MT69 81 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 C11orf94C9JXX5 98 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 H3BRN7 92 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 K7EPK0 472 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 HMGB3O15347 200 aaKnown RBP3.29□□□□□ -1.88
C9orf72-203ENST00000380003 TMEM14EPQ6UXP3 125 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 MITD1Q8WV92 249 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 SGK494Q96LW2 274 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 CIB3Q96Q77 187 aaPredicted RBP3.29□□□□□ -1.88
C9orf72-203ENST00000380003 BCL7BQ9BQE9 202 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 SHANK2-AS3Q9BTD1 123 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 HRH4Q9H3N8 390 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 NPVFQ9HCQ7 196 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 SEPSECSQ9HD40 501 aaKnown RBP3.29□□□□□ -1.88
C9orf72-203ENST00000380003 APOBP04114 4563 aaKnown RBP3.29□□□□□ -1.88
C9orf72-203ENST00000380003 FAT1Q14517 4588 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 GAGE12BA1L429 117 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 L7N2F9 121 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 GAGE7O76087 117 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 IGHV3-53P01767 116 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 GAGE12FP0CL80 117 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 GAGE12GP0CL81 117 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 GAGE12IP0CL82 117 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 CAMLGP49069 296 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 VAMP2P63027 116 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 BAXQ07812 192 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 OR8A1Q8NGG7 326 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 SMIM3Q9BZL3 60 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 TP53TG3Q9ULZ0 132 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 GOLT1BQ9Y3E0 138 aa3.29□□□□□ -1.88
C9orf72-203ENST00000380003 DNAH5Q8TE73 4624 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 TRAV26-1A0A087WT03 109 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 FAM240BA0A1B0GVZ2 78 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 COX7A2P2O60397 106 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 RPP30P78346 268 aaKnown RBP3.28□□□□□ -1.88
C9orf72-203ENST00000380003 CD300CQ08708 224 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 ZNF846Q147U1 533 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 C1orf194Q5T5A4 169 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 GFI1BQ5VTD9 330 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 POM121L12Q8N7R1 296 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 Q8TAT8 98 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 SMIM8Q96KF7 97 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 HYLS1Q96M11 299 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 ZNF586Q9NXT0 402 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 OR5AC2Q9NZP5 309 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 MGAT4CQ9UBM8 478 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 MYCBP2O75592 4640 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 IGKV2-40A0A087WW87 121 aaPredicted RBP3.28□□□□□ -1.88
C9orf72-203ENST00000380003 MRPS12O15235 138 aaKnown RBP3.28□□□□□ -1.88
C9orf72-203ENST00000380003 IGKV2D-40P01614 121 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms