RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CD300EQ496F6 205 aaPredicted RBP12.92□□□□□ -0.34
CLSTN1-201ENST00000361311 HAX1O00165 279 aa12.92□□□□□ -0.34
CLSTN1-201ENST00000361311 FAM106CPP0CH98 169 aa12.92□□□□□ -0.34
CLSTN1-201ENST00000361311 ORMDL2Q53FV1 153 aa12.92□□□□□ -0.34
CLSTN1-201ENST00000361311 PGPEP1Q9NXJ5 209 aa12.92□□□□□ -0.34
CLSTN1-201ENST00000361311 NOTCH3Q9UM47 2321 aa12.92□□□□□ -0.34
CLSTN1-201ENST00000361311 ZNF747Q9BV97 191 aa12.92□□□□□ -0.34
CLSTN1-201ENST00000361311 FAM104BQ5XKR9 115 aa12.91□□□□□ -0.34
CLSTN1-201ENST00000361311 CLEC2AQ6UVW9 174 aa12.91□□□□□ -0.34
CLSTN1-201ENST00000361311 TMEM190Q8WZ59 177 aa12.91□□□□□ -0.34
CLSTN1-201ENST00000361311 TNCP24821 2201 aa12.91□□□□□ -0.34
CLSTN1-201ENST00000361311 PSMB11A5LHX3 300 aa12.91□□□□□ -0.34
CLSTN1-201ENST00000361311 ASIPP42127 132 aa12.91□□□□□ -0.34
CLSTN1-201ENST00000361311 Q8TAT8 98 aa12.91□□□□□ -0.34
CLSTN1-201ENST00000361311 NDUFA4L2Q9NRX3 87 aa12.91□□□□□ -0.34
CLSTN1-201ENST00000361311 A0A1W2PPI3 338 aa12.91□□□□□ -0.34
CLSTN1-201ENST00000361311 KHDC1LQ5JSQ8 128 aa12.91□□□□□ -0.34
CLSTN1-201ENST00000361311 PAPPA-AS1Q5QFB9 102 aa12.91□□□□□ -0.34
CLSTN1-201ENST00000361311 ATP6V0BQ99437 205 aa12.91□□□□□ -0.34
CLSTN1-201ENST00000361311 TNFRSF14Q92956 283 aa12.9□□□□□ -0.34
CLSTN1-201ENST00000361311 GEMIN7Q9H840 131 aaKnown RBP12.9□□□□□ -0.34
CLSTN1-201ENST00000361311 FXYD5Q96DB9 178 aa12.9□□□□□ -0.34
CLSTN1-201ENST00000361311 ABCA4P78363 2273 aa12.9□□□□□ -0.34
CLSTN1-201ENST00000361311 IGLV2-14P01704 120 aa12.9□□□□□ -0.34
CLSTN1-201ENST00000361311 RBX1P62877 108 aa12.9□□□□□ -0.34
CLSTN1-201ENST00000361311 RHOGP84095 191 aa12.9□□□□□ -0.34
CLSTN1-201ENST00000361311 TRAV40A0A0B4J280 105 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 F8W1H4 67 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 NDUFB8O95169 186 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 ADIPOQQ15848 244 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 Q6ZR03 302 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 LYPD1Q8N2G4 141 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 ARPC1AQ92747 370 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 SIGLEC8Q9NYZ4 499 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 TSPAN13O95857 204 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 PLNP26678 52 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 KRTAP27-1Q3LI81 207 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 TMEM200BQ69YZ2 307 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 LCNL1Q6ZST4 164 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 NBR2O15453 112 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 ARFGEF3Q5TH69 2177 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 KMT2EQ8IZD2 1858 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 PRTN3P24158 256 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 GAFA1Q96PS6 74 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 VGLL1Q99990 258 aa12.89□□□□□ -0.35
CLSTN1-201ENST00000361311 IGKV3-15P01624 115 aa12.88□□□□□ -0.35
CLSTN1-201ENST00000361311 IGLC1P0CG04 106 aa12.88□□□□□ -0.35
CLSTN1-201ENST00000361311 ID1P41134 155 aa12.88□□□□□ -0.35
CLSTN1-201ENST00000361311 ZC2HC1AQ96GY0 325 aa12.88□□□□□ -0.35
CLSTN1-201ENST00000361311 ZNF56Q15929 161 aa12.88□□□□□ -0.35
CLSTN1-201ENST00000361311 C10orf126Q8N4M7 172 aa12.88□□□□□ -0.35
CLSTN1-201ENST00000361311 SYT8Q8NBV8 401 aa12.88□□□□□ -0.35
CLSTN1-201ENST00000361311 DOPEY2Q9Y3R5 2298 aa12.88□□□□□ -0.35
CLSTN1-201ENST00000361311 ZNF562Q6V9R5 426 aa12.88□□□□□ -0.35
CLSTN1-201ENST00000361311 TP53TG3Q9ULZ0 132 aa12.88□□□□□ -0.35
CLSTN1-201ENST00000361311 TEX48A0A1B0GUV7 120 aa12.87□□□□□ -0.35
CLSTN1-201ENST00000361311 TMEM8BA6NDV4 472 aa12.87□□□□□ -0.35
CLSTN1-201ENST00000361311 FAM159AQ6UWV7 190 aa12.87□□□□□ -0.35
CLSTN1-201ENST00000361311 SCRT2Q9NQ03 307 aa12.87□□□□□ -0.35
CLSTN1-201ENST00000361311 WT1-ASQ06250 92 aa12.87□□□□□ -0.35
CLSTN1-201ENST00000361311 H3BMG7 143 aa12.87□□□□□ -0.35
CLSTN1-201ENST00000361311 K7ERJ3 54 aa12.87□□□□□ -0.35
CLSTN1-201ENST00000361311 SLC50A1Q9BRV3 221 aa12.87□□□□□ -0.35
CLSTN1-201ENST00000361311 SIVA1O15304 175 aa12.87□□□□□ -0.35
CLSTN1-201ENST00000361311 TNFRSF6BO95407 300 aa12.87□□□□□ -0.35
CLSTN1-201ENST00000361311 H7C1H1 209 aa12.86□□□□□ -0.35
CLSTN1-201ENST00000361311 IGHV4-39P01824 125 aa12.86□□□□□ -0.35
CLSTN1-201ENST00000361311 BSPH1Q075Z2 132 aa12.86□□□□□ -0.35
CLSTN1-201ENST00000361311 MRPL51Q4U2R6 128 aaKnown RBP12.86□□□□□ -0.35
CLSTN1-201ENST00000361311 ANKRD39Q53RE8 183 aa12.86□□□□□ -0.35
CLSTN1-201ENST00000361311 EEF1AKMT3Q96AZ1 226 aa12.86□□□□□ -0.35
CLSTN1-201ENST00000361311 ADAMTS9Q9P2N4 1935 aa12.86□□□□□ -0.35
CLSTN1-201ENST00000361311 DKK1O94907 266 aa12.86□□□□□ -0.35
CLSTN1-201ENST00000361311 MRAP2Q96G30 205 aa12.86□□□□□ -0.35
CLSTN1-201ENST00000361311 PLSCR4Q9NRQ2 329 aa12.86□□□□□ -0.35
CLSTN1-201ENST00000361311 SRRM4A7MD48 611 aaKnown RBP12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 C17orf58Q2M2W7 97 aa12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 AMTNQ6UX39 209 aa12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 PCP2Q8IVA1 136 aa12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 MED13Q9UHV7 2174 aa12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 NPIPB6E9PJ23 425 aa12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 ZNF883P0CG24 379 aa12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 LINC01545Q5VT33 79 aa12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 SIGLEC9Q9Y336 463 aa12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 SLC25A15Q9Y619 301 aa12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 CDX4O14627 284 aaPredicted RBP12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 POU2AF1Q16633 256 aa12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 IGF2BP2-AS1Q96M15 143 aa12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 TIMM23O14925 209 aa12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 CTRLP40313 264 aa12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 SHANK2-AS3Q9BTD1 123 aa12.85□□□□□ -0.35
CLSTN1-201ENST00000361311 TRAV2A0A0B4J234 112 aa12.84□□□□□ -0.35
CLSTN1-201ENST00000361311 TMEM75Q8N9X5 138 aa12.84□□□□□ -0.35
CLSTN1-201ENST00000361311 C2orf70A6NJV1 201 aa12.84□□□□□ -0.35
CLSTN1-201ENST00000361311 ATP5G2Q06055 141 aa12.84□□□□□ -0.35
CLSTN1-201ENST00000361311 CIRBPQ14011 172 aaKnown RBP12.84□□□□□ -0.35
CLSTN1-201ENST00000361311 DKK2Q9UBU2 259 aa12.84□□□□□ -0.35
CLSTN1-201ENST00000361311 IGHV1-8P0DP01 117 aa12.84□□□□□ -0.35
CLSTN1-201ENST00000361311 MALRD1Q5VYJ5 2156 aa12.84□□□□□ -0.35
CLSTN1-201ENST00000361311 IGFL4Q6B9Z1 124 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms