RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PVRIGQ6DKI7 326 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 Q6ZS46 218 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 TGIF2LXQ8IUE1 241 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 C5orf56Q8N8D9 126 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 ZNF114Q8NC26 417 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 TRGV9Q99603 122 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 DERL1Q9BUN8 251 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 PRO1933Q9H354 126 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 NAT8BQ9UHF3 227 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 TSSC4Q9Y5U2 329 aaPredicted RBP8.13□□□□□ -1.11
COL5A1-202ENST00000371820 TRBV20OR9-2A0A075B6H5 130 aa8.12□□□□□ -1.11
COL5A1-202ENST00000371820 C20orf202A1L168 122 aa8.12□□□□□ -1.11
COL5A1-202ENST00000371820 FAM231BA6NCW3 169 aa8.12□□□□□ -1.11
COL5A1-202ENST00000371820 PF4V1P10720 104 aa8.12□□□□□ -1.11
COL5A1-202ENST00000371820 SLC35B1P78383 322 aa8.12□□□□□ -1.11
COL5A1-202ENST00000371820 EBI3Q14213 229 aa8.12□□□□□ -1.11
COL5A1-202ENST00000371820 PMCHL1Q16048 86 aa8.12□□□□□ -1.11
COL5A1-202ENST00000371820 OR4B1Q8NGF8 309 aa8.12□□□□□ -1.11
COL5A1-202ENST00000371820 BORCS7Q96B45 105 aa8.12□□□□□ -1.11
COL5A1-202ENST00000371820 PLXNB1O43157 2135 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 KIR2DL5BA0A0G2JN68 375 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 KIR2DL5BA0A0G2JPC4 375 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 PSMB11A5LHX3 300 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 NCBP2LA6PVI3 153 aaKnown RBP8.11□□□□□ -1.11
COL5A1-202ENST00000371820 SRRM4A7MD48 611 aaKnown RBP8.11□□□□□ -1.11
COL5A1-202ENST00000371820 K7EN84 100 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 MOSP00540 346 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 APCSP02743 223 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 PF4P02776 101 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 GPX1P07203 203 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 REG1BP48304 166 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 PLP1P60201 277 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 UBE2G1P62253 170 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 UBE2L3P68036 154 aaKnown RBP8.11□□□□□ -1.11
COL5A1-202ENST00000371820 DIAPH2-AS1Q14236 149 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 FBLN7Q53RD9 439 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 CT83Q5H943 113 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 KHDC1LQ5JSQ8 128 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 HIST2H2BDQ6DRA6 164 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 TEX43Q6ZNM6 134 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 OR8I2Q8N0Y5 310 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 KIR2DL5AQ8N109 375 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 ST6GALNAC6Q969X2 333 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 MIEN1Q9BRT3 115 aa8.11□□□□□ -1.11
COL5A1-202ENST00000371820 IGHV3-72A0A0B4J1Y9 119 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 A8MWL6 223 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 ZNF253O75346 499 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 IGHG2P01859 326 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 CRYGCP07315 174 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 RD3LP0DJH9 198 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 MGST1P10620 155 aaKnown RBP8.1□□□□□ -1.11
COL5A1-202ENST00000371820 PMCHP20382 165 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 SPATA31B1PQ5VZV4 182 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 TMEM136Q6ZRR5 245 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 FMC1Q96HJ9 113 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 RASL11BQ9BPW5 248 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 VAMP8Q9BV40 100 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 GFRA4Q9GZZ7 299 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 EPDR1Q9UM22 224 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 KLF12Q9Y4X4 402 aa8.1□□□□□ -1.11
COL5A1-202ENST00000371820 TRBV6-1A0A0K0K1D8 114 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 A0A1W2PRX2 142 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 SH2D7A6NKC9 451 aaPredicted RBP8.09□□□□□ -1.11
COL5A1-202ENST00000371820 ADARB2-AS1A8MUL3 147 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 SLC17A3O00476 420 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 PEX7O00628 323 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 HYPMO75409 117 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 SCGB2A1O75556 95 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 IGKV1-16P04430 117 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 CD33P20138 364 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 RPL27AP46776 148 aaKnown RBP8.09□□□□□ -1.11
COL5A1-202ENST00000371820 LYPD1Q8N2G4 141 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 TMEM256Q8N2U0 113 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 Q8N6K4 173 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 ARL6IP6Q8N6S5 226 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 TMEM116Q8NCL8 245 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 TSKUQ8WUA8 353 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 NPIPB3Q92617 1050 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 DAZAP1Q96EP5 407 aaKnown RBP8.09□□□□□ -1.11
COL5A1-202ENST00000371820 FAM167A-AS1Q96KT0 104 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 IGF2BP2-AS1Q96M15 143 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 GPR82Q96P67 336 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 MRPL20Q9BYC9 149 aaKnown RBP8.09□□□□□ -1.11
COL5A1-202ENST00000371820 AURKAIP1Q9NWT8 199 aaPredicted RBP8.09□□□□□ -1.11
COL5A1-202ENST00000371820 ZNF492Q9P255 531 aa8.09□□□□□ -1.11
COL5A1-202ENST00000371820 NOTCH3Q9UM47 2321 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 TRAV30A0A087WSZ9 112 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 A0A1B0GW15 77 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 PGPEP1LA6NFU8 196 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 FBLL1A6NHQ2 334 aaKnown RBP8.08□□□□□ -1.12
COL5A1-202ENST00000371820 K7EQM0 130 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 SERF1AO75920 110 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 PRB2P02812 416 aaPredicted RBP8.08□□□□□ -1.12
COL5A1-202ENST00000371820 DEFA4P12838 97 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 CBLN1P23435 193 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 NUTF2P61970 127 aaKnown RBP8.08□□□□□ -1.12
COL5A1-202ENST00000371820 KLF5Q13887 457 aaPredicted RBP8.08□□□□□ -1.12
COL5A1-202ENST00000371820 CDPF1Q6NVV7 123 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 Q8N9W7 124 aa8.08□□□□□ -1.12
COL5A1-202ENST00000371820 C5orf17Q8NAS9 161 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms