RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 FAM74A3Q4VXF1 159 aa11.21□□□□□ -0.61
CBX3-201ENST00000337620 C16orf54Q6UWD8 224 aa11.21□□□□□ -0.61
CBX3-201ENST00000337620 CLRN3Q8NCR9 226 aa11.21□□□□□ -0.61
CBX3-201ENST00000337620 C11orf52Q96A22 123 aa11.21□□□□□ -0.61
CBX3-201ENST00000337620 CITED2Q99967 270 aaPredicted RBP11.21□□□□□ -0.61
CBX3-201ENST00000337620 OTORQ9NRC9 128 aa11.21□□□□□ -0.61
CBX3-201ENST00000337620 RPH3ALQ9UNE2 315 aa11.21□□□□□ -0.61
CBX3-201ENST00000337620 IGHV7-4-1A0A0J9YVY3 117 aa11.21□□□□□ -0.62
CBX3-201ENST00000337620 LINC01619G3V211 115 aa11.21□□□□□ -0.62
CBX3-201ENST00000337620 K7EMT4 169 aa11.21□□□□□ -0.62
CBX3-201ENST00000337620 C8orf86Q6ZUL3 223 aa11.21□□□□□ -0.62
CBX3-201ENST00000337620 OR1N2Q8NGR9 330 aa11.21□□□□□ -0.62
CBX3-201ENST00000337620 TVP23CQ96ET8 276 aa11.21□□□□□ -0.62
CBX3-201ENST00000337620 GRAMD2BQ96HH9 432 aa11.21□□□□□ -0.62
CBX3-201ENST00000337620 EDN2P20800 178 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 SLURP1P55000 103 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 PROK1P58294 105 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 PDE6HQ13956 83 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 TMEM241Q24JQ0 296 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 SIGLEC15Q6ZMC9 328 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 RHPN1-AS1Q9BWJ2 59 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 EPDR1Q9UM22 224 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 HELTA6NFD8 242 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 PEX7O00628 323 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 RPL35P42766 123 aaKnown RBP11.2□□□□□ -0.62
CBX3-201ENST00000337620 AWAT1Q58HT5 328 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 LYPD1Q8N2G4 141 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 C5orf17Q8NAS9 161 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 CMTM2Q8TAZ6 248 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 GLMPQ8WWB7 406 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 WFDC12Q8WWY7 111 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 NAT8Q9UHE5 227 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 SMPXQ9UHP9 88 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 TSSC4Q9Y5U2 329 aaPredicted RBP11.2□□□□□ -0.62
CBX3-201ENST00000337620 SELENOKQ9Y6D0 94 aa11.2□□□□□ -0.62
CBX3-201ENST00000337620 PSG9Q00887 426 aa11.19□□□□□ -0.62
CBX3-201ENST00000337620 C1QL4Q86Z23 238 aa11.19□□□□□ -0.62
CBX3-201ENST00000337620 C2CD4CQ8TF44 421 aa11.19□□□□□ -0.62
CBX3-201ENST00000337620 LINC00479Q96M42 142 aa11.19□□□□□ -0.62
CBX3-201ENST00000337620 AAMDCQ9H7C9 122 aa11.19□□□□□ -0.62
CBX3-201ENST00000337620 SDF2L1Q9HCN8 221 aa11.19□□□□□ -0.62
CBX3-201ENST00000337620 TMEM213A2RRL7 107 aa11.18□□□□□ -0.62
CBX3-201ENST00000337620 CHEK1O14757 476 aa11.18□□□□□ -0.62
CBX3-201ENST00000337620 AKR1C3P42330 323 aa11.18□□□□□ -0.62
CBX3-201ENST00000337620 RPL11P62913 178 aaKnown RBP11.18□□□□□ -0.62
CBX3-201ENST00000337620 KLF5Q13887 457 aaPredicted RBP11.18□□□□□ -0.62
CBX3-201ENST00000337620 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.18□□□□□ -0.62
CBX3-201ENST00000337620 REC114Q7Z4M0 266 aa11.18□□□□□ -0.62
CBX3-201ENST00000337620 HIST1H2BAQ96A08 127 aa11.18□□□□□ -0.62
CBX3-201ENST00000337620 TCEAL7Q9BRU2 100 aa11.18□□□□□ -0.62
CBX3-201ENST00000337620 A0A087X0K7 114 aa11.18□□□□□ -0.62
CBX3-201ENST00000337620 LGALS9O00182 355 aa11.18□□□□□ -0.62
CBX3-201ENST00000337620 PRB4P10163 310 aaPredicted RBP11.18□□□□□ -0.62
CBX3-201ENST00000337620 ADIRFQ15847 76 aa11.18□□□□□ -0.62
CBX3-201ENST00000337620 IGFL4Q6B9Z1 124 aa11.18□□□□□ -0.62
CBX3-201ENST00000337620 C2CD3Q4AC94 2353 aa11.18□□□□□ -0.62
CBX3-201ENST00000337620 TRAV34A0A0B4J273 112 aa11.17□□□□□ -0.62
CBX3-201ENST00000337620 LOC105371267A0A1B0GV96 52 aa11.17□□□□□ -0.62
CBX3-201ENST00000337620 PGPEP1LA6NFU8 196 aa11.17□□□□□ -0.62
CBX3-201ENST00000337620 CNN1P51911 297 aaKnown RBP11.17□□□□□ -0.62
CBX3-201ENST00000337620 ATG101Q9BSB4 218 aa11.17□□□□□ -0.62
CBX3-201ENST00000337620 RPS10P5Q9NQ39 176 aa11.17□□□□□ -0.62
CBX3-201ENST00000337620 AURKAIP1Q9NWT8 199 aaPredicted RBP11.17□□□□□ -0.62
CBX3-201ENST00000337620 TRBV20OR9-2A0A075B6H5 130 aa11.17□□□□□ -0.62
CBX3-201ENST00000337620 A8MWP6 167 aa11.17□□□□□ -0.62
CBX3-201ENST00000337620 M0R3E3 92 aa11.17□□□□□ -0.62
CBX3-201ENST00000337620 TCRAP04437 139 aa11.17□□□□□ -0.62
CBX3-201ENST00000337620 PNRC1Q12796 327 aaPredicted RBP11.17□□□□□ -0.62
CBX3-201ENST00000337620 RAX2Q96IS3 184 aa11.17□□□□□ -0.62
CBX3-201ENST00000337620 SGK494Q96LW2 274 aa11.17□□□□□ -0.62
CBX3-201ENST00000337620 ZNF331Q9NQX6 463 aaPredicted RBP11.17□□□□□ -0.62
CBX3-201ENST00000337620 IGKV3-7A0A075B6H7 116 aa11.16□□□□□ -0.62
CBX3-201ENST00000337620 C7orf77A4D0Y5 90 aa11.16□□□□□ -0.62
CBX3-201ENST00000337620 ZNF253O75346 499 aa11.16□□□□□ -0.62
CBX3-201ENST00000337620 BMI1P35226 326 aa11.16□□□□□ -0.62
CBX3-201ENST00000337620 RPL23P62829 140 aaKnown RBP11.16□□□□□ -0.62
CBX3-201ENST00000337620 TEP1Q99973 2627 aaKnown RBP11.16□□□□□ -0.62
CBX3-201ENST00000337620 HLA-DMBP28068 263 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 GNG4P50150 75 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 CENPWQ5EE01 88 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 GOLT1AQ6ZVE7 132 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 DLX4Q92988 240 aaPredicted RBP11.15□□□□□ -0.62
CBX3-201ENST00000337620 JMJD1CQ15652 2540 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 C2orf70A6NJV1 201 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 CCL24O00175 119 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 ISLRO14498 428 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 CBLN1P23435 193 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 CSN1S1P47710 185 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 MEOX2P50222 304 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 UBE2G1P62253 170 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 BTN1A1Q13410 526 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 RHEBQ15382 184 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 NSUN5P1Q3KNT7 163 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 TCF24Q7RTU0 167 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.15□□□□□ -0.62
CBX3-201ENST00000337620 SLC50A1Q9BRV3 221 aa11.15□□□□□ -0.62
CBX3-201ENST00000337620 KRTAP10-3P60369 221 aa11.14□□□□□ -0.63
CBX3-201ENST00000337620 LINC01551Q86U37 167 aa11.14□□□□□ -0.63
CBX3-201ENST00000337620 RNF182Q8N6D2 247 aa11.14□□□□□ -0.63
CBX3-201ENST00000337620 OCC1Q8TAD7 63 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms