RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 GFRA4Q9GZZ7 299 aa12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 PNRC2Q9NPJ4 139 aaKnown RBP12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 KLK9Q9UKQ9 250 aa12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 PKIGQ9Y2B9 76 aa12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 MTCL1Q9Y4B5 1905 aaKnown RBP12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 B3GALT5-AS1P59052 145 aa12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 KLF5Q13887 457 aaPredicted RBP12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 PRR31Q5SQ13 230 aa12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 TMEM243Q9BU79 118 aa12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 CHAC1Q9BUX1 264 aa12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 LHFPL1Q86WI0 220 aa12.69□□□□□ -0.38
NUCKS1-201ENST00000367142 TMEM75Q8N9X5 138 aa12.69□□□□□ -0.38
NUCKS1-201ENST00000367142 A0A1B0GW64 132 aa12.69□□□□□ -0.38
NUCKS1-201ENST00000367142 CLPSP04118 112 aa12.69□□□□□ -0.38
NUCKS1-201ENST00000367142 LINC01551Q86U37 167 aa12.69□□□□□ -0.38
NUCKS1-201ENST00000367142 GFI1Q99684 422 aa12.69□□□□□ -0.38
NUCKS1-201ENST00000367142 UBE2WQ96B02 151 aa12.69□□□□□ -0.38
NUCKS1-201ENST00000367142 SCN8AQ9UQD0 1980 aa12.69□□□□□ -0.38
NUCKS1-201ENST00000367142 IGHV1OR15-1A0A075B7D0 117 aa12.69□□□□□ -0.38
NUCKS1-201ENST00000367142 SMKR1H3BMG3 65 aa12.69□□□□□ -0.38
NUCKS1-201ENST00000367142 TRBV24-1A0A075B6N3 115 aa12.68□□□□□ -0.38
NUCKS1-201ENST00000367142 TRAV8-1A0A0A6YYK1 113 aa12.68□□□□□ -0.38
NUCKS1-201ENST00000367142 SOCS3O14543 225 aa12.68□□□□□ -0.38
NUCKS1-201ENST00000367142 CFHR2P36980 270 aa12.68□□□□□ -0.38
NUCKS1-201ENST00000367142 ARID1AO14497 2285 aa12.68□□□□□ -0.38
NUCKS1-201ENST00000367142 AMN1Q8IY45 258 aa12.68□□□□□ -0.38
NUCKS1-201ENST00000367142 YPEL3P61236 119 aaPredicted RBP12.68□□□□□ -0.38
NUCKS1-201ENST00000367142 TP53TG1Q9Y2A0 90 aa12.68□□□□□ -0.38
NUCKS1-201ENST00000367142 MMP23AO75900 390 aa12.67□□□□□ -0.38
NUCKS1-201ENST00000367142 COL4A1P02462 1669 aa12.67□□□□□ -0.38
NUCKS1-201ENST00000367142 PFN2P35080 140 aa12.67□□□□□ -0.38
NUCKS1-201ENST00000367142 TCTEX1D4Q5JR98 221 aa12.67□□□□□ -0.38
NUCKS1-201ENST00000367142 PFN1P07737 140 aaKnown RBP12.67□□□□□ -0.38
NUCKS1-201ENST00000367142 GAGE6Q13070 117 aa12.67□□□□□ -0.38
NUCKS1-201ENST00000367142 Q8TCH9 128 aa12.67□□□□□ -0.38
NUCKS1-201ENST00000367142 NDUFA4O00483 81 aa12.67□□□□□ -0.38
NUCKS1-201ENST00000367142 HGFACQ04756 655 aa12.67□□□□□ -0.38
NUCKS1-201ENST00000367142 SCN10AQ9Y5Y9 1956 aa12.66□□□□□ -0.38
NUCKS1-201ENST00000367142 INAFM2P0DMQ5 153 aa12.66□□□□□ -0.38
NUCKS1-201ENST00000367142 CT83Q5H943 113 aa12.66□□□□□ -0.38
NUCKS1-201ENST00000367142 C1orf194Q5T5A4 169 aa12.66□□□□□ -0.38
NUCKS1-201ENST00000367142 ATRAIDQ6UW56 229 aa12.66□□□□□ -0.38
NUCKS1-201ENST00000367142 TPRP12270 2363 aaKnown RBP12.66□□□□□ -0.38
NUCKS1-201ENST00000367142 A0A1W2PPI3 338 aa12.66□□□□□ -0.38
NUCKS1-201ENST00000367142 MRPL27Q9P0M9 148 aaKnown RBP12.66□□□□□ -0.38
NUCKS1-201ENST00000367142 C15orf62A8K5M9 175 aa12.65□□□□□ -0.38
NUCKS1-201ENST00000367142 ZC2HC1BQ5TFG8 222 aa12.65□□□□□ -0.38
NUCKS1-201ENST00000367142 ZNRF2Q8NHG8 242 aa12.65□□□□□ -0.38
NUCKS1-201ENST00000367142 HIST1H2BLQ99880 126 aa12.65□□□□□ -0.38
NUCKS1-201ENST00000367142 NRXN2Q9P2S2 1712 aa12.65□□□□□ -0.38
NUCKS1-201ENST00000367142 PATJQ8NI35 1801 aa12.65□□□□□ -0.38
NUCKS1-201ENST00000367142 TRAV25A0A0B4J276 109 aa12.65□□□□□ -0.38
NUCKS1-201ENST00000367142 RPP25LQ8N5L8 163 aaKnown RBP12.65□□□□□ -0.38
NUCKS1-201ENST00000367142 hDV102S1A0JD36 115 aa12.65□□□□□ -0.38
NUCKS1-201ENST00000367142 UBE2BP63146 152 aa12.65□□□□□ -0.38
NUCKS1-201ENST00000367142 TAL2Q16559 108 aa12.65□□□□□ -0.38
NUCKS1-201ENST00000367142 HS3ST6Q96QI5 342 aa12.65□□□□□ -0.39
NUCKS1-201ENST00000367142 CDKN1BP46527 198 aa12.64□□□□□ -0.39
NUCKS1-201ENST00000367142 SLAQ13239 276 aa12.64□□□□□ -0.39
NUCKS1-201ENST00000367142 TAF1LQ8IZX4 1826 aa12.64□□□□□ -0.39
NUCKS1-201ENST00000367142 IGKV1-16P04430 117 aa12.64□□□□□ -0.39
NUCKS1-201ENST00000367142 Q6ZS49 121 aa12.64□□□□□ -0.39
NUCKS1-201ENST00000367142 MRAPQ8TCY5 172 aa12.64□□□□□ -0.39
NUCKS1-201ENST00000367142 PRSS29PA6NIE9 313 aa12.64□□□□□ -0.39
NUCKS1-201ENST00000367142 SYS1-DBNDD2H3BUS1 97 aa12.64□□□□□ -0.39
NUCKS1-201ENST00000367142 CD5LO43866 347 aa12.64□□□□□ -0.39
NUCKS1-201ENST00000367142 REG4Q9BYZ8 158 aa12.63□□□□□ -0.39
NUCKS1-201ENST00000367142 IGF2BP2-AS1Q96M15 143 aa12.63□□□□□ -0.39
NUCKS1-201ENST00000367142 CXCL1P09341 107 aa12.63□□□□□ -0.39
NUCKS1-201ENST00000367142 G3V318 75 aa12.63□□□□□ -0.39
NUCKS1-201ENST00000367142 FOXL2NBQ6ZUU3 175 aa12.63□□□□□ -0.39
NUCKS1-201ENST00000367142 CRIPAKQ8N1N5 446 aa12.63□□□□□ -0.39
NUCKS1-201ENST00000367142 NAA38Q9BRA0 125 aaKnown RBP12.63□□□□□ -0.39
NUCKS1-201ENST00000367142 IGFL3Q6UXB1 125 aa12.62□□□□□ -0.39
NUCKS1-201ENST00000367142 ZNF492Q9P255 531 aa12.62□□□□□ -0.39
NUCKS1-201ENST00000367142 ELANEP08246 267 aa12.62□□□□□ -0.39
NUCKS1-201ENST00000367142 UBE2CO00762 179 aa12.62□□□□□ -0.39
NUCKS1-201ENST00000367142 ANXA2RQ3ZCQ2 193 aa12.62□□□□□ -0.39
NUCKS1-201ENST00000367142 HIST3H2BBQ8N257 126 aa12.62□□□□□ -0.39
NUCKS1-201ENST00000367142 SCRT2Q9NQ03 307 aa12.62□□□□□ -0.39
NUCKS1-201ENST00000367142 DKK4Q9UBT3 224 aa12.62□□□□□ -0.39
NUCKS1-201ENST00000367142 PRSS46E5RG02 174 aa12.62□□□□□ -0.39
NUCKS1-201ENST00000367142 NXPH4O95158 308 aa12.62□□□□□ -0.39
NUCKS1-201ENST00000367142 C8orf49Q96NF6 230 aa12.62□□□□□ -0.39
NUCKS1-201ENST00000367142 SMIM2Q9BVW6 85 aa12.62□□□□□ -0.39
NUCKS1-201ENST00000367142 C8orf86Q6ZUL3 223 aa12.62□□□□□ -0.39
NUCKS1-201ENST00000367142 TSSC4Q9Y5U2 329 aaPredicted RBP12.62□□□□□ -0.39
NUCKS1-201ENST00000367142 ZNF236Q9UL36 1845 aa12.61□□□□□ -0.39
NUCKS1-201ENST00000367142 ANGP03950 147 aaKnown RBP12.61□□□□□ -0.39
NUCKS1-201ENST00000367142 ZNF833PQ6ZTB9 187 aa12.61□□□□□ -0.39
NUCKS1-201ENST00000367142 CYTL1Q9NRR1 136 aa12.61□□□□□ -0.39
NUCKS1-201ENST00000367142 PSME4Q14997 1843 aa12.61□□□□□ -0.39
NUCKS1-201ENST00000367142 Q8N8P6 123 aa12.61□□□□□ -0.39
NUCKS1-201ENST00000367142 HEATR5BQ9P2D3 2071 aa12.61□□□□□ -0.39
NUCKS1-201ENST00000367142 IGKV2D-24A0A075B6R9 120 aa12.6□□□□□ -0.39
NUCKS1-201ENST00000367142 A0A087X0K7 114 aa12.6□□□□□ -0.39
NUCKS1-201ENST00000367142 C9JAW5 83 aa12.6□□□□□ -0.39
NUCKS1-201ENST00000367142 CRLF1O75462 422 aa12.6□□□□□ -0.39
NUCKS1-201ENST00000367142 MLANAQ16655 118 aa12.6□□□□□ -0.39
NUCKS1-201ENST00000367142 LINC00205P59089 165 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms