RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 ATP5G2Q06055 141 aa13.83□□□□□ -0.2
LDLRAP1-201ENST00000374338 RUSC1-AS1Q66K80 236 aa13.83□□□□□ -0.2
LDLRAP1-201ENST00000374338 LINC00322Q6ZN03 302 aaPredicted RBP13.83□□□□□ -0.2
LDLRAP1-201ENST00000374338 OR9G4Q8NGQ1 327 aa13.83□□□□□ -0.2
LDLRAP1-201ENST00000374338 AMMECR1Q9Y4X0 333 aaPredicted RBP13.83□□□□□ -0.2
LDLRAP1-201ENST00000374338 TEX50A0A1B0GTY4 177 aa13.82□□□□□ -0.2
LDLRAP1-201ENST00000374338 CFHR2P36980 270 aa13.82□□□□□ -0.2
LDLRAP1-201ENST00000374338 OR4X2Q8NGF9 303 aa13.82□□□□□ -0.2
LDLRAP1-201ENST00000374338 PGLYRP4Q96LB8 373 aa13.82□□□□□ -0.2
LDLRAP1-201ENST00000374338 HARBI1Q96MB7 349 aa13.82□□□□□ -0.2
LDLRAP1-201ENST00000374338 C17orf100A8MU93 164 aa13.82□□□□□ -0.2
LDLRAP1-201ENST00000374338 SMIM13P0DJ93 91 aa13.82□□□□□ -0.2
LDLRAP1-201ENST00000374338 LINC01560Q8TB33 94 aa13.82□□□□□ -0.2
LDLRAP1-201ENST00000374338 SH2D6Q7Z4S9 175 aa13.81□□□□□ -0.2
LDLRAP1-201ENST00000374338 PIP4P2Q8N4L2 257 aa13.81□□□□□ -0.2
LDLRAP1-201ENST00000374338 NDFIP1Q9BT67 221 aa13.81□□□□□ -0.2
LDLRAP1-201ENST00000374338 TMEM14BQ9NUH8 114 aa13.81□□□□□ -0.2
LDLRAP1-201ENST00000374338 CR1LQ2VPA4 569 aa13.81□□□□□ -0.2
LDLRAP1-201ENST00000374338 TM4SF20Q53R12 229 aa13.81□□□□□ -0.2
LDLRAP1-201ENST00000374338 ASCL5Q7RTU5 278 aa13.81□□□□□ -0.2
LDLRAP1-201ENST00000374338 ASCL2Q99929 193 aa13.81□□□□□ -0.2
LDLRAP1-201ENST00000374338 CTSZQ9UBR2 303 aa13.81□□□□□ -0.2
LDLRAP1-201ENST00000374338 RPUSD1Q9UJJ7 312 aaKnown RBP13.81□□□□□ -0.2
LDLRAP1-201ENST00000374338 SIVA1O15304 175 aa13.8□□□□□ -0.2
LDLRAP1-201ENST00000374338 GATA3P23771 443 aa13.8□□□□□ -0.2
LDLRAP1-201ENST00000374338 OR10X1Q8NGY0 326 aa13.8□□□□□ -0.2
LDLRAP1-201ENST00000374338 MRPL16Q9NX20 251 aaKnown RBP13.8□□□□□ -0.2
LDLRAP1-201ENST00000374338 PGPEP1Q9NXJ5 209 aa13.8□□□□□ -0.2
LDLRAP1-201ENST00000374338 ETDBQ3ZM63 59 aa13.8□□□□□ -0.2
LDLRAP1-201ENST00000374338 C7orf69Q9H7B7 122 aa13.8□□□□□ -0.2
LDLRAP1-201ENST00000374338 HCP5Q6MZN7 132 aa13.8□□□□□ -0.2
LDLRAP1-201ENST00000374338 SLC25A33Q9BSK2 321 aa13.8□□□□□ -0.2
LDLRAP1-201ENST00000374338 DYNLRB1Q9NP97 96 aa13.8□□□□□ -0.2
LDLRAP1-201ENST00000374338 CNTFRP26992 372 aa13.79□□□□□ -0.2
LDLRAP1-201ENST00000374338 MTURNQ8N3F0 131 aa13.79□□□□□ -0.2
LDLRAP1-201ENST00000374338 FAM169BQ8N8A8 192 aa13.79□□□□□ -0.2
LDLRAP1-201ENST00000374338 GTSF1Q8WW33 167 aa13.79□□□□□ -0.2
LDLRAP1-201ENST00000374338 FNDC10F2Z333 226 aa13.79□□□□□ -0.2
LDLRAP1-201ENST00000374338 F8W1H4 67 aa13.79□□□□□ -0.2
LDLRAP1-201ENST00000374338 GATA4P43694 442 aa13.79□□□□□ -0.2
LDLRAP1-201ENST00000374338 FXYD7P58549 80 aa13.79□□□□□ -0.2
LDLRAP1-201ENST00000374338 TAS2R45P59539 299 aa13.79□□□□□ -0.2
LDLRAP1-201ENST00000374338 SLC25A48Q6ZT89 311 aaKnown RBP13.79□□□□□ -0.2
LDLRAP1-201ENST00000374338 SCNM1Q9BWG6 230 aa13.79□□□□□ -0.2
LDLRAP1-201ENST00000374338 SLC25A2Q9BXI2 301 aa13.79□□□□□ -0.2
LDLRAP1-201ENST00000374338 COL25A1Q9BXS0 654 aaPredicted RBP13.79□□□□□ -0.2
LDLRAP1-201ENST00000374338 MRPL36Q9P0J6 103 aaKnown RBP13.79□□□□□ -0.2
LDLRAP1-201ENST00000374338 TRGV8A0A0C4DH27 118 aa13.78□□□□□ -0.2
LDLRAP1-201ENST00000374338 hADV38S2A0JD32 116 aa13.78□□□□□ -0.2
LDLRAP1-201ENST00000374338 A8MWL6 223 aa13.78□□□□□ -0.2
LDLRAP1-201ENST00000374338 ZNF479Q96JC4 524 aa13.78□□□□□ -0.2
LDLRAP1-201ENST00000374338 FAM90A27PA6NNH2 459 aa13.78□□□□□ -0.2
LDLRAP1-201ENST00000374338 SLC25A17O43808 307 aa13.78□□□□□ -0.2
LDLRAP1-201ENST00000374338 PCP2Q8IVA1 136 aa13.78□□□□□ -0.2
LDLRAP1-201ENST00000374338 FAM167A-AS1Q96KT0 104 aa13.78□□□□□ -0.2
LDLRAP1-201ENST00000374338 ZNF714Q96N38 554 aa13.78□□□□□ -0.2
LDLRAP1-201ENST00000374338 UPK2O00526 184 aa13.77□□□□□ -0.2
LDLRAP1-201ENST00000374338 C8orf88P0DMB2 117 aa13.77□□□□□ -0.2
LDLRAP1-201ENST00000374338 INSL3P51460 131 aa13.77□□□□□ -0.2
LDLRAP1-201ENST00000374338 ARPC1AQ92747 370 aa13.77□□□□□ -0.2
LDLRAP1-201ENST00000374338 SS18L2Q9UHA2 77 aa13.77□□□□□ -0.2
LDLRAP1-201ENST00000374338 FOXA2Q9Y261 457 aaPredicted RBP13.77□□□□□ -0.2
LDLRAP1-201ENST00000374338 FAM90A9PA6NNJ1 464 aa13.77□□□□□ -0.21
LDLRAP1-201ENST00000374338 TMEM177Q53S58 311 aa13.77□□□□□ -0.21
LDLRAP1-201ENST00000374338 SHISA2Q6UWI4 295 aa13.77□□□□□ -0.21
LDLRAP1-201ENST00000374338 AP5S1Q9NUS5 200 aa13.77□□□□□ -0.21
LDLRAP1-201ENST00000374338 F11RQ9Y624 299 aaKnown RBP13.77□□□□□ -0.21
LDLRAP1-201ENST00000374338 SPG11Q96JI7 2443 aa13.77□□□□□ -0.21
LDLRAP1-201ENST00000374338 A0A1W2PRD5 423 aa13.77□□□□□ -0.21
LDLRAP1-201ENST00000374338 A0A1W2PRF3 423 aa13.77□□□□□ -0.21
LDLRAP1-201ENST00000374338 A0A1W2PRM7 423 aa13.77□□□□□ -0.21
LDLRAP1-201ENST00000374338 E7EQL1 145 aa13.77□□□□□ -0.21
LDLRAP1-201ENST00000374338 PEX7O00628 323 aa13.77□□□□□ -0.21
LDLRAP1-201ENST00000374338 FXYD2P54710 66 aa13.77□□□□□ -0.21
LDLRAP1-201ENST00000374338 K7ERJ3 54 aa13.76□□□□□ -0.21
LDLRAP1-201ENST00000374338 APOHP02749 345 aaPredicted RBP13.76□□□□□ -0.21
LDLRAP1-201ENST00000374338 ZNF418Q8TF45 676 aaPredicted RBP13.76□□□□□ -0.21
LDLRAP1-201ENST00000374338 OR11H12B2RN74 326 aa13.76□□□□□ -0.21
LDLRAP1-201ENST00000374338 CHEK1O14757 476 aa13.76□□□□□ -0.21
LDLRAP1-201ENST00000374338 TNFRSF1AP19438 455 aa13.76□□□□□ -0.21
LDLRAP1-201ENST00000374338 OR11H1Q8NG94 326 aa13.76□□□□□ -0.21
LDLRAP1-201ENST00000374338 OR11H2Q8NH07 326 aa13.76□□□□□ -0.21
LDLRAP1-201ENST00000374338 TMEM178BH3BS89 294 aa13.75□□□□□ -0.21
LDLRAP1-201ENST00000374338 WT1-ASQ06250 92 aa13.75□□□□□ -0.21
LDLRAP1-201ENST00000374338 CDSNQ15517 529 aa13.75□□□□□ -0.21
LDLRAP1-201ENST00000374338 OR8A1Q8NGG7 326 aa13.75□□□□□ -0.21
LDLRAP1-201ENST00000374338 SOX21Q9Y651 276 aaPredicted RBP13.75□□□□□ -0.21
LDLRAP1-201ENST00000374338 MOSP00540 346 aa13.75□□□□□ -0.21
LDLRAP1-201ENST00000374338 GCSHP23434 173 aa13.75□□□□□ -0.21
LDLRAP1-201ENST00000374338 COX7A1P24310 79 aa13.75□□□□□ -0.21
LDLRAP1-201ENST00000374338 RPP21Q9H633 154 aaKnown RBP13.75□□□□□ -0.21
LDLRAP1-201ENST00000374338 SIGLEC8Q9NYZ4 499 aa13.75□□□□□ -0.21
LDLRAP1-201ENST00000374338 PSG8Q9UQ74 426 aa13.75□□□□□ -0.21
LDLRAP1-201ENST00000374338 CRYBG3Q68DQ2 2970 aa13.75□□□□□ -0.21
LDLRAP1-201ENST00000374338 FAM106CPP0CH98 169 aa13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 CSN1S1P47710 185 aa13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 PRCDQ00LT1 54 aa13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 FAM106AQ4KMX7 169 aa13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 ZNF329Q86UD4 541 aa13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 PHLDA1Q8WV24 401 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms