RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 NOP10Q9NPE3 64 aaKnown RBP11.41□□□□□ -0.58
H3F3C-201ENST00000340398 C9orf170A2RU37 121 aa11.4□□□□□ -0.58
H3F3C-201ENST00000340398 CCL18P55774 89 aa11.4□□□□□ -0.58
H3F3C-201ENST00000340398 TAS2R60P59551 318 aa11.4□□□□□ -0.58
H3F3C-201ENST00000340398 PLP1P60201 277 aa11.4□□□□□ -0.58
H3F3C-201ENST00000340398 RPUSD4Q96CM3 377 aaKnown RBP11.4□□□□□ -0.58
H3F3C-201ENST00000340398 ARL6Q9H0F7 186 aa11.4□□□□□ -0.58
H3F3C-201ENST00000340398 MRPS12O15235 138 aaKnown RBP11.39□□□□□ -0.59
H3F3C-201ENST00000340398 SSSCA1O60232 199 aa11.39□□□□□ -0.59
H3F3C-201ENST00000340398 METTL15P1P0C7V9 234 aa11.39□□□□□ -0.59
H3F3C-201ENST00000340398 ANXA7P20073 488 aaKnown RBP11.39□□□□□ -0.59
H3F3C-201ENST00000340398 SSX7Q7RTT5 188 aa11.39□□□□□ -0.59
H3F3C-201ENST00000340398 PARD6GQ9BYG4 376 aaPredicted RBP11.39□□□□□ -0.59
H3F3C-201ENST00000340398 FLVCR2Q9UPI3 526 aa11.39□□□□□ -0.59
H3F3C-201ENST00000340398 TIMM8BQ9Y5J9 83 aaPredicted RBP11.39□□□□□ -0.59
H3F3C-201ENST00000340398 A0A087X0K7 114 aa11.38□□□□□ -0.59
H3F3C-201ENST00000340398 NOL3O60936 208 aaKnown RBP11.38□□□□□ -0.59
H3F3C-201ENST00000340398 SLC38A11Q08AI6 406 aa11.38□□□□□ -0.59
H3F3C-201ENST00000340398 OR5I1Q13606 314 aa11.38□□□□□ -0.59
H3F3C-201ENST00000340398 CLINT1Q14677 625 aa11.38□□□□□ -0.59
H3F3C-201ENST00000340398 TMEM256Q8N2U0 113 aa11.38□□□□□ -0.59
H3F3C-201ENST00000340398 SMIM8Q96KF7 97 aa11.38□□□□□ -0.59
H3F3C-201ENST00000340398 ARV1Q9H2C2 271 aa11.38□□□□□ -0.59
H3F3C-201ENST00000340398 NPVFQ9HCQ7 196 aa11.38□□□□□ -0.59
H3F3C-201ENST00000340398 APOBP04114 4563 aaKnown RBP11.37□□□□□ -0.59
H3F3C-201ENST00000340398 PRAC2D3DTV9 90 aa11.37□□□□□ -0.59
H3F3C-201ENST00000340398 H3BTX0 84 aa11.37□□□□□ -0.59
H3F3C-201ENST00000340398 CDKN1BP46527 198 aa11.37□□□□□ -0.59
H3F3C-201ENST00000340398 SELENOTP62341 195 aa11.37□□□□□ -0.59
H3F3C-201ENST00000340398 MAPKAPK5-AS1Q8N8E1 139 aa11.37□□□□□ -0.59
H3F3C-201ENST00000340398 RNASE8Q8TDE3 154 aaKnown RBP11.37□□□□□ -0.59
H3F3C-201ENST00000340398 C16orf74Q96GX8 76 aa11.37□□□□□ -0.59
H3F3C-201ENST00000340398 Q9H8V8 135 aa11.37□□□□□ -0.59
H3F3C-201ENST00000340398 A0A0J9YY99 117 aa11.36□□□□□ -0.59
H3F3C-201ENST00000340398 CDK2AP2O75956 126 aa11.36□□□□□ -0.59
H3F3C-201ENST00000340398 DLK1P80370 383 aa11.36□□□□□ -0.59
H3F3C-201ENST00000340398 ARL16Q0P5N6 197 aa11.36□□□□□ -0.59
H3F3C-201ENST00000340398 TMEM14EPQ6UXP3 125 aa11.36□□□□□ -0.59
H3F3C-201ENST00000340398 KRTAP1-5Q9BYS1 174 aa11.36□□□□□ -0.59
H3F3C-201ENST00000340398 ZNF331Q9NQX6 463 aaPredicted RBP11.36□□□□□ -0.59
H3F3C-201ENST00000340398 TRAV26-1A0A087WT03 109 aa11.35□□□□□ -0.59
H3F3C-201ENST00000340398 SCGB1D2O95969 90 aa11.35□□□□□ -0.59
H3F3C-201ENST00000340398 MORN5Q5VZ52 161 aa11.35□□□□□ -0.59
H3F3C-201ENST00000340398 TEPPQ6URK8 271 aa11.35□□□□□ -0.59
H3F3C-201ENST00000340398 ZNF493Q6ZR52 646 aa11.35□□□□□ -0.59
H3F3C-201ENST00000340398 LINC00305Q7Z4B0 112 aa11.35□□□□□ -0.59
H3F3C-201ENST00000340398 SPATA12Q7Z6I5 190 aa11.35□□□□□ -0.59
H3F3C-201ENST00000340398 CCDC190Q86UF4 302 aa11.35□□□□□ -0.59
H3F3C-201ENST00000340398 DNAH5Q8TE73 4624 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 LINC00854A0A1B0GVQ3 168 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 GAGE12BA1L429 117 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 H7BYZ3 331 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 J3KRW8 73 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 GOSR2O14653 212 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 GAGE7O76087 117 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 OR4E1P0C645 316 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 GAGE12FP0CL80 117 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 GAGE12GP0CL81 117 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 GAGE12IP0CL82 117 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 HOXA5P20719 270 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 S100A5P33763 92 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 UBE2MP61081 183 aaKnown RBP11.34□□□□□ -0.59
H3F3C-201ENST00000340398 BAK1Q16611 211 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 ESRGQ1W209 222 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 ZBTB8BQ8NAP8 495 aaPredicted RBP11.34□□□□□ -0.59
H3F3C-201ENST00000340398 OR10P1Q8NGE3 313 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 TMEM263Q8WUH6 116 aaKnown RBP11.34□□□□□ -0.59
H3F3C-201ENST00000340398 DEDD2Q8WXF8 326 aa11.34□□□□□ -0.59
H3F3C-201ENST00000340398 GNPNAT1Q96EK6 184 aaPredicted RBP11.34□□□□□ -0.59
H3F3C-201ENST00000340398 K7EPK0 472 aa11.33□□□□□ -0.6
H3F3C-201ENST00000340398 ZNF701M0R085 212 aaPredicted RBP11.33□□□□□ -0.6
H3F3C-201ENST00000340398 SLC17A3O00476 420 aa11.33□□□□□ -0.6
H3F3C-201ENST00000340398 AGPAT2O15120 278 aa11.33□□□□□ -0.6
H3F3C-201ENST00000340398 NDUFB6O95139 128 aa11.33□□□□□ -0.6
H3F3C-201ENST00000340398 GFI1BQ5VTD9 330 aa11.33□□□□□ -0.6
H3F3C-201ENST00000340398 TMEM37Q8WXS4 190 aa11.33□□□□□ -0.6
H3F3C-201ENST00000340398 GSKIPQ9P0R6 139 aa11.33□□□□□ -0.6
H3F3C-201ENST00000340398 MGAT4CQ9UBM8 478 aa11.33□□□□□ -0.6
H3F3C-201ENST00000340398 FNDC10F2Z333 226 aa11.32□□□□□ -0.6
H3F3C-201ENST00000340398 H3BQ15 152 aa11.32□□□□□ -0.6
H3F3C-201ENST00000340398 M6PRP20645 277 aa11.32□□□□□ -0.6
H3F3C-201ENST00000340398 IAH1Q2TAA2 248 aaPredicted RBP11.32□□□□□ -0.6
H3F3C-201ENST00000340398 DMRTA1Q5VZB9 504 aa11.32□□□□□ -0.6
H3F3C-201ENST00000340398 LCN15Q6UWW0 184 aa11.32□□□□□ -0.6
H3F3C-201ENST00000340398 S100A7AQ86SG5 101 aa11.32□□□□□ -0.6
H3F3C-201ENST00000340398 LINC00612Q8N6U2 182 aa11.32□□□□□ -0.6
H3F3C-201ENST00000340398 RXFP4Q8TDU9 374 aa11.32□□□□□ -0.6
H3F3C-201ENST00000340398 SRRQ9GZT4 340 aa11.32□□□□□ -0.6
H3F3C-201ENST00000340398 TRAV5A0A0B4J249 113 aa11.31□□□□□ -0.6
H3F3C-201ENST00000340398 CCDC160A6NGH7 325 aa11.31□□□□□ -0.6
H3F3C-201ENST00000340398 CT45A10P0DMU9 189 aa11.31□□□□□ -0.6
H3F3C-201ENST00000340398 KRTAP10-2P60368 255 aa11.31□□□□□ -0.6
H3F3C-201ENST00000340398 OPCMLQ14982 345 aa11.31□□□□□ -0.6
H3F3C-201ENST00000340398 BPIFA4PQ86YQ2 179 aa11.31□□□□□ -0.6
H3F3C-201ENST00000340398 CCDC28AQ8IWP9 274 aa11.31□□□□□ -0.6
H3F3C-201ENST00000340398 OR10J6PQ8NGY7 276 aa11.31□□□□□ -0.6
H3F3C-201ENST00000340398 SAT2Q96F10 170 aaPredicted RBP11.31□□□□□ -0.6
H3F3C-201ENST00000340398 MGST2Q99735 147 aa11.31□□□□□ -0.6
H3F3C-201ENST00000340398 RCL1Q9Y2P8 373 aaKnown RBP11.31□□□□□ -0.6
H3F3C-201ENST00000340398 TRAV12-3A0A0B4J271 114 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms