RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 THAP8Q8NA92 274 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 OR51G1Q8NGK1 321 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 COQ8AQ8NI60 647 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 NPIPB3Q92617 1050 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 SLC35E1Q96K37 410 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 GGACTQ9BVM4 153 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 NIT2Q9NQR4 276 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 UBQLN2Q9UHD9 624 aa4.65□□□□□ -1.67
SMG1-201ENST00000330588 COL7A1Q02388 2944 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 PRSS46E5RG02 174 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 K7EP13 123 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 BUB3O43684 328 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 JTBO76095 146 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 NXPH3O95157 252 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 APOHP02749 345 aaPredicted RBP4.64□□□□□ -1.67
SMG1-201ENST00000330588 IL4P05112 153 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 TAS2R30P59541 319 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 SNRPD3P62318 126 aaKnown RBP4.64□□□□□ -1.67
SMG1-201ENST00000330588 CD300CQ08708 224 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 SPATA31B1PQ5VZV4 182 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 GGNBP1Q5YKI7 109 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 TMED4Q7Z7H5 227 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 LYG2Q86SG7 212 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 TRPT1Q86TN4 253 aaKnown RBP4.64□□□□□ -1.67
SMG1-201ENST00000330588 STXBP6Q8NFX7 210 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 SDHCQ99643 169 aaPredicted RBP4.64□□□□□ -1.67
SMG1-201ENST00000330588 RABAC1Q9UI14 185 aa4.64□□□□□ -1.67
SMG1-201ENST00000330588 TRGV11A0A075B6L2 103 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 IGKV1D-37A0A075B6S9 117 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 LOC102723971A0A1B0GUV8 181 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 A0A1B0GV72 72 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 IFNA21P01568 189 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 PSG1P11464 419 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 SCGB1A1P11684 91 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 BTCP35070 178 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 NKX2-1P43699 371 aaPredicted RBP4.63□□□□□ -1.67
SMG1-201ENST00000330588 DEFB131AP59861 70 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 DHRS2Q13268 280 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 DEFB135Q30KP9 77 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 TMEM88Q6PEY1 159 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 SIGLEC15Q6ZMC9 328 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 APRG1Q8IVJ8 170 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 STHQ8IWL8 128 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 OR4D5Q8NGN0 318 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 RNASE8Q8TDE3 154 aaKnown RBP4.63□□□□□ -1.67
SMG1-201ENST00000330588 ACY3Q96HD9 319 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 GPR82Q96P67 336 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 CCDC32Q9BV29 185 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 C1QTNF4Q9BXJ3 329 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 HRH4Q9H3N8 390 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 NRN1Q9NPD7 142 aa4.63□□□□□ -1.67
SMG1-201ENST00000330588 IGHV3-49A0A0A0MS15 119 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 A0A1B0GW15 77 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 FBLL1A6NHQ2 334 aaKnown RBP4.62□□□□□ -1.67
SMG1-201ENST00000330588 ZFP92A6NM28 416 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 SNRPGP15A8MWD9 76 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 F5H697 171 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 K7EPK0 472 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 IL7P13232 177 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 MIFP14174 115 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 PSMB3P49720 205 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 TCTAP57738 103 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 PLP1P60201 277 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 DLK1P80370 383 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 ZFAND6Q6FIF0 208 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 TMEM144Q7Z5S9 345 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 S100A7AQ86SG5 101 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 MRPL52Q86TS9 123 aaKnown RBP4.62□□□□□ -1.67
SMG1-201ENST00000330588 SFT2D1Q8WV19 159 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 SAT2Q96F10 170 aaPredicted RBP4.62□□□□□ -1.67
SMG1-201ENST00000330588 SMIM8Q96KF7 97 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 RAB40CQ96S21 281 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 RARRES2Q99969 163 aa4.62□□□□□ -1.67
SMG1-201ENST00000330588 IGHV3OR16-13A0A075B7E8 117 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 IGHV3-74A0A0B4J1X5 117 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 A0A0J9YWU9 116 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 ZNF705EA8MWA4 302 aaPredicted RBP4.61□□□□□ -1.67
SMG1-201ENST00000330588 CA1P00915 261 aaPredicted RBP4.61□□□□□ -1.67
SMG1-201ENST00000330588 RPL35AP18077 110 aaKnown RBP4.61□□□□□ -1.67
SMG1-201ENST00000330588 ID1P41134 155 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 TFPI2P48307 235 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 SELENOTP62341 195 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 VAMP3Q15836 100 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 CEMP1Q6PRD7 247 aaPredicted RBP4.61□□□□□ -1.67
SMG1-201ENST00000330588 ZFP82Q8N141 532 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 GBGT1Q8N5D6 347 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 HSD17B11Q8NBQ5 300 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 S100ZQ8WXG8 99 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 SMIM12Q96EX1 92 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 KLK5Q9Y337 293 aaPredicted RBP4.61□□□□□ -1.67
SMG1-201ENST00000330588 SELENOKQ9Y6D0 94 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 IGKV1OR2-108A0A075B7D4 117 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 PMS2P5A8MQ11 134 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 A8MTW9 85 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 C11orf94C9JXX5 98 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 SMLR1H3BR10 107 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 ISLRO14498 428 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 PLA2G10O15496 165 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 LYRM1O43325 122 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 EIF3GO75821 320 aaKnown RBP eCLIP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms