RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 LOC102724200A0A096LPH7 203 aaPredicted RBP17.32■□□□□ 0.36
UPF3A-201ENST00000351487 IGHV7-81A0A0B4J1V7 117 aa17.32■□□□□ 0.36
UPF3A-201ENST00000351487 NDUFB8O95169 186 aa17.32■□□□□ 0.36
UPF3A-201ENST00000351487 EGR2P11161 476 aaPredicted RBP17.32■□□□□ 0.36
UPF3A-201ENST00000351487 SPATA45Q537H7 98 aa17.32■□□□□ 0.36
UPF3A-201ENST00000351487 NDFIP1Q9BT67 221 aa17.32■□□□□ 0.36
UPF3A-201ENST00000351487 AAMDCQ9H7C9 122 aa17.32■□□□□ 0.36
UPF3A-201ENST00000351487 SERTM2A0A1B0GWG4 89 aa17.32■□□□□ 0.36
UPF3A-201ENST00000351487 SH2D7A6NKC9 451 aaPredicted RBP17.32■□□□□ 0.36
UPF3A-201ENST00000351487 M0R3E3 92 aa17.32■□□□□ 0.36
UPF3A-201ENST00000351487 CHCHD1Q96BP2 118 aaKnown RBP17.32■□□□□ 0.36
UPF3A-201ENST00000351487 IGHV2-70DA0A0C4DH43 119 aa17.31■□□□□ 0.36
UPF3A-201ENST00000351487 CHEK1O14757 476 aa17.31■□□□□ 0.36
UPF3A-201ENST00000351487 NDUFS7O75251 213 aa17.31■□□□□ 0.36
UPF3A-201ENST00000351487 PMCHL1Q16048 86 aa17.31■□□□□ 0.36
UPF3A-201ENST00000351487 Q8N9W7 124 aa17.31■□□□□ 0.36
UPF3A-201ENST00000351487 GATD1Q8NB37 220 aa17.31■□□□□ 0.36
UPF3A-201ENST00000351487 COL6A6A6NMZ7 2263 aa17.31■□□□□ 0.36
UPF3A-201ENST00000351487 HIVEP3Q5T1R4 2406 aa17.31■□□□□ 0.36
UPF3A-201ENST00000351487 WNK2Q9Y3S1 2297 aa17.31■□□□□ 0.36
UPF3A-201ENST00000351487 C2orf70A6NJV1 201 aa17.31■□□□□ 0.36
UPF3A-201ENST00000351487 SCGB2A1O75556 95 aa17.31■□□□□ 0.36
UPF3A-201ENST00000351487 EBLN2Q6P2I7 272 aa17.31■□□□□ 0.36
UPF3A-201ENST00000351487 PRR31Q5SQ13 230 aa17.3■□□□□ 0.36
UPF3A-201ENST00000351487 ARL6IP6Q8N6S5 226 aa17.3■□□□□ 0.36
UPF3A-201ENST00000351487 TXN2Q99757 166 aa17.3■□□□□ 0.36
UPF3A-201ENST00000351487 C1RLQ9NZP8 487 aa17.3■□□□□ 0.36
UPF3A-201ENST00000351487 SPTBN1Q01082 2364 aaKnown RBP17.29■□□□□ 0.36
UPF3A-201ENST00000351487 A0A1B0GUT8 65 aa17.29■□□□□ 0.36
UPF3A-201ENST00000351487 RPL7P18124 248 aaKnown RBP17.29■□□□□ 0.36
UPF3A-201ENST00000351487 BTF3P20290 206 aaKnown RBP17.29■□□□□ 0.36
UPF3A-201ENST00000351487 CRIP1P50238 77 aa17.29■□□□□ 0.36
UPF3A-201ENST00000351487 PSG9Q00887 426 aa17.29■□□□□ 0.36
UPF3A-201ENST00000351487 DMRTA1Q5VZB9 504 aa17.29■□□□□ 0.36
UPF3A-201ENST00000351487 CTSGP08311 255 aa17.29■□□□□ 0.36
UPF3A-201ENST00000351487 FAM106CPP0CH98 169 aa17.29■□□□□ 0.36
UPF3A-201ENST00000351487 UBE2E1P51965 193 aa17.29■□□□□ 0.36
UPF3A-201ENST00000351487 FAM120AOSQ5T036 256 aa17.29■□□□□ 0.36
UPF3A-201ENST00000351487 Q6AWC8 147 aa17.29■□□□□ 0.36
UPF3A-201ENST00000351487 EFNA4P52798 201 aa17.28■□□□□ 0.36
UPF3A-201ENST00000351487 KLK9Q2XQG4 91 aa17.28■□□□□ 0.36
UPF3A-201ENST00000351487 AJUBAQ96IF1 538 aa17.28■□□□□ 0.36
UPF3A-201ENST00000351487 KLK9Q9UKQ9 250 aa17.28■□□□□ 0.36
UPF3A-201ENST00000351487 A0A1B0GW15 77 aa17.28■□□□□ 0.36
UPF3A-201ENST00000351487 OR2T8A6NH00 312 aa17.28■□□□□ 0.36
UPF3A-201ENST00000351487 LCN12Q6JVE5 192 aa17.28■□□□□ 0.36
UPF3A-201ENST00000351487 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.27■□□□□ 0.36
UPF3A-201ENST00000351487 IGLC3P0DOY3 106 aa17.27■□□□□ 0.36
UPF3A-201ENST00000351487 CSN1S1P47710 185 aa17.27■□□□□ 0.36
UPF3A-201ENST00000351487 RIGQ13278 110 aa17.27■□□□□ 0.36
UPF3A-201ENST00000351487 UQCR10Q9UDW1 63 aa17.27■□□□□ 0.36
UPF3A-201ENST00000351487 IGHV3-23P01764 117 aa17.27■□□□□ 0.35
UPF3A-201ENST00000351487 ARMS2P0C7Q2 107 aa17.27■□□□□ 0.35
UPF3A-201ENST00000351487 COX8CQ7Z4L0 72 aa17.27■□□□□ 0.35
UPF3A-201ENST00000351487 ASCL2Q99929 193 aa17.27■□□□□ 0.35
UPF3A-201ENST00000351487 UBTD1Q9HAC8 227 aa17.27■□□□□ 0.35
UPF3A-201ENST00000351487 TCAPO15273 167 aa17.26■□□□□ 0.35
UPF3A-201ENST00000351487 CT45A10P0DMU9 189 aa17.26■□□□□ 0.35
UPF3A-201ENST00000351487 CYB5R2Q6BCY4 276 aa17.26■□□□□ 0.35
UPF3A-201ENST00000351487 KLHDC1Q8N7A1 406 aa17.26■□□□□ 0.35
UPF3A-201ENST00000351487 FAM110DQ8TAY7 271 aaPredicted RBP17.26■□□□□ 0.35
UPF3A-201ENST00000351487 C8orf49Q96NF6 230 aa17.25■□□□□ 0.35
UPF3A-201ENST00000351487 RABAC1Q9UI14 185 aa17.25■□□□□ 0.35
UPF3A-201ENST00000351487 IGHV1-24A0A0C4DH33 117 aa17.25■□□□□ 0.35
UPF3A-201ENST00000351487 M0QZ24 198 aa17.25■□□□□ 0.35
UPF3A-201ENST00000351487 CRXO43186 299 aaPredicted RBP17.25■□□□□ 0.35
UPF3A-201ENST00000351487 LINC00614P0C842 121 aa17.25■□□□□ 0.35
UPF3A-201ENST00000351487 FBLL1A6NHQ2 334 aaKnown RBP17.24■□□□□ 0.35
UPF3A-201ENST00000351487 TMEM70Q9BUB7 260 aa17.24■□□□□ 0.35
UPF3A-201ENST00000351487 SFTPCP11686 197 aa17.24■□□□□ 0.35
UPF3A-201ENST00000351487 S100A7P31151 101 aa17.24■□□□□ 0.35
UPF3A-201ENST00000351487 LY6DQ14210 128 aa17.24■□□□□ 0.35
UPF3A-201ENST00000351487 C20orf202A1L168 122 aa17.23■□□□□ 0.35
UPF3A-201ENST00000351487 RPLP1P05386 114 aaKnown RBP17.23■□□□□ 0.35
UPF3A-201ENST00000351487 SAA4P35542 130 aa17.23■□□□□ 0.35
UPF3A-201ENST00000351487 LMO4P61968 165 aa17.23■□□□□ 0.35
UPF3A-201ENST00000351487 CLEC5AQ9NY25 188 aa17.23■□□□□ 0.35
UPF3A-201ENST00000351487 TRAV9-2A0A087WT02 112 aa17.23■□□□□ 0.35
UPF3A-201ENST00000351487 PRB4P10163 310 aaPredicted RBP17.23■□□□□ 0.35
UPF3A-201ENST00000351487 ATOH7Q8N100 152 aa17.23■□□□□ 0.35
UPF3A-201ENST00000351487 ZNF502Q8TBZ5 544 aa17.23■□□□□ 0.35
UPF3A-201ENST00000351487 LPAR2Q9HBW0 351 aa17.23■□□□□ 0.35
UPF3A-201ENST00000351487 ITLN2Q8WWU7 325 aaPredicted RBP17.22■□□□□ 0.35
UPF3A-201ENST00000351487 SMAD5-AS1Q9Y6J3 95 aa17.22■□□□□ 0.35
UPF3A-201ENST00000351487 SAPCD1Q5SSQ6 148 aa17.21■□□□□ 0.35
UPF3A-201ENST00000351487 BPESC1Q9GZL8 116 aa17.21■□□□□ 0.35
UPF3A-201ENST00000351487 OR5AL1P0C617 328 aa17.21■□□□□ 0.35
UPF3A-201ENST00000351487 UNQ5815/PRO19632Q6UWF5 114 aa17.21■□□□□ 0.35
UPF3A-201ENST00000351487 ZNF493Q6ZR52 646 aa17.21■□□□□ 0.35
UPF3A-201ENST00000351487 SPATA12Q7Z6I5 190 aa17.21■□□□□ 0.35
UPF3A-201ENST00000351487 TMUB1Q9BVT8 246 aa17.21■□□□□ 0.35
UPF3A-201ENST00000351487 SPTBN4Q9H254 2564 aa17.2■□□□□ 0.34
UPF3A-201ENST00000351487 IGKV2-40A0A087WW87 121 aaPredicted RBP17.2■□□□□ 0.34
UPF3A-201ENST00000351487 ATP6V0E1O15342 81 aa17.2■□□□□ 0.34
UPF3A-201ENST00000351487 IGKV2D-40P01614 121 aaPredicted RBP17.2■□□□□ 0.34
UPF3A-201ENST00000351487 C15orf32Q32M92 178 aa17.2■□□□□ 0.34
UPF3A-201ENST00000351487 MAJINQ3KP22 176 aa17.2■□□□□ 0.34
UPF3A-201ENST00000351487 MED13LQ71F56 2210 aa17.2■□□□□ 0.34
UPF3A-201ENST00000351487 SH2D1AO60880 128 aa17.2■□□□□ 0.34
UPF3A-201ENST00000351487 LEPROTL1O95214 131 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms