RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 YTHDF2Q9Y5A9 579 aaKnown RBP20.38■□□□□ 0.85
SSBP4-202ENST00000348495 ARL2-SNX15V9GYD0 113 aa20.38■□□□□ 0.85
SSBP4-202ENST00000348495 ZNF253O75346 499 aa20.37■□□□□ 0.85
SSBP4-202ENST00000348495 RPL11P62913 178 aaKnown RBP20.37■□□□□ 0.85
SSBP4-202ENST00000348495 CD300EQ496F6 205 aaPredicted RBP20.37■□□□□ 0.85
SSBP4-202ENST00000348495 TMEM61Q8N0U2 210 aa20.37■□□□□ 0.85
SSBP4-202ENST00000348495 LINC00862A6NCI5 91 aa20.36■□□□□ 0.85
SSBP4-202ENST00000348495 FAM74A7A6NL05 159 aa20.36■□□□□ 0.85
SSBP4-202ENST00000348495 IGLV1-51P01701 117 aa20.36■□□□□ 0.85
SSBP4-202ENST00000348495 KRTAP21-3Q3LHN1 58 aa20.36■□□□□ 0.85
SSBP4-202ENST00000348495 FAM210AQ96ND0 272 aa20.36■□□□□ 0.85
SSBP4-202ENST00000348495 A0A1W2PRE2 83 aa20.36■□□□□ 0.85
SSBP4-202ENST00000348495 SOCS3O14543 225 aa20.36■□□□□ 0.85
SSBP4-202ENST00000348495 PAGE4O60829 102 aa20.36■□□□□ 0.85
SSBP4-202ENST00000348495 BCL2P10415 239 aa20.36■□□□□ 0.85
SSBP4-202ENST00000348495 UBE2G2P60604 165 aa20.36■□□□□ 0.85
SSBP4-202ENST00000348495 DCANP1Q8TF63 244 aa20.36■□□□□ 0.85
SSBP4-202ENST00000348495 MS4A6AQ9H2W1 248 aa20.36■□□□□ 0.85
SSBP4-202ENST00000348495 CD33P20138 364 aa20.35■□□□□ 0.85
SSBP4-202ENST00000348495 ZNF331Q9NQX6 463 aaPredicted RBP20.35■□□□□ 0.85
SSBP4-202ENST00000348495 IGKV3-7A0A075B6H7 116 aa20.34■□□□□ 0.85
SSBP4-202ENST00000348495 TRAV25A0A0B4J276 109 aa20.34■□□□□ 0.85
SSBP4-202ENST00000348495 TSPAN4O14817 238 aa20.34■□□□□ 0.85
SSBP4-202ENST00000348495 IFNA1P01562 189 aa20.34■□□□□ 0.85
SSBP4-202ENST00000348495 RANP62826 216 aaKnown RBP20.34■□□□□ 0.85
SSBP4-202ENST00000348495 HAGHQ16775 308 aa20.34■□□□□ 0.85
SSBP4-202ENST00000348495 LOC102723971A0A1B0GUV8 181 aa20.33■□□□□ 0.85
SSBP4-202ENST00000348495 RBFOX3A6NFN3 312 aa20.33■□□□□ 0.85
SSBP4-202ENST00000348495 LYPD1Q8N2G4 141 aa20.33■□□□□ 0.85
SSBP4-202ENST00000348495 RARRES2Q99969 163 aa20.33■□□□□ 0.85
SSBP4-202ENST00000348495 TRRAPQ9Y4A5 3859 aa20.33■□□□□ 0.84
SSBP4-202ENST00000348495 TRAV8-2A0A0B4J237 113 aa20.33■□□□□ 0.84
SSBP4-202ENST00000348495 GGTLC3B5MD39 225 aa20.33■□□□□ 0.84
SSBP4-202ENST00000348495 INSL3P51460 131 aa20.33■□□□□ 0.84
SSBP4-202ENST00000348495 RBPMS2Q6ZRY4 209 aaKnown RBP20.33■□□□□ 0.84
SSBP4-202ENST00000348495 GBGT1Q8N5D6 347 aa20.33■□□□□ 0.84
SSBP4-202ENST00000348495 SLC50A1Q9BRV3 221 aa20.33■□□□□ 0.84
SSBP4-202ENST00000348495 MCRIP2Q9BUT9 160 aaKnown RBP20.33■□□□□ 0.84
SSBP4-202ENST00000348495 Q9H3A6 140 aa20.33■□□□□ 0.84
SSBP4-202ENST00000348495 IZUMO1RA6ND01 250 aa20.32■□□□□ 0.84
SSBP4-202ENST00000348495 TAGLN2P37802 199 aaKnown RBP20.32■□□□□ 0.84
SSBP4-202ENST00000348495 PSG9Q00887 426 aa20.32■□□□□ 0.84
SSBP4-202ENST00000348495 ZNF506Q5JVG8 444 aa20.32■□□□□ 0.84
SSBP4-202ENST00000348495 OR2K2Q8NGT1 345 aa20.32■□□□□ 0.84
SSBP4-202ENST00000348495 ANK2Q01484 3957 aa20.32■□□□□ 0.84
SSBP4-202ENST00000348495 C9orf66Q5T8R8 295 aa20.31■□□□□ 0.84
SSBP4-202ENST00000348495 CCDC28AQ8IWP9 274 aa20.31■□□□□ 0.84
SSBP4-202ENST00000348495 VAX2Q9UIW0 290 aa20.31■□□□□ 0.84
SSBP4-202ENST00000348495 TRAV2A0A0B4J234 112 aa20.3■□□□□ 0.84
SSBP4-202ENST00000348495 K7EQG2 157 aa20.3■□□□□ 0.84
SSBP4-202ENST00000348495 ATP5G3P48201 142 aa20.3■□□□□ 0.84
SSBP4-202ENST00000348495 ICAM4Q14773 271 aa20.3■□□□□ 0.84
SSBP4-202ENST00000348495 TOR2AQ5JU69 321 aa20.3■□□□□ 0.84
SSBP4-202ENST00000348495 CST9LP1Q5W188 147 aa20.3■□□□□ 0.84
SSBP4-202ENST00000348495 EXOC3-AS1Q8N2X6 119 aa20.3■□□□□ 0.84
SSBP4-202ENST00000348495 NKX6-2Q9C056 277 aaPredicted RBP20.3■□□□□ 0.84
SSBP4-202ENST00000348495 OTORQ9NRC9 128 aa20.3■□□□□ 0.84
SSBP4-202ENST00000348495 RAB19A4D1S5 217 aa20.3■□□□□ 0.84
SSBP4-202ENST00000348495 SAMD13Q5VXD3 122 aa20.3■□□□□ 0.84
SSBP4-202ENST00000348495 ISLRO14498 428 aa20.29■□□□□ 0.84
SSBP4-202ENST00000348495 PAFAH1B2P68402 229 aa20.29■□□□□ 0.84
SSBP4-202ENST00000348495 MEF2BQ02080 365 aaPredicted RBP20.29■□□□□ 0.84
SSBP4-202ENST00000348495 C16orf92Q96LL3 132 aa20.29■□□□□ 0.84
SSBP4-202ENST00000348495 SPAG8Q99932 426 aaPredicted RBP20.29■□□□□ 0.84
SSBP4-202ENST00000348495 C11orf94C9JXX5 98 aa20.28■□□□□ 0.84
SSBP4-202ENST00000348495 WIPF1O43516 503 aa20.28■□□□□ 0.84
SSBP4-202ENST00000348495 SUMO1P63165 101 aaKnown RBP20.28■□□□□ 0.84
SSBP4-202ENST00000348495 SRSF3P84103 164 aaKnown RBP20.28■□□□□ 0.84
SSBP4-202ENST00000348495 IGFL4Q6B9Z1 124 aa20.28■□□□□ 0.84
SSBP4-202ENST00000348495 TXNDC17Q9BRA2 123 aa20.28■□□□□ 0.84
SSBP4-202ENST00000348495 EIF5A2Q9GZV4 153 aaKnown RBP20.28■□□□□ 0.84
SSBP4-202ENST00000348495 PGPA6NDG6 321 aa20.27■□□□□ 0.84
SSBP4-202ENST00000348495 DNASE2O00115 360 aaPredicted RBP20.27■□□□□ 0.84
SSBP4-202ENST00000348495 TFPI2P48307 235 aa20.27■□□□□ 0.84
SSBP4-202ENST00000348495 CD81P60033 236 aa20.27■□□□□ 0.84
SSBP4-202ENST00000348495 COMMD7Q86VX2 200 aa20.27■□□□□ 0.84
SSBP4-202ENST00000348495 WFDC3Q8IUB2 231 aa20.27■□□□□ 0.84
SSBP4-202ENST00000348495 AAMDCQ9H7C9 122 aa20.27■□□□□ 0.84
SSBP4-202ENST00000348495 NOTCH3Q9UM47 2321 aa20.27■□□□□ 0.84
SSBP4-202ENST00000348495 IGLL1P15814 213 aa20.27■□□□□ 0.83
SSBP4-202ENST00000348495 HLA-DMBP28068 263 aa20.27■□□□□ 0.83
SSBP4-202ENST00000348495 RXFP4Q8TDU9 374 aa20.27■□□□□ 0.83
SSBP4-202ENST00000348495 ZNF256Q9Y2P7 627 aaPredicted RBP20.27■□□□□ 0.83
SSBP4-202ENST00000348495 LCN12Q6JVE5 192 aa20.26■□□□□ 0.83
SSBP4-202ENST00000348495 FAM24BQ8N5W8 94 aa20.26■□□□□ 0.83
SSBP4-202ENST00000348495 RNF182Q8N6D2 247 aa20.26■□□□□ 0.83
SSBP4-202ENST00000348495 CLEC5AQ9NY25 188 aa20.26■□□□□ 0.83
SSBP4-202ENST00000348495 PRR31Q5SQ13 230 aa20.25■□□□□ 0.83
SSBP4-202ENST00000348495 C20orf173Q96LM9 149 aa20.25■□□□□ 0.83
SSBP4-202ENST00000348495 M0R3E3 92 aa20.24■□□□□ 0.83
SSBP4-202ENST00000348495 EIF4E3Q8N5X7 224 aaKnown RBP20.24■□□□□ 0.83
SSBP4-202ENST00000348495 C5orf17Q8NAS9 161 aa20.24■□□□□ 0.83
SSBP4-202ENST00000348495 ID1P41134 155 aa20.24■□□□□ 0.83
SSBP4-202ENST00000348495 SMDT1Q9H4I9 107 aa20.24■□□□□ 0.83
SSBP4-202ENST00000348495 OR4C46A6NHA9 309 aa20.23■□□□□ 0.83
SSBP4-202ENST00000348495 C9JQL5 133 aa20.23■□□□□ 0.83
SSBP4-202ENST00000348495 NDUFS6O75380 124 aaKnown RBP20.23■□□□□ 0.83
SSBP4-202ENST00000348495 PEA15Q15121 130 aa20.23■□□□□ 0.83
SSBP4-202ENST00000348495 PSG3Q16557 428 aa20.23■□□□□ 0.83
SSBP4-202ENST00000348495 MRPL53Q96EL3 112 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms