RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 NDUFB8O95169 186 aa17.71■□□□□ 0.43
LDB1-201ENST00000361198 ZNF124Q15973 351 aa17.71■□□□□ 0.43
LDB1-201ENST00000361198 TCF24Q7RTU0 167 aa17.71■□□□□ 0.43
LDB1-201ENST00000361198 GTSF1Q8WW33 167 aa17.71■□□□□ 0.43
LDB1-201ENST00000361198 OTORQ9NRC9 128 aa17.71■□□□□ 0.43
LDB1-201ENST00000361198 TRAV30A0A087WSZ9 112 aa17.7■□□□□ 0.42
LDB1-201ENST00000361198 BCL6BQ8N143 479 aaPredicted RBP17.7■□□□□ 0.42
LDB1-201ENST00000361198 CCL19Q99731 98 aa17.7■□□□□ 0.42
LDB1-201ENST00000361198 CELSR1Q9NYQ6 3014 aa17.7■□□□□ 0.42
LDB1-201ENST00000361198 CENPVL3A0A0U1RRI6 287 aa17.7■□□□□ 0.42
LDB1-201ENST00000361198 WI2-2373I1.2A0A1W2PRP0 233 aa17.7■□□□□ 0.42
LDB1-201ENST00000361198 FAM231BA6NCW3 169 aa17.7■□□□□ 0.42
LDB1-201ENST00000361198 NPIPB6E9PJ23 425 aa17.7■□□□□ 0.42
LDB1-201ENST00000361198 NPFFO15130 113 aa17.7■□□□□ 0.42
LDB1-201ENST00000361198 P01737 135 aa17.7■□□□□ 0.42
LDB1-201ENST00000361198 IGHV3-23P01764 117 aa17.7■□□□□ 0.42
LDB1-201ENST00000361198 HLA-DRB1P01911 266 aa17.7■□□□□ 0.42
LDB1-201ENST00000361198 IGLC2P0DOY2 106 aa17.7■□□□□ 0.42
LDB1-201ENST00000361198 IGLC3P0DOY3 106 aa17.7■□□□□ 0.42
LDB1-201ENST00000361198 ZNF48Q96MX3 618 aaPredicted RBP17.7■□□□□ 0.42
LDB1-201ENST00000361198 C21orf62Q9NYP8 219 aa17.7■□□□□ 0.42
LDB1-201ENST00000361198 Q56UQ5 140 aa17.69■□□□□ 0.42
LDB1-201ENST00000361198 EXOC3-AS1Q8N2X6 119 aa17.69■□□□□ 0.42
LDB1-201ENST00000361198 THYN1Q9P016 225 aa17.69■□□□□ 0.42
LDB1-201ENST00000361198 UQCR10Q9UDW1 63 aa17.69■□□□□ 0.42
LDB1-201ENST00000361198 MYO18BQ8IUG5 2567 aa17.69■□□□□ 0.42
LDB1-201ENST00000361198 PMCHL1Q16048 86 aa17.69■□□□□ 0.42
LDB1-201ENST00000361198 BPIFA4PQ86YQ2 179 aa17.69■□□□□ 0.42
LDB1-201ENST00000361198 C17orf77Q96MU5 243 aa17.69■□□□□ 0.42
LDB1-201ENST00000361198 FAM181BA6NEQ2 426 aa17.68■□□□□ 0.42
LDB1-201ENST00000361198 OR2D3Q8NGH3 330 aa17.68■□□□□ 0.42
LDB1-201ENST00000361198 TMEM190Q8WZ59 177 aa17.68■□□□□ 0.42
LDB1-201ENST00000361198 MAP1AP78559 2803 aaPredicted RBP17.68■□□□□ 0.42
LDB1-201ENST00000361198 IGHV4-61A0A0C4DH41 118 aa17.68■□□□□ 0.42
LDB1-201ENST00000361198 FCGR2BP31994 310 aaPredicted RBP17.68■□□□□ 0.42
LDB1-201ENST00000361198 ZFYVE26Q68DK2 2539 aa17.67■□□□□ 0.42
LDB1-201ENST00000361198 IGLV2-11P01706 119 aa17.67■□□□□ 0.42
LDB1-201ENST00000361198 ZNF25P17030 456 aaPredicted RBP17.67■□□□□ 0.42
LDB1-201ENST00000361198 RBPMS2Q6ZRY4 209 aaKnown RBP17.67■□□□□ 0.42
LDB1-201ENST00000361198 Q86TA4 180 aa17.67■□□□□ 0.42
LDB1-201ENST00000361198 URB1-AS1Q96HZ7 61 aa17.67■□□□□ 0.42
LDB1-201ENST00000361198 PIMREGQ9BSJ6 248 aa17.67■□□□□ 0.42
LDB1-201ENST00000361198 TRBV19A0A075B6N1 114 aa17.67■□□□□ 0.42
LDB1-201ENST00000361198 TRBV6-1A0A0K0K1D8 114 aa17.67■□□□□ 0.42
LDB1-201ENST00000361198 M0R2Z0 102 aa17.67■□□□□ 0.42
LDB1-201ENST00000361198 G0S2P27469 103 aa17.67■□□□□ 0.42
LDB1-201ENST00000361198 PAX8Q06710 450 aa17.67■□□□□ 0.42
LDB1-201ENST00000361198 FAM162BQ5T6X4 162 aa17.67■□□□□ 0.42
LDB1-201ENST00000361198 EBLN2Q6P2I7 272 aa17.67■□□□□ 0.42
LDB1-201ENST00000361198 KLHDC1Q8N7A1 406 aa17.67■□□□□ 0.42
LDB1-201ENST00000361198 DAZAP1Q96EP5 407 aaKnown RBP17.67■□□□□ 0.42
LDB1-201ENST00000361198 TMUB1Q9BVT8 246 aa17.67■□□□□ 0.42
LDB1-201ENST00000361198 USP24Q9UPU5 2620 aa17.66■□□□□ 0.42
LDB1-201ENST00000361198 C2orf70A6NJV1 201 aa17.66■□□□□ 0.42
LDB1-201ENST00000361198 CRYBG3Q68DQ2 2970 aa17.66■□□□□ 0.42
LDB1-201ENST00000361198 OR2T8A6NH00 312 aa17.65■□□□□ 0.42
LDB1-201ENST00000361198 MRPS12O15235 138 aaKnown RBP17.65■□□□□ 0.42
LDB1-201ENST00000361198 LCN12Q6JVE5 192 aa17.65■□□□□ 0.42
LDB1-201ENST00000361198 RNASEKQ6P5S7 137 aaKnown RBP17.65■□□□□ 0.42
LDB1-201ENST00000361198 C16orf54Q6UWD8 224 aa17.65■□□□□ 0.42
LDB1-201ENST00000361198 OR4F17Q8NGA8 305 aa17.65■□□□□ 0.42
LDB1-201ENST00000361198 IGHV3OR16-10A0A075B7F0 116 aa17.65■□□□□ 0.42
LDB1-201ENST00000361198 TRAV8-1A0A0A6YYK1 113 aa17.65■□□□□ 0.42
LDB1-201ENST00000361198 ATP6V0E1O15342 81 aa17.65■□□□□ 0.42
LDB1-201ENST00000361198 BTF3P20290 206 aaKnown RBP17.65■□□□□ 0.42
LDB1-201ENST00000361198 ECSCRQ19T08 205 aa17.65■□□□□ 0.42
LDB1-201ENST00000361198 C10orf105Q8TEF2 133 aa17.65■□□□□ 0.42
LDB1-201ENST00000361198 TMEM208Q9BTX3 173 aa17.65■□□□□ 0.42
LDB1-201ENST00000361198 UTP20O75691 2785 aaKnown RBP17.65■□□□□ 0.42
LDB1-201ENST00000361198 SH2D7A6NKC9 451 aaPredicted RBP17.64■□□□□ 0.41
LDB1-201ENST00000361198 PGLYRP4Q96LB8 373 aa17.64■□□□□ 0.41
LDB1-201ENST00000361198 CTSGP08311 255 aa17.64■□□□□ 0.41
LDB1-201ENST00000361198 GAGE1Q13065 139 aa17.64■□□□□ 0.41
LDB1-201ENST00000361198 UNQ5815/PRO19632Q6UWF5 114 aa17.64■□□□□ 0.41
LDB1-201ENST00000361198 GOSR1O95249 250 aa17.63■□□□□ 0.41
LDB1-201ENST00000361198 FOXA3P55318 350 aaPredicted RBP17.63■□□□□ 0.41
LDB1-201ENST00000361198 GOLT1AQ6ZVE7 132 aa17.63■□□□□ 0.41
LDB1-201ENST00000361198 RNF24Q9Y225 148 aa17.63■□□□□ 0.41
LDB1-201ENST00000361198 CELSR2Q9HCU4 2923 aa17.63■□□□□ 0.41
LDB1-201ENST00000361198 LINC01548A6NM66 108 aa17.63■□□□□ 0.41
LDB1-201ENST00000361198 DLEU1O43261 78 aa17.63■□□□□ 0.41
LDB1-201ENST00000361198 COL5A1-AS1Q5SY13 56 aa17.63■□□□□ 0.41
LDB1-201ENST00000361198 SIGLEC15Q6ZMC9 328 aa17.63■□□□□ 0.41
LDB1-201ENST00000361198 FAM110DQ8TAY7 271 aaPredicted RBP17.63■□□□□ 0.41
LDB1-201ENST00000361198 APOHP02749 345 aaPredicted RBP17.62■□□□□ 0.41
LDB1-201ENST00000361198 COL8A1P27658 744 aa17.62■□□□□ 0.41
LDB1-201ENST00000361198 ATP5J2P56134 94 aa17.62■□□□□ 0.41
LDB1-201ENST00000361198 CIARTQ8N365 385 aaPredicted RBP17.62■□□□□ 0.41
LDB1-201ENST00000361198 ZNF414Q96IQ9 312 aa17.62■□□□□ 0.41
LDB1-201ENST00000361198 C20orf202A1L168 122 aa17.61■□□□□ 0.41
LDB1-201ENST00000361198 CHCHD1Q96BP2 118 aaKnown RBP17.61■□□□□ 0.41
LDB1-201ENST00000361198 TXN2Q99757 166 aa17.61■□□□□ 0.41
LDB1-201ENST00000361198 NDFIP1Q9BT67 221 aa17.61■□□□□ 0.41
LDB1-201ENST00000361198 TRAV9-2A0A087WT02 112 aa17.61■□□□□ 0.41
LDB1-201ENST00000361198 ZNF785A8K8V0 405 aa17.61■□□□□ 0.41
LDB1-201ENST00000361198 PRB4P10163 310 aaPredicted RBP17.61■□□□□ 0.41
LDB1-201ENST00000361198 Q6ZN92 141 aa17.61■□□□□ 0.41
LDB1-201ENST00000361198 ATOH7Q8N100 152 aa17.61■□□□□ 0.41
LDB1-201ENST00000361198 G3V318 75 aa17.6■□□□□ 0.41
LDB1-201ENST00000361198 HAX1O00165 279 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 248.1 ms