RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 NUDT11Q96G61 164 aa7.07□□□□□ -1.28
COPB2-201ENST00000333188 MINOS1-NBL1R4GNA1 71 aa7.07□□□□□ -1.28
COPB2-201ENST00000333188 C5orf52A6NGY3 159 aa7.07□□□□□ -1.28
COPB2-201ENST00000333188 F2Z2F3 143 aa7.07□□□□□ -1.28
COPB2-201ENST00000333188 ZNF253O75346 499 aa7.07□□□□□ -1.28
COPB2-201ENST00000333188 GOSR1O95249 250 aa7.07□□□□□ -1.28
COPB2-201ENST00000333188 CRISP2P16562 243 aa7.07□□□□□ -1.28
COPB2-201ENST00000333188 SRP14P37108 136 aaKnown RBP7.07□□□□□ -1.28
COPB2-201ENST00000333188 IQCJQ1A5X6 159 aa7.07□□□□□ -1.28
COPB2-201ENST00000333188 STXBP6Q8NFX7 210 aa7.07□□□□□ -1.28
COPB2-201ENST00000333188 TMEM8BA6NDV4 472 aa7.06□□□□□ -1.28
COPB2-201ENST00000333188 CXorf65A6NEN9 183 aa7.06□□□□□ -1.28
COPB2-201ENST00000333188 SCGB2A1O75556 95 aa7.06□□□□□ -1.28
COPB2-201ENST00000333188 TOMM20LQ6UXN7 152 aa7.06□□□□□ -1.28
COPB2-201ENST00000333188 RNF2Q99496 336 aa7.06□□□□□ -1.28
COPB2-201ENST00000333188 SRIP30626 198 aa7.06□□□□□ -1.28
COPB2-201ENST00000333188 KRTDAPP60985 99 aa7.06□□□□□ -1.28
COPB2-201ENST00000333188 K7EQM0 130 aa7.06□□□□□ -1.28
COPB2-201ENST00000333188 TCRAP04437 139 aa7.06□□□□□ -1.28
COPB2-201ENST00000333188 CTSGP08311 255 aa7.06□□□□□ -1.28
COPB2-201ENST00000333188 HIST1H1EP10412 219 aaKnown RBP7.06□□□□□ -1.28
COPB2-201ENST00000333188 ATP5IP56385 69 aaPredicted RBP7.06□□□□□ -1.28
COPB2-201ENST00000333188 SRSF2Q01130 221 aaKnown RBP7.06□□□□□ -1.28
COPB2-201ENST00000333188 RELQ04864 619 aaPredicted RBP7.06□□□□□ -1.28
COPB2-201ENST00000333188 BTF3L4Q96K17 158 aa7.06□□□□□ -1.28
COPB2-201ENST00000333188 C8orf49Q96NF6 230 aa7.06□□□□□ -1.28
COPB2-201ENST00000333188 C19orf24Q9BVV8 132 aa7.06□□□□□ -1.28
COPB2-201ENST00000333188 TENM4Q6N022 2769 aa7.06□□□□□ -1.28
COPB2-201ENST00000333188 OVOL3O00110 214 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 BMPR1BO00238 502 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 ARL3P36405 182 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 LINC00322Q6ZN03 302 aaPredicted RBP7.05□□□□□ -1.28
COPB2-201ENST00000333188 C5orf17Q8NAS9 161 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 IL36BQ9NZH7 164 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 LOC389332A0A1B0GUA5 103 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 CHEK1O14757 476 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 ZNF138P52744 262 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 SRSF1Q07955 248 aaKnown RBP eCLIP7.05□□□□□ -1.28
COPB2-201ENST00000333188 PMCHL1Q16048 86 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 RNASEKQ6P5S7 137 aaKnown RBP7.05□□□□□ -1.28
COPB2-201ENST00000333188 C16orf92Q96LL3 132 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 MOB4Q9Y3A3 225 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 FXYD7P58549 80 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 DEFB136Q30KP8 78 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 THAP8Q8NA92 274 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 WFDC11Q8NEX6 87 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 PITPNC1Q9UKF7 332 aa7.05□□□□□ -1.28
COPB2-201ENST00000333188 UBR5O95071 2799 aaPredicted RBP7.04□□□□□ -1.28
COPB2-201ENST00000333188 IGLV11-55A0A075B6I3 123 aa7.04□□□□□ -1.28
COPB2-201ENST00000333188 NUPR1O60356 82 aa7.04□□□□□ -1.28
COPB2-201ENST00000333188 ATOH7Q8N100 152 aa7.04□□□□□ -1.28
COPB2-201ENST00000333188 GPR82Q96P67 336 aa7.04□□□□□ -1.28
COPB2-201ENST00000333188 ARL2-SNX15V9GYD0 113 aa7.04□□□□□ -1.28
COPB2-201ENST00000333188 NIPBLQ6KC79 2804 aaeCLIP7.04□□□□□ -1.285e-6■■■□□ 16.4
COPB2-201ENST00000333188 AGRNO00468 2067 aa7.04□□□□□ -1.28
COPB2-201ENST00000333188 TRBV24-1A0A075B6N3 115 aa7.04□□□□□ -1.28
COPB2-201ENST00000333188 NPBQ8NG41 125 aa7.04□□□□□ -1.28
COPB2-201ENST00000333188 EEF1AKMT3Q96AZ1 226 aa7.04□□□□□ -1.28
COPB2-201ENST00000333188 METTL26Q96S19 204 aa7.04□□□□□ -1.28
COPB2-201ENST00000333188 RNF5Q99942 180 aa7.04□□□□□ -1.28
COPB2-201ENST00000333188 ATG101Q9BSB4 218 aa7.04□□□□□ -1.28
COPB2-201ENST00000333188 TBL2Q9Y4P3 447 aaKnown RBP7.04□□□□□ -1.28
COPB2-201ENST00000333188 F8P00451 2351 aa7.04□□□□□ -1.28
COPB2-201ENST00000333188 F6UB75 175 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 NDUFA3O95167 84 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 EGR2P11161 476 aaPredicted RBP7.03□□□□□ -1.28
COPB2-201ENST00000333188 CDX1P47902 265 aaPredicted RBP7.03□□□□□ -1.28
COPB2-201ENST00000333188 AMTP48728 403 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 TM4SF20Q53R12 229 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 DMRTA1Q5VZB9 504 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 UNQ9165/PRO28630Q6UXU0 137 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 C1orf122Q6ZSJ8 110 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 VGLL1Q99990 258 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 SHANK2-AS3Q9BTD1 123 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 V9GYV3 84 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 GCGP01275 180 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 CRYGCP07315 174 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 GP9P14770 177 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 EDN2P20800 178 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 PYY3Q5JQD4 70 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 C5orf56Q8N8D9 126 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 TXNDC17Q9BRA2 123 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 MCRIP2Q9BUT9 160 aaKnown RBP7.03□□□□□ -1.28
COPB2-201ENST00000333188 PSG8Q9UQ74 426 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 PSMB11A5LHX3 300 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 HOXA3O43365 443 aaPredicted RBP7.03□□□□□ -1.28
COPB2-201ENST00000333188 RPL7P18124 248 aaKnown RBP7.03□□□□□ -1.28
COPB2-201ENST00000333188 HOXA5P20719 270 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 PAX8Q06710 450 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 ZNF738Q8NE65 137 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 OR4X2Q8NGF9 303 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 CDC42EP3Q9UKI2 254 aa7.03□□□□□ -1.28
COPB2-201ENST00000333188 PRAC2D3DTV9 90 aa7.02□□□□□ -1.29
COPB2-201ENST00000333188 FNDC10F2Z333 226 aa7.02□□□□□ -1.29
COPB2-201ENST00000333188 SERF1AO75920 110 aa7.02□□□□□ -1.29
COPB2-201ENST00000333188 APCSP02743 223 aa7.02□□□□□ -1.29
COPB2-201ENST00000333188 PAX2Q02962 417 aa7.02□□□□□ -1.29
COPB2-201ENST00000333188 NUP35Q8NFH5 326 aa7.02□□□□□ -1.29
COPB2-201ENST00000333188 TRBV19A0A075B6N1 114 aa7.02□□□□□ -1.29
COPB2-201ENST00000333188 TRAV30A0A087WSZ9 112 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms