RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 FAM74A7A6NL05 159 aa16.61■□□□□ 0.25
HOXA4-201ENST00000360046 M0QZ24 198 aa16.61■□□□□ 0.25
HOXA4-201ENST00000360046 FOLR2P14207 255 aa16.61■□□□□ 0.25
HOXA4-201ENST00000360046 TAGLN2P37802 199 aaKnown RBP16.61■□□□□ 0.25
HOXA4-201ENST00000360046 C17orf77Q96MU5 243 aa16.61■□□□□ 0.25
HOXA4-201ENST00000360046 C11orf94C9JXX5 98 aa16.6■□□□□ 0.25
HOXA4-201ENST00000360046 PF4P02776 101 aa16.6■□□□□ 0.25
HOXA4-201ENST00000360046 RANP62826 216 aaKnown RBP16.6■□□□□ 0.25
HOXA4-201ENST00000360046 RPL11P62913 178 aaKnown RBP16.6■□□□□ 0.25
HOXA4-201ENST00000360046 MEF2BQ02080 365 aaPredicted RBP16.6■□□□□ 0.25
HOXA4-201ENST00000360046 LINC00052Q96N35 136 aa16.6■□□□□ 0.25
HOXA4-201ENST00000360046 COL6A5A8TX70 2615 aa16.6■□□□□ 0.25
HOXA4-201ENST00000360046 TRBV19A0A075B6N1 114 aa16.59■□□□□ 0.25
HOXA4-201ENST00000360046 OVOL1O14753 267 aa16.59■□□□□ 0.25
HOXA4-201ENST00000360046 ATP5G3P48201 142 aa16.59■□□□□ 0.25
HOXA4-201ENST00000360046 ARL2-SNX15V9GYD0 113 aa16.59■□□□□ 0.25
HOXA4-201ENST00000360046 STAB1Q9NY15 2570 aa16.59■□□□□ 0.25
HOXA4-201ENST00000360046 CD5P06127 495 aa16.59■□□□□ 0.25
HOXA4-201ENST00000360046 VWFP04275 2813 aa16.58■□□□□ 0.24
HOXA4-201ENST00000360046 A0A1W2PRE2 83 aa16.58■□□□□ 0.24
HOXA4-201ENST00000360046 HELTA6NFD8 242 aa16.58■□□□□ 0.24
HOXA4-201ENST00000360046 SLC17A3O00476 420 aa16.58■□□□□ 0.24
HOXA4-201ENST00000360046 GGTLC3B5MD39 225 aa16.57■□□□□ 0.24
HOXA4-201ENST00000360046 KRTAP21-3Q3LHN1 58 aa16.57■□□□□ 0.24
HOXA4-201ENST00000360046 TCF24Q7RTU0 167 aa16.57■□□□□ 0.24
HOXA4-201ENST00000360046 IGKV3-7A0A075B6H7 116 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 A0A087X0K7 114 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 NDUFB4O95168 129 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 CSN3P07498 182 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 CD81P60033 236 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 PDE6HQ13956 83 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 SHISA2Q6UWI4 295 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 ADAMTSL5Q6ZMM2 481 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 Q9H3A6 140 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 MLXQ9UH92 298 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 C9JQL5 133 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 SUMO1P63165 101 aaKnown RBP16.56■□□□□ 0.24
HOXA4-201ENST00000360046 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 DYNLRB2Q8TF09 96 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 TXNDC17Q9BRA2 123 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 SMDT1Q9H4I9 107 aa16.56■□□□□ 0.24
HOXA4-201ENST00000360046 TMA7Q9Y2S6 64 aaKnown RBP16.56■□□□□ 0.24
HOXA4-201ENST00000360046 CEBPGP53567 150 aa16.55■□□□□ 0.24
HOXA4-201ENST00000360046 EXOC3-AS1Q8N2X6 119 aa16.55■□□□□ 0.24
HOXA4-201ENST00000360046 NKX6-2Q9C056 277 aaPredicted RBP16.55■□□□□ 0.24
HOXA4-201ENST00000360046 PGPA6NDG6 321 aa16.54■□□□□ 0.24
HOXA4-201ENST00000360046 MEOX2P50222 304 aa16.54■□□□□ 0.24
HOXA4-201ENST00000360046 PSG9Q00887 426 aa16.53■□□□□ 0.24
HOXA4-201ENST00000360046 MDFIQ99750 246 aa16.53■□□□□ 0.24
HOXA4-201ENST00000360046 SLC35B3Q9H1N7 401 aa16.53■□□□□ 0.24
HOXA4-201ENST00000360046 AAMDCQ9H7C9 122 aa16.53■□□□□ 0.24
HOXA4-201ENST00000360046 NRN1Q9NPD7 142 aa16.53■□□□□ 0.24
HOXA4-201ENST00000360046 OTORQ9NRC9 128 aa16.53■□□□□ 0.24
HOXA4-201ENST00000360046 PDE6DO43924 150 aa16.53■□□□□ 0.24
HOXA4-201ENST00000360046 SRP19P09132 144 aaKnown RBP16.53■□□□□ 0.24
HOXA4-201ENST00000360046 SFTA3P0C7M3 94 aa16.53■□□□□ 0.24
HOXA4-201ENST00000360046 LYPD1Q8N2G4 141 aa16.53■□□□□ 0.24
HOXA4-201ENST00000360046 GBGT1Q8N5D6 347 aa16.53■□□□□ 0.24
HOXA4-201ENST00000360046 CYB561D1Q8N8Q1 229 aa16.53■□□□□ 0.24
HOXA4-201ENST00000360046 ZNF253O75346 499 aa16.52■□□□□ 0.24
HOXA4-201ENST00000360046 SLC25A5P05141 298 aaKnown RBP16.52■□□□□ 0.24
HOXA4-201ENST00000360046 IGFL4Q6B9Z1 124 aa16.52■□□□□ 0.24
HOXA4-201ENST00000360046 LINC00482Q8N8I6 264 aa16.52■□□□□ 0.24
HOXA4-201ENST00000360046 SLC50A1Q9BRV3 221 aa16.52■□□□□ 0.24
HOXA4-201ENST00000360046 ZNF331Q9NQX6 463 aaPredicted RBP16.52■□□□□ 0.24
HOXA4-201ENST00000360046 F6UZH7 168 aa16.51■□□□□ 0.23
HOXA4-201ENST00000360046 FAM90A2PQ658T7 463 aa16.51■□□□□ 0.23
HOXA4-201ENST00000360046 C16orf92Q96LL3 132 aa16.51■□□□□ 0.23
HOXA4-201ENST00000360046 RPH3ALQ9UNE2 315 aa16.51■□□□□ 0.23
HOXA4-201ENST00000360046 SCO2A0A1W2PP80 73 aa16.5■□□□□ 0.23
HOXA4-201ENST00000360046 SAP30O75446 220 aa16.5■□□□□ 0.23
HOXA4-201ENST00000360046 SCO1O75880 301 aa16.5■□□□□ 0.23
HOXA4-201ENST00000360046 CMTM2Q8TAZ6 248 aa16.5■□□□□ 0.23
HOXA4-201ENST00000360046 TMEM218A2RU14 115 aa16.5■□□□□ 0.23
HOXA4-201ENST00000360046 GNG5P63218 68 aa16.5■□□□□ 0.23
HOXA4-201ENST00000360046 C5orf17Q8NAS9 161 aa16.5■□□□□ 0.23
HOXA4-201ENST00000360046 TMEM250H0YL14 139 aa16.49■□□□□ 0.23
HOXA4-201ENST00000360046 TFPI2P48307 235 aa16.49■□□□□ 0.23
HOXA4-201ENST00000360046 RBPMS2Q6ZRY4 209 aaKnown RBP16.49■□□□□ 0.23
HOXA4-201ENST00000360046 WFDC3Q8IUB2 231 aa16.49■□□□□ 0.23
HOXA4-201ENST00000360046 RNF182Q8N6D2 247 aa16.49■□□□□ 0.23
HOXA4-201ENST00000360046 MS4A6AQ9H2W1 248 aa16.49■□□□□ 0.23
HOXA4-201ENST00000360046 M0R3E3 92 aa16.48■□□□□ 0.23
HOXA4-201ENST00000360046 DNASE2O00115 360 aaPredicted RBP16.48■□□□□ 0.23
HOXA4-201ENST00000360046 HLA-DMBP28068 263 aa16.48■□□□□ 0.23
HOXA4-201ENST00000360046 DEFB114Q30KQ6 69 aa16.48■□□□□ 0.23
HOXA4-201ENST00000360046 RPUSD4Q96CM3 377 aaKnown RBP16.48■□□□□ 0.23
HOXA4-201ENST00000360046 SIGLEC8Q9NYZ4 499 aa16.48■□□□□ 0.23
HOXA4-201ENST00000360046 TRAV8-2A0A0B4J237 113 aa16.48■□□□□ 0.23
HOXA4-201ENST00000360046 TMEM61Q8N0U2 210 aa16.48■□□□□ 0.23
HOXA4-201ENST00000360046 TCEAL7Q9BRU2 100 aa16.48■□□□□ 0.23
HOXA4-201ENST00000360046 EPDR1Q9UM22 224 aa16.48■□□□□ 0.23
HOXA4-201ENST00000360046 PEX7O00628 323 aa16.47■□□□□ 0.23
HOXA4-201ENST00000360046 SOCS3O14543 225 aa16.47■□□□□ 0.23
HOXA4-201ENST00000360046 APOC3P02656 99 aa16.47■□□□□ 0.23
HOXA4-201ENST00000360046 PRB4P10163 310 aaPredicted RBP16.47■□□□□ 0.23
HOXA4-201ENST00000360046 ZNF674Q2M3X9 581 aa16.47■□□□□ 0.23
HOXA4-201ENST00000360046 CD300EQ496F6 205 aaPredicted RBP16.47■□□□□ 0.23
HOXA4-201ENST00000360046 SOHLH1Q5JUK2 328 aa16.47■□□□□ 0.23
HOXA4-201ENST00000360046 F8W036 122 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms