RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 FOXL2NBQ6ZUU3 175 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 TDRD6O60522 2096 aaKnown RBP9.33□□□□□ -0.92
VCL-202ENST00000372755 B3GALT5-AS1P59052 145 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 YPEL3P61236 119 aaPredicted RBP9.33□□□□□ -0.92
VCL-202ENST00000372755 ZNF114Q8NC26 417 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 LYL1P12980 280 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 SPANXA1Q9NS26 97 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 TP53TG1Q9Y2A0 90 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 FAM231BA6NCW3 169 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 GAGE12JA6NER3 117 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 F5H768 121 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 PFN1P07737 140 aaKnown RBP9.33□□□□□ -0.92
VCL-202ENST00000372755 GAGE1Q13065 139 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 GAGE4Q13068 117 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 GAGE5Q13069 117 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 ZNF124Q15973 351 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 SCN10AQ9Y5Y9 1956 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 DKK1O94907 266 aa9.33□□□□□ -0.92
VCL-202ENST00000372755 OTOFQ9HC10 1997 aa9.32□□□□□ -0.92
VCL-202ENST00000372755 PRSS46E5RG02 174 aa9.32□□□□□ -0.92
VCL-202ENST00000372755 C1orf122Q6ZSJ8 110 aa9.32□□□□□ -0.92
VCL-202ENST00000372755 PATJQ8NI35 1801 aa9.32□□□□□ -0.92
VCL-202ENST00000372755 UBE2V1Q13404 147 aa9.32□□□□□ -0.92
VCL-202ENST00000372755 RMI2Q96E14 147 aa9.32□□□□□ -0.92
VCL-202ENST00000372755 PIKFYVEQ9Y2I7 2098 aa9.32□□□□□ -0.92
VCL-202ENST00000372755 Q8N8P6 123 aa9.32□□□□□ -0.92
VCL-202ENST00000372755 A0A1W2PPI3 338 aa9.31□□□□□ -0.92
VCL-202ENST00000372755 E7EQL1 145 aa9.31□□□□□ -0.92
VCL-202ENST00000372755 POLR2AP24928 1970 aaKnown RBP9.31□□□□□ -0.92
VCL-202ENST00000372755 ATP6V0E1O15342 81 aa9.31□□□□□ -0.92
VCL-202ENST00000372755 XCL2Q9UBD3 114 aa9.31□□□□□ -0.92
VCL-202ENST00000372755 C5orf63A6NC05 138 aa9.31□□□□□ -0.92
VCL-202ENST00000372755 APC2O95996 2303 aa9.31□□□□□ -0.92
VCL-202ENST00000372755 SUMO4Q6EEV6 95 aa9.31□□□□□ -0.92
VCL-202ENST00000372755 ADAMTSL5Q6ZMM2 481 aa9.31□□□□□ -0.92
VCL-202ENST00000372755 UBE2WQ96B02 151 aa9.31□□□□□ -0.92
VCL-202ENST00000372755 AZU1P20160 251 aa9.31□□□□□ -0.92
VCL-202ENST00000372755 Q0VG73 95 aa9.31□□□□□ -0.92
VCL-202ENST00000372755 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 EREGO14944 169 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 IGKV1-16P04430 117 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 SPINK8P0C7L1 97 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 RUSC1-AS1Q66K80 236 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 SP5Q6BEB4 398 aaPredicted RBP9.3□□□□□ -0.92
VCL-202ENST00000372755 SEC16AO15027 2179 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 ICE1Q9Y2F5 2266 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 APOC4P55056 127 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 REG4Q9BYZ8 158 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 IGHV1-69DA0A0B4J2H0 117 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 IGHV1-69P01742 117 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 C2orf66Q6UXQ4 117 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 HS3ST6Q96QI5 342 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 IGHV1OR15-1A0A075B7D0 117 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 MCRIP2Q9BUT9 160 aaKnown RBP9.3□□□□□ -0.92
VCL-202ENST00000372755 KNCNA6PVL3 124 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 THAP8Q8NA92 274 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 NRXN2Q9P2S2 1712 aa9.3□□□□□ -0.92
VCL-202ENST00000372755 MLANAQ16655 118 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 CRIPAKQ8N1N5 446 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 Q8TCH9 128 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 A0A0G2JRQ6 117 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 C5orf24Q7Z6I8 188 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 TMEM243Q9BU79 118 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 SPANXDQ9BXN6 97 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 TRBV20-1A0A075B6N2 111 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 SPINK13Q1W4C9 94 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 FAM104BQ5XKR9 115 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 GTSF1LQ9H1H1 148 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 RP1P56715 2156 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 SVILO95425 2214 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 CABIN1Q9Y6J0 2220 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 E9PQ18 207 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 LINC00205P59089 165 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 MST1LQ2TV78 715 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 LURAP1LQ8IV03 231 aa9.29□□□□□ -0.92
VCL-202ENST00000372755 TMEM213A2RRL7 107 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 C8orf49Q96NF6 230 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 MMP23AO75900 390 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 LY6HO94772 140 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 CFHR3Q02985 330 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 UBL5Q9BZL1 73 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 NCOR1P1Q9H4R4 102 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 KLK9Q9UKQ9 250 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 CASP8AP2Q9UKL3 1982 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 TRBV19A0A075B6N1 114 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 GAGE12BA1L429 117 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 NDUFA4L2Q9NRX3 87 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 TMEM14BQ9NUH8 114 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 NDUFA4O00483 81 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 PFN2P35080 140 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 UTF1Q5T230 341 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 STPG4Q8N801 248 aa9.28□□□□□ -0.92
VCL-202ENST00000372755 Q6ZRM9 215 aa9.27□□□□□ -0.92
VCL-202ENST00000372755 DOCK4Q8N1I0 1966 aa9.27□□□□□ -0.92
VCL-202ENST00000372755 TCF15Q12870 199 aa9.27□□□□□ -0.93
VCL-202ENST00000372755 ZNF833PQ6ZTB9 187 aa9.27□□□□□ -0.93
VCL-202ENST00000372755 LINC00479Q96M42 142 aa9.27□□□□□ -0.93
VCL-202ENST00000372755 PSME4Q14997 1843 aa9.27□□□□□ -0.93
VCL-202ENST00000372755 IGHV3-16A0A0C4DH30 117 aa9.27□□□□□ -0.93
VCL-202ENST00000372755 IGHV2-70DA0A0C4DH43 119 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms