RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 MBD3L5A6NJ08 208 aaPredicted RBP13.83□□□□□ -0.19
CHTOP-203ENST00000368690 PRRG2O14669 202 aa13.83□□□□□ -0.19
CHTOP-203ENST00000368690 S100A7P31151 101 aa13.83□□□□□ -0.19
CHTOP-203ENST00000368690 MC5RP33032 325 aa13.83□□□□□ -0.19
CHTOP-203ENST00000368690 MRGPRG-AS1Q2M3A8 158 aa13.83□□□□□ -0.19
CHTOP-203ENST00000368690 MBD3L2Q8NHZ7 208 aaPredicted RBP13.83□□□□□ -0.19
CHTOP-203ENST00000368690 ZC2HC1AQ96GY0 325 aa13.83□□□□□ -0.19
CHTOP-203ENST00000368690 TIMM8BQ9Y5J9 83 aaPredicted RBP13.83□□□□□ -0.19
CHTOP-203ENST00000368690 ZGRF1Q86YA3 2104 aa13.83□□□□□ -0.19
CHTOP-203ENST00000368690 M0R1B8 84 aa13.83□□□□□ -0.2
CHTOP-203ENST00000368690 RBPJQ06330 500 aa13.83□□□□□ -0.2
CHTOP-203ENST00000368690 NBEAQ8NFP9 2946 aa13.82□□□□□ -0.2
CHTOP-203ENST00000368690 K7EQM0 130 aa13.82□□□□□ -0.2
CHTOP-203ENST00000368690 IFI27P40305 119 aaPredicted RBP13.82□□□□□ -0.2
CHTOP-203ENST00000368690 RUSC1-AS1Q66K80 236 aa13.82□□□□□ -0.2
CHTOP-203ENST00000368690 LYPD1Q8N2G4 141 aa13.82□□□□□ -0.2
CHTOP-203ENST00000368690 OR8A1Q8NGG7 326 aa13.82□□□□□ -0.2
CHTOP-203ENST00000368690 SIGLEC8Q9NYZ4 499 aa13.82□□□□□ -0.2
CHTOP-203ENST00000368690 SCGB1A1P11684 91 aa13.82□□□□□ -0.2
CHTOP-203ENST00000368690 SPCS1Q9Y6A9 102 aa13.82□□□□□ -0.2
CHTOP-203ENST00000368690 ATRXP46100 2492 aa13.81□□□□□ -0.2
CHTOP-203ENST00000368690 SLC25A17O43808 307 aa13.81□□□□□ -0.2
CHTOP-203ENST00000368690 THBDP07204 575 aa13.81□□□□□ -0.2
CHTOP-203ENST00000368690 PAX8Q06710 450 aa13.81□□□□□ -0.2
CHTOP-203ENST00000368690 SLC25A39Q9BZJ4 359 aaPredicted RBP13.81□□□□□ -0.2
CHTOP-203ENST00000368690 THYN1Q9P016 225 aa13.81□□□□□ -0.2
CHTOP-203ENST00000368690 TPRP12270 2363 aaKnown RBP13.81□□□□□ -0.2
CHTOP-203ENST00000368690 NAV3Q8IVL0 2385 aa13.81□□□□□ -0.2
CHTOP-203ENST00000368690 H3BTX0 84 aa13.81□□□□□ -0.2
CHTOP-203ENST00000368690 HBDP02042 147 aa13.81□□□□□ -0.2
CHTOP-203ENST00000368690 FABP2P12104 132 aa13.81□□□□□ -0.2
CHTOP-203ENST00000368690 TMEM189A5PLL7 270 aa13.8□□□□□ -0.2
CHTOP-203ENST00000368690 TNFRSF1AP19438 455 aa13.8□□□□□ -0.2
CHTOP-203ENST00000368690 FAM104BQ5XKR9 115 aa13.8□□□□□ -0.2
CHTOP-203ENST00000368690 LHFPL4Q7Z7J7 247 aa13.8□□□□□ -0.2
CHTOP-203ENST00000368690 ORMDL3Q8N138 153 aa13.8□□□□□ -0.2
CHTOP-203ENST00000368690 ZNF414Q96IQ9 312 aa13.8□□□□□ -0.2
CHTOP-203ENST00000368690 SHISA9B4DS77 424 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 RPL27AP46776 148 aaKnown RBP13.79□□□□□ -0.2
CHTOP-203ENST00000368690 CACNG7P62955 275 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 HCP5Q6MZN7 132 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 EXOC3-AS1Q8N2X6 119 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 PRELID3AQ96N28 172 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 HIGD1BQ9P298 99 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 PSG8Q9UQ74 426 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 INSIG2Q9Y5U4 225 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 ITPR1Q14643 2758 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 TRBV19A0A075B6N1 114 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 FAM106CPP0CH98 169 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 KLRB1Q12918 225 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 PSG3Q16557 428 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 FAM106AQ4KMX7 169 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 TMEM200BQ69YZ2 307 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 IFI27L1Q96BM0 104 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 TPSG1Q9NRR2 321 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 HILPDAQ9Y5L2 63 aa13.79□□□□□ -0.2
CHTOP-203ENST00000368690 D6R8Y8 96 aa13.78□□□□□ -0.2
CHTOP-203ENST00000368690 CCL3L1P16619 93 aa13.78□□□□□ -0.2
CHTOP-203ENST00000368690 TMEM11P17152 192 aa13.78□□□□□ -0.2
CHTOP-203ENST00000368690 LOXL1Q08397 574 aaPredicted RBP13.78□□□□□ -0.2
CHTOP-203ENST00000368690 LY6DQ14210 128 aa13.78□□□□□ -0.2
CHTOP-203ENST00000368690 NGBQ9NPG2 151 aa13.78□□□□□ -0.2
CHTOP-203ENST00000368690 F11RQ9Y624 299 aaKnown RBP13.78□□□□□ -0.2
CHTOP-203ENST00000368690 NDUFS8O00217 210 aa13.77□□□□□ -0.21
CHTOP-203ENST00000368690 CRYGBP07316 175 aa13.77□□□□□ -0.21
CHTOP-203ENST00000368690 SMIM13P0DJ93 91 aa13.77□□□□□ -0.21
CHTOP-203ENST00000368690 LYZP61626 148 aa13.77□□□□□ -0.21
CHTOP-203ENST00000368690 DIAPH2-AS1Q14236 149 aa13.77□□□□□ -0.21
CHTOP-203ENST00000368690 CRIP1P50238 77 aa13.76□□□□□ -0.21
CHTOP-203ENST00000368690 SAMD5Q5TGI4 173 aa13.76□□□□□ -0.21
CHTOP-203ENST00000368690 SIGLEC15Q6ZMC9 328 aa13.76□□□□□ -0.21
CHTOP-203ENST00000368690 SHANK2-AS3Q9BTD1 123 aa13.76□□□□□ -0.21
CHTOP-203ENST00000368690 PRORYQ9H606 182 aa13.76□□□□□ -0.21
CHTOP-203ENST00000368690 LINC01559Q495D7 138 aa13.75□□□□□ -0.21
CHTOP-203ENST00000368690 SAMD13Q5VXD3 122 aa13.75□□□□□ -0.21
CHTOP-203ENST00000368690 Q71RC1 249 aaPredicted RBP13.75□□□□□ -0.21
CHTOP-203ENST00000368690 LINC01546A6NGU7 62 aa13.75□□□□□ -0.21
CHTOP-203ENST00000368690 COX8CQ7Z4L0 72 aa13.75□□□□□ -0.21
CHTOP-203ENST00000368690 RAB37Q96AX2 223 aa13.75□□□□□ -0.21
CHTOP-203ENST00000368690 LOC389332A0A1B0GUA5 103 aa13.74□□□□□ -0.21
CHTOP-203ENST00000368690 SERTM2A0A1B0GWG4 89 aa13.74□□□□□ -0.21
CHTOP-203ENST00000368690 FBLL1A6NHQ2 334 aaKnown RBP13.74□□□□□ -0.21
CHTOP-203ENST00000368690 H3BRN7 92 aa13.74□□□□□ -0.21
CHTOP-203ENST00000368690 NDUFS7O75251 213 aa13.74□□□□□ -0.21
CHTOP-203ENST00000368690 ZNF474Q6S9Z5 364 aaPredicted RBP13.74□□□□□ -0.21
CHTOP-203ENST00000368690 PCP2Q8IVA1 136 aa13.74□□□□□ -0.21
CHTOP-203ENST00000368690 RITA1Q96K30 269 aa13.74□□□□□ -0.21
CHTOP-203ENST00000368690 NAA38Q9BRA0 125 aaKnown RBP13.74□□□□□ -0.21
CHTOP-203ENST00000368690 ZMAT4Q9H898 229 aa13.74□□□□□ -0.21
CHTOP-203ENST00000368690 PKD1L2Q7Z442 2459 aa13.74□□□□□ -0.21
CHTOP-203ENST00000368690 A0A0G2JNJ9 132 aa13.73□□□□□ -0.21
CHTOP-203ENST00000368690 VSTM5A8MXK1 200 aa13.73□□□□□ -0.21
CHTOP-203ENST00000368690 MRPL51Q4U2R6 128 aaKnown RBP13.73□□□□□ -0.21
CHTOP-203ENST00000368690 LYZL1Q6UWQ5 148 aa13.73□□□□□ -0.21
CHTOP-203ENST00000368690 WFDC8Q8IUA0 241 aa13.73□□□□□ -0.21
CHTOP-203ENST00000368690 RASL11BQ9BPW5 248 aa13.73□□□□□ -0.21
CHTOP-203ENST00000368690 Q9UFV3 132 aa13.73□□□□□ -0.21
CHTOP-203ENST00000368690 AMN1Q8IY45 258 aa13.73□□□□□ -0.21
CHTOP-203ENST00000368690 RELNP78509 3460 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 PCNX1Q96RV3 2341 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms