RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 GNG4P50150 75 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 FAM3BP58499 235 aaPredicted RBP6.36□□□□□ -1.39
CD44-205ENST00000352818 SUMO1P63165 101 aaKnown RBP6.36□□□□□ -1.39
CD44-205ENST00000352818 BRD3OSQ6XYD6 125 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 ZFP82Q8N141 532 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 TMEM86BQ8N661 226 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 C5orf56Q8N8D9 126 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 OCC1Q8TAD7 63 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 ATP6V0BQ99437 205 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 SHANK2-AS3Q9BTD1 123 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 FAM103A1Q9BTL3 118 aaKnown RBP6.36□□□□□ -1.39
CD44-205ENST00000352818 SLC25A39Q9BZJ4 359 aaPredicted RBP6.36□□□□□ -1.39
CD44-205ENST00000352818 SAV1Q9H4B6 383 aaPredicted RBP6.36□□□□□ -1.39
CD44-205ENST00000352818 C21orf62Q9NYP8 219 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 MOB4Q9Y3A3 225 aa6.36□□□□□ -1.39
CD44-205ENST00000352818 TRBV9A0A0B4J1U6 114 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 IGHV3-21A0A0B4J1V1 117 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 HELTA6NFD8 242 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 K7EN84 100 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 PEX7O00628 323 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 GCGP01275 180 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 S100A6P06703 90 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 NBEAP1P0C6P0 100 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 HIST1H1EP10412 219 aaKnown RBP6.35□□□□□ -1.39
CD44-205ENST00000352818 S100A7P31151 101 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 CNN1P51911 297 aaKnown RBP6.35□□□□□ -1.39
CD44-205ENST00000352818 RPL15P61313 204 aaKnown RBP6.35□□□□□ -1.39
CD44-205ENST00000352818 LYZP61626 148 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 SMUG1Q53HV7 270 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 CENPWQ5EE01 88 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 ZFAND6Q6FIF0 208 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 C5orf17Q8NAS9 161 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 WFDC9Q8NEX5 89 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 OR10G8Q8NGN5 311 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 RNF125Q96EQ8 232 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 OSTCQ9NRP0 149 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 KLF12Q9Y4X4 402 aa6.35□□□□□ -1.39
CD44-205ENST00000352818 TRAV40A0A0B4J280 105 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 TRBV6-1A0A0K0K1D8 114 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 PGPEP1LA6NFU8 196 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 ADARB2-AS1A8MUL3 147 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 PPP5D1E7EU14 171 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 ISLRO14498 428 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 ATP6V0E1O15342 81 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 GNG7O60262 68 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 BRI3O95415 125 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 IGLV2-8P01709 118 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 IGHV4-59P01825 116 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 S100A8P05109 93 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 TMEM183BQ1AE95 376 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 C19orf54Q5BKX5 351 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 FAM231DQ6ZW35 169 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 BPIFA4PQ86YQ2 179 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 LYPD1Q8N2G4 141 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 ZNF491Q8N8L2 437 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 NECAP1Q8NC96 275 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 ZNF502Q8TBZ5 544 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 PIFOQ8TCI5 191 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 HSPB9Q9BQS6 159 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 ATG101Q9BSB4 218 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 OTORQ9NRC9 128 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 IL36BQ9NZH7 164 aa6.34□□□□□ -1.39
CD44-205ENST00000352818 PKHD1P08F94 4074 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 A0A1W2PPQ1 181 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 M0QZK8 103 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 MRPS12O15235 138 aaKnown RBP6.33□□□□□ -1.4
CD44-205ENST00000352818 HIST1H2BKO60814 126 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 NDUFB8O95169 186 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 TRGC2P03986 189 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 HIST1H2BJP06899 126 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 IGLC2P0DOY2 106 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 HIST1H2BOP23527 126 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 HIST1H2BBP33778 126 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 HIST1H2BDP58876 126 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 SNRPEP62304 92 aaKnown RBP6.33□□□□□ -1.4
CD44-205ENST00000352818 HIST1H2BCP62807 126 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 EGFEM1PQ0D2K5 195 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 PDE6HQ13956 83 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 HIST2H2BEQ16778 126 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 Q56UQ5 140 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 ACTL10Q5JWF8 245 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.33□□□□□ -1.4
CD44-205ENST00000352818 UNQ5815/PRO19632Q6UWF5 114 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 ZNF600Q6ZNG1 722 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 ARL6IP6Q8N6S5 226 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 OR5T1Q8NG75 326 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 HIST1H2BHQ93079 126 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 FMC1Q96HJ9 113 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 HIST1H2BNQ99877 126 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 HIST1H2BMQ99879 126 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 FBXL7Q9UJT9 491 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 ZNF580Q9UK33 172 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 EPDR1Q9UM22 224 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 V9GYV3 84 aa6.33□□□□□ -1.4
CD44-205ENST00000352818 TRBV19A0A075B6N1 114 aa6.32□□□□□ -1.4
CD44-205ENST00000352818 A0A0U1RQK1 487 aa6.32□□□□□ -1.4
CD44-205ENST00000352818 A6NDX4 124 aa6.32□□□□□ -1.4
CD44-205ENST00000352818 H3BUA1 57 aa6.32□□□□□ -1.4
CD44-205ENST00000352818 ZNF253O75346 499 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms