RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 IGKV3D-11A0A0A0MRZ8 115 aa11.21□□□□□ -0.61
TRIO-202ENST00000344204 SMKR1H3BMG3 65 aa11.21□□□□□ -0.61
TRIO-202ENST00000344204 COL9A1P20849 921 aa11.21□□□□□ -0.61
TRIO-202ENST00000344204 PYGO2Q9BRQ0 406 aa11.21□□□□□ -0.61
TRIO-202ENST00000344204 H0YJW9 148 aa11.21□□□□□ -0.61
TRIO-202ENST00000344204 IGHV3-64A0A075B6Q5 118 aa11.21□□□□□ -0.61
TRIO-202ENST00000344204 NDUFC2O95298 119 aa11.21□□□□□ -0.61
TRIO-202ENST00000344204 TCRAP04437 139 aa11.21□□□□□ -0.61
TRIO-202ENST00000344204 NTF4P34130 210 aa11.21□□□□□ -0.61
TRIO-202ENST00000344204 CSRP2Q16527 193 aa11.21□□□□□ -0.61
TRIO-202ENST00000344204 TRGV9Q99603 122 aa11.21□□□□□ -0.61
TRIO-202ENST00000344204 EXOC3-AS1Q8N2X6 119 aa11.21□□□□□ -0.61
TRIO-202ENST00000344204 IGKV1-27A0A075B6S5 117 aa11.21□□□□□ -0.62
TRIO-202ENST00000344204 CD28P10747 220 aa11.21□□□□□ -0.62
TRIO-202ENST00000344204 RNF183Q96D59 192 aa11.21□□□□□ -0.62
TRIO-202ENST00000344204 CFHR2P36980 270 aa11.21□□□□□ -0.62
TRIO-202ENST00000344204 Q86TA4 180 aa11.21□□□□□ -0.62
TRIO-202ENST00000344204 C8orf46Q8TAG6 207 aa11.2□□□□□ -0.62
TRIO-202ENST00000344204 IGKV3D-15A0A087WSY6 115 aa11.2□□□□□ -0.62
TRIO-202ENST00000344204 IGKV3-15P01624 115 aa11.2□□□□□ -0.62
TRIO-202ENST00000344204 APOBEC3AP31941 199 aaPredicted RBP11.2□□□□□ -0.62
TRIO-202ENST00000344204 PVRIGQ6DKI7 326 aa11.2□□□□□ -0.62
TRIO-202ENST00000344204 CTSBP07858 339 aa11.2□□□□□ -0.62
TRIO-202ENST00000344204 ANXA2RQ3ZCQ2 193 aa11.2□□□□□ -0.62
TRIO-202ENST00000344204 PMS2CLQ68D20 193 aa11.2□□□□□ -0.62
TRIO-202ENST00000344204 TEN1Q86WV5 123 aa11.2□□□□□ -0.62
TRIO-202ENST00000344204 RNF125Q96EQ8 232 aa11.2□□□□□ -0.62
TRIO-202ENST00000344204 FAM231DQ6ZW35 169 aa11.2□□□□□ -0.62
TRIO-202ENST00000344204 TRAV40A0A0B4J280 105 aa11.19□□□□□ -0.62
TRIO-202ENST00000344204 PRO1854Q9UHT4 67 aa11.19□□□□□ -0.62
TRIO-202ENST00000344204 GFRA3O60609 400 aa11.19□□□□□ -0.62
TRIO-202ENST00000344204 TM4SF4P48230 202 aa11.19□□□□□ -0.62
TRIO-202ENST00000344204 ATP6V0E2Q8NHE4 81 aa11.19□□□□□ -0.62
TRIO-202ENST00000344204 SIT1Q9Y3P8 196 aa11.19□□□□□ -0.62
TRIO-202ENST00000344204 NEGR1Q7Z3B1 354 aa11.19□□□□□ -0.62
TRIO-202ENST00000344204 TRBV6-6A0A0A6YYG2 114 aa11.19□□□□□ -0.62
TRIO-202ENST00000344204 CRPP02741 224 aa11.19□□□□□ -0.62
TRIO-202ENST00000344204 FAM106CPP0CH98 169 aa11.19□□□□□ -0.62
TRIO-202ENST00000344204 NDUFV3P56181 108 aaKnown RBP11.19□□□□□ -0.62
TRIO-202ENST00000344204 SPACA3Q8IXA5 215 aa11.19□□□□□ -0.62
TRIO-202ENST00000344204 WFDC2Q14508 124 aa11.19□□□□□ -0.62
TRIO-202ENST00000344204 FAM90A1Q86YD7 464 aa11.19□□□□□ -0.62
TRIO-202ENST00000344204 DCTN5Q9BTE1 182 aa11.19□□□□□ -0.62
TRIO-202ENST00000344204 TMEM74BQ9NUR3 256 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 LEPROTO15243 131 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 NPC2P61916 151 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 ATP5G2Q06055 141 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 C21orf62Q9NYP8 219 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 IGKV1-12A0A0C4DH73 117 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 IGLL5B9A064 214 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 IGKV1D-12P01611 117 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 NPPCP23582 126 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 SNRPD3P62318 126 aaKnown RBP11.18□□□□□ -0.62
TRIO-202ENST00000344204 HAX1O00165 279 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 NUPR1O60356 82 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 SH2D1AO60880 128 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 GHRHP01286 108 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 Q6ZUT4 128 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 FGFBP3Q8TAT2 258 aa11.18□□□□□ -0.62
TRIO-202ENST00000344204 SPEM2Q0P670 501 aa11.17□□□□□ -0.62
TRIO-202ENST00000344204 ZNRF1Q8ND25 227 aa11.17□□□□□ -0.62
TRIO-202ENST00000344204 EEF1AKMT3Q96AZ1 226 aa11.17□□□□□ -0.62
TRIO-202ENST00000344204 ARMS2P0C7Q2 107 aa11.17□□□□□ -0.62
TRIO-202ENST00000344204 C16orf54Q6UWD8 224 aa11.17□□□□□ -0.62
TRIO-202ENST00000344204 Q6ZRM9 215 aa11.17□□□□□ -0.62
TRIO-202ENST00000344204 TIMM21Q9BVV7 248 aa11.17□□□□□ -0.62
TRIO-202ENST00000344204 PLA2G2FQ9BZM2 168 aa11.17□□□□□ -0.62
TRIO-202ENST00000344204 LINC01545Q5VT33 79 aa11.17□□□□□ -0.62
TRIO-202ENST00000344204 FGF6P10767 208 aa11.16□□□□□ -0.62
TRIO-202ENST00000344204 DYNLRB2Q8TF09 96 aa11.16□□□□□ -0.62
TRIO-202ENST00000344204 CELA2AP08217 269 aa11.16□□□□□ -0.62
TRIO-202ENST00000344204 PHLDA1Q8WV24 401 aaPredicted RBP11.16□□□□□ -0.62
TRIO-202ENST00000344204 LINC00479Q96M42 142 aa11.16□□□□□ -0.62
TRIO-202ENST00000344204 TRAV13-1A0A0B4J241 112 aa11.16□□□□□ -0.62
TRIO-202ENST00000344204 A0A1W2PR77 199 aa11.16□□□□□ -0.62
TRIO-202ENST00000344204 C11orf52Q96A22 123 aa11.16□□□□□ -0.62
TRIO-202ENST00000344204 PCP2Q8IVA1 136 aa11.16□□□□□ -0.62
TRIO-202ENST00000344204 IGKV3OR2-268A0A0C4DH90 116 aa11.15□□□□□ -0.62
TRIO-202ENST00000344204 HIVEP2P31629 2446 aa11.15□□□□□ -0.62
TRIO-202ENST00000344204 CD3EP07766 207 aa11.15□□□□□ -0.62
TRIO-202ENST00000344204 MRPL23Q16540 153 aaKnown RBP11.15□□□□□ -0.62
TRIO-202ENST00000344204 IGHV5-10-1A0A0J9YXX1 117 aa11.15□□□□□ -0.62
TRIO-202ENST00000344204 CCL8P80075 99 aa11.15□□□□□ -0.62
TRIO-202ENST00000344204 SLC50A1Q9BRV3 221 aa11.15□□□□□ -0.62
TRIO-202ENST00000344204 PRADC1Q9BSG0 188 aa11.15□□□□□ -0.62
TRIO-202ENST00000344204 VWC2Q2TAL6 325 aa11.15□□□□□ -0.62
TRIO-202ENST00000344204 TGFBR3LH3BV60 316 aa11.15□□□□□ -0.62
TRIO-202ENST00000344204 DDB2Q92466 427 aa11.15□□□□□ -0.62
TRIO-202ENST00000344204 TTTY12Q9BZ98 90 aa11.15□□□□□ -0.62
TRIO-202ENST00000344204 IGKV2-40A0A087WW87 121 aaPredicted RBP11.15□□□□□ -0.62
TRIO-202ENST00000344204 IGKV2D-40P01614 121 aaPredicted RBP11.15□□□□□ -0.62
TRIO-202ENST00000344204 K7EN84 100 aa11.15□□□□□ -0.63
TRIO-202ENST00000344204 DEFB109BQ30KR1 87 aa11.15□□□□□ -0.63
TRIO-202ENST00000344204 PRR33A8MZF0 331 aa11.14□□□□□ -0.63
TRIO-202ENST00000344204 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.14□□□□□ -0.63
TRIO-202ENST00000344204 FAM104BQ5XKR9 115 aa11.14□□□□□ -0.63
TRIO-202ENST00000344204 IL15RAQ13261 267 aa11.14□□□□□ -0.63
TRIO-202ENST00000344204 SLC22A18ASQ8N1D0 253 aa11.14□□□□□ -0.63
TRIO-202ENST00000344204 A0A1W2PPI3 338 aa11.14□□□□□ -0.63
TRIO-202ENST00000344204 FOXI1Q12951 378 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms