RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 KIR3DP1A8MWS1 328 aa4.94□□□□□ -1.62
CUBN-202ENST00000377833 HERVK_113P63121 156 aa4.94□□□□□ -1.62
CUBN-202ENST00000377833 RSPO4Q2I0M5 234 aaPredicted RBP4.94□□□□□ -1.62
CUBN-202ENST00000377833 TRGV4A0A0C4DH28 118 aa4.94□□□□□ -1.62
CUBN-202ENST00000377833 SIGLEC9Q9Y336 463 aa4.94□□□□□ -1.62
CUBN-202ENST00000377833 MSRB2Q9Y3D2 182 aa4.94□□□□□ -1.62
CUBN-202ENST00000377833 I3L3M4 83 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 TIMM23O14925 209 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 PRKNO60260 465 aaPredicted RBP4.93□□□□□ -1.62
CUBN-202ENST00000377833 AMELYQ99218 206 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 PYGO2Q9BRQ0 406 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 TMEM160Q9NX00 188 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 TDGF1P13385 188 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 ADAMTS20P59510 1910 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 RFPL3SP0C7P2 107 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 BIVMQ86UB2 503 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 TMSB15BA0A087X1C1 80 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 C11orf44Q8N8P7 122 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 MEGF9Q9H1U4 602 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 ZNF672Q499Z4 452 aaPredicted RBP4.93□□□□□ -1.62
CUBN-202ENST00000377833 TRAV8-4A0A0B4J246 113 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 ZNHIT1O43257 154 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 GAGE1Q13065 139 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 FAM216BQ8N7L0 139 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 WFDC6Q9BQY6 131 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 SRRM4A7MD48 611 aaKnown RBP4.93□□□□□ -1.62
CUBN-202ENST00000377833 ELANEP08246 267 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 SCO2A0A1W2PP80 73 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 IFITM1P13164 125 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 RPL23P62829 140 aaKnown RBP4.93□□□□□ -1.62
CUBN-202ENST00000377833 ZNF833PQ6ZTB9 187 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 TRAV13-2A0A0B4J235 113 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 C5orf63A6NC05 138 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 INS-IGF2F8WCM5 200 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 C16orf47Q6ZP98 133 aaPredicted RBP4.93□□□□□ -1.62
CUBN-202ENST00000377833 AGRNO00468 2067 aa4.93□□□□□ -1.62
CUBN-202ENST00000377833 NDUFA4O00483 81 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 TGFAP01135 160 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 TFF3Q07654 80 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 Q6ZS92 163 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 FBXL15Q9H469 300 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 GAS1P54826 345 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 PAX9P55771 341 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 POU2AF1Q16633 256 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 LHFPL4Q7Z7J7 247 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 HIST1H2BLQ99880 126 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 AKIRIN1Q9H9L7 192 aaPredicted RBP4.92□□□□□ -1.62
CUBN-202ENST00000377833 VWC2LB2RUY7 222 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 CHCHD5Q9BSY4 110 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 PCNX3Q9H6A9 2034 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.92□□□□□ -1.62
CUBN-202ENST00000377833 IL17DQ8TAD2 202 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 H7C2G1 150 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 C11orf52Q96A22 123 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 HLA-DMBP28068 263 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 SIGMAR1Q99720 223 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 LOC102724200A0A096LPH7 203 aaPredicted RBP4.92□□□□□ -1.62
CUBN-202ENST00000377833 CDKN1BP46527 198 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 IGKV1-9A0A0C4DH69 117 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 IGHV1-46P01743 117 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 QRFPP83859 136 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 TPTE2P1Q5T6R2 138 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 NDUFA4L2Q9NRX3 87 aa4.92□□□□□ -1.62
CUBN-202ENST00000377833 IGHV1-18A0A0C4DH31 117 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 PLAUP00749 431 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 IGHV3-7P01780 117 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 LTBRP36941 435 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 PNRC2Q9NPJ4 139 aaKnown RBP4.91□□□□□ -1.62
CUBN-202ENST00000377833 ERG28Q9UKR5 140 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 ZNF462Q96JM2 2506 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 TMEM158Q8WZ71 300 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 TRAV40A0A0B4J280 105 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 CLEC19AQ6UXS0 136 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 FOXI2Q6ZQN5 318 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 SYS1-DBNDD2H3BUS1 97 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 CCL25O15444 150 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 GSN-AS1Q9NRJ2 163 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 IGFBP6P24592 240 aaPredicted RBP4.91□□□□□ -1.62
CUBN-202ENST00000377833 CEACAM8P31997 349 aaPredicted RBP4.91□□□□□ -1.62
CUBN-202ENST00000377833 PAQR4Q8N4S7 273 aaPredicted RBP4.91□□□□□ -1.62
CUBN-202ENST00000377833 OR13C6PQ8NH95 151 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 PSG8Q9UQ74 426 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 MUC22E2RYF6 1773 aaPredicted RBP4.91□□□□□ -1.62
CUBN-202ENST00000377833 GGTLC1Q9BX51 225 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 TRBV25-1A0A075B6N4 114 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 CD300CQ08708 224 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 ADARB2-AS1A8MUL3 147 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 ATP5G1P05496 136 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 ATP5G3P48201 142 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 GAGE2BQ13066 116 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 GAGE2EQ4V326 116 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 TPRX1Q8N7U7 411 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 SLX1AQ9BQ83 275 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 GAGE2DQ9UEU5 116 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 SELLP14151 372 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 Q8NFD4 153 aa4.91□□□□□ -1.62
CUBN-202ENST00000377833 C9JQL5 133 aa4.9□□□□□ -1.62
CUBN-202ENST00000377833 APELAP0DMC3 54 aa4.9□□□□□ -1.62
CUBN-202ENST00000377833 TRAV8-2A0A0B4J237 113 aa4.9□□□□□ -1.63
CUBN-202ENST00000377833 MEX3AA1L020 520 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms