RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 IGLC2P0DOY2 106 aa10.23□□□□□ -0.77
USP11-204ENST00000377107 IGLC3P0DOY3 106 aa10.23□□□□□ -0.77
USP11-204ENST00000377107 ESDP10768 282 aa10.23□□□□□ -0.77
USP11-204ENST00000377107 FAM71F2Q6NXP2 309 aa10.23□□□□□ -0.77
USP11-204ENST00000377107 FAM231DQ6ZW35 169 aa10.23□□□□□ -0.77
USP11-204ENST00000377107 LINC00527Q9UJ94 153 aa10.23□□□□□ -0.77
USP11-204ENST00000377107 PPIFP30405 207 aaKnown RBP10.23□□□□□ -0.77
USP11-204ENST00000377107 FA2HQ7L5A8 372 aa10.23□□□□□ -0.77
USP11-204ENST00000377107 I3L2K1 104 aa10.22□□□□□ -0.77
USP11-204ENST00000377107 K7EIM0 57 aa10.22□□□□□ -0.77
USP11-204ENST00000377107 K7ENP7 123 aa10.22□□□□□ -0.77
USP11-204ENST00000377107 CRYGCP07315 174 aa10.22□□□□□ -0.77
USP11-204ENST00000377107 IGLL1P15814 213 aa10.22□□□□□ -0.77
USP11-204ENST00000377107 HLA-DMBP28068 263 aa10.22□□□□□ -0.77
USP11-204ENST00000377107 Q8N976 141 aa10.22□□□□□ -0.77
USP11-204ENST00000377107 ZNF785A8K8V0 405 aa10.22□□□□□ -0.77
USP11-204ENST00000377107 APOHP02749 345 aaPredicted RBP10.22□□□□□ -0.77
USP11-204ENST00000377107 LINC00614P0C842 121 aa10.22□□□□□ -0.77
USP11-204ENST00000377107 JKAMPQ9P055 326 aa10.22□□□□□ -0.77
USP11-204ENST00000377107 A0A1B0GUT8 65 aa10.21□□□□□ -0.77
USP11-204ENST00000377107 NPIPB5A8MRT5 1133 aa10.21□□□□□ -0.77
USP11-204ENST00000377107 ORM1P02763 201 aa10.21□□□□□ -0.77
USP11-204ENST00000377107 ACACBO00763 2458 aa10.21□□□□□ -0.77
USP11-204ENST00000377107 C20orf202A1L168 122 aa10.21□□□□□ -0.77
USP11-204ENST00000377107 LTAP01374 205 aa10.21□□□□□ -0.77
USP11-204ENST00000377107 LY6DQ14210 128 aa10.21□□□□□ -0.77
USP11-204ENST00000377107 NOTCH3Q9UM47 2321 aa10.21□□□□□ -0.78
USP11-204ENST00000377107 GPR183P32249 361 aa10.21□□□□□ -0.78
USP11-204ENST00000377107 MFAP4P55083 255 aa10.21□□□□□ -0.78
USP11-204ENST00000377107 ZNF491Q8N8L2 437 aa10.21□□□□□ -0.78
USP11-204ENST00000377107 ARPC1AQ92747 370 aa10.21□□□□□ -0.78
USP11-204ENST00000377107 TNFRSF14Q92956 283 aa10.21□□□□□ -0.78
USP11-204ENST00000377107 IGKV3-7A0A075B6H7 116 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 TMEM213A2RRL7 107 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 MYCNOSP40205 109 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 RELQ04864 619 aaPredicted RBP10.2□□□□□ -0.78
USP11-204ENST00000377107 SPATA12Q7Z6I5 190 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 C21orf62Q9NYP8 219 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 TRBV19A0A075B6N1 114 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 SMKR1H3BMG3 65 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 TMEM75Q8N9X5 138 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 MRPL27Q9P0M9 148 aaKnown RBP10.2□□□□□ -0.78
USP11-204ENST00000377107 USP9YO00507 2555 aaPredicted RBP10.2□□□□□ -0.78
USP11-204ENST00000377107 TRAV9-2A0A087WT02 112 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 IGHV1-24A0A0C4DH33 117 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 INS-IGF2F8WCM5 200 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 DLEU1O43261 78 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 NDUFB8O95169 186 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 RIGQ13278 110 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 C5orf64Q2M2E5 130 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 VMO1Q7Z5L0 202 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 SHANK2-AS3Q9BTD1 123 aa10.2□□□□□ -0.78
USP11-204ENST00000377107 CENPEQ02224 2701 aa10.19□□□□□ -0.78
USP11-204ENST00000377107 TMEM189A5PLL7 270 aa10.19□□□□□ -0.78
USP11-204ENST00000377107 CBY3A6NI87 242 aa10.19□□□□□ -0.78
USP11-204ENST00000377107 DYNAPQ8N1N2 210 aa10.19□□□□□ -0.78
USP11-204ENST00000377107 MLST8Q9BVC4 326 aa10.19□□□□□ -0.78
USP11-204ENST00000377107 MAP1LC3CQ9BXW4 147 aa10.19□□□□□ -0.78
USP11-204ENST00000377107 NCR2O95944 276 aa10.19□□□□□ -0.78
USP11-204ENST00000377107 CRYGBP07316 175 aa10.19□□□□□ -0.78
USP11-204ENST00000377107 TSPOP30536 169 aa10.19□□□□□ -0.78
USP11-204ENST00000377107 PTTG1IPP53801 180 aa10.19□□□□□ -0.78
USP11-204ENST00000377107 NDPQ00604 133 aa10.19□□□□□ -0.78
USP11-204ENST00000377107 LOC102724200A0A096LPH7 203 aaPredicted RBP10.19□□□□□ -0.78
USP11-204ENST00000377107 TWIST1Q15672 202 aa10.19□□□□□ -0.78
USP11-204ENST00000377107 VAMP3Q15836 100 aa10.19□□□□□ -0.78
USP11-204ENST00000377107 C8orf31Q8N9H6 132 aa10.19□□□□□ -0.78
USP11-204ENST00000377107 LYZL1Q6UWQ5 148 aa10.18□□□□□ -0.78
USP11-204ENST00000377107 ATP5L2Q7Z4Y8 100 aa10.18□□□□□ -0.78
USP11-204ENST00000377107 C7orf69Q9H7B7 122 aa10.18□□□□□ -0.78
USP11-204ENST00000377107 AP5S1Q9NUS5 200 aa10.18□□□□□ -0.78
USP11-204ENST00000377107 KLF12Q9Y4X4 402 aa10.18□□□□□ -0.78
USP11-204ENST00000377107 OR5AL1P0C617 328 aa10.18□□□□□ -0.78
USP11-204ENST00000377107 AMN1Q8IY45 258 aa10.18□□□□□ -0.78
USP11-204ENST00000377107 BSNQ9UPA5 3926 aa10.18□□□□□ -0.78
USP11-204ENST00000377107 NUDT3O95989 172 aa10.17□□□□□ -0.78
USP11-204ENST00000377107 C21orf62-AS1Q17RA5 79 aa10.17□□□□□ -0.78
USP11-204ENST00000377107 FAM120AOSQ5T036 256 aa10.17□□□□□ -0.78
USP11-204ENST00000377107 RASL11AQ6T310 242 aa10.17□□□□□ -0.78
USP11-204ENST00000377107 WIPF2Q8TF74 440 aaPredicted RBP10.17□□□□□ -0.78
USP11-204ENST00000377107 URB1-AS1Q96HZ7 61 aa10.17□□□□□ -0.78
USP11-204ENST00000377107 C18orf15Q96N68 181 aa10.17□□□□□ -0.78
USP11-204ENST00000377107 TMEM191AQ9H0A3 160 aa10.17□□□□□ -0.78
USP11-204ENST00000377107 THYN1Q9P016 225 aa10.17□□□□□ -0.78
USP11-204ENST00000377107 C19orf71A6NCJ1 209 aa10.17□□□□□ -0.78
USP11-204ENST00000377107 SYS1-DBNDD2H3BUS1 97 aa10.17□□□□□ -0.78
USP11-204ENST00000377107 NHLH1Q02575 133 aa10.17□□□□□ -0.78
USP11-204ENST00000377107 PSG3Q16557 428 aa10.17□□□□□ -0.78
USP11-204ENST00000377107 TMEM219Q86XT9 240 aa10.17□□□□□ -0.78
USP11-204ENST00000377107 RNF182Q8N6D2 247 aa10.17□□□□□ -0.78
USP11-204ENST00000377107 A0A1B0GXF2 115 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 D6R8Y8 96 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 FAM106CPP0CH98 169 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 IFI27P40305 119 aaPredicted RBP10.16□□□□□ -0.78
USP11-204ENST00000377107 RPL11P62913 178 aaKnown RBP10.16□□□□□ -0.78
USP11-204ENST00000377107 ERCC8Q13216 396 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 FAM106AQ4KMX7 169 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 MPV17L2Q567V2 206 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 SIGLEC15Q6ZMC9 328 aa10.16□□□□□ -0.78
USP11-204ENST00000377107 POLQO75417 2590 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms