RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 PRSS46E5RG02 174 aa17.03■□□□□ 0.32
RNF40-201ENST00000324685 MYOFQ9NZM1 2061 aa17.03■□□□□ 0.32
RNF40-201ENST00000324685 GAGE12BA1L429 117 aa17.03■□□□□ 0.32
RNF40-201ENST00000324685 GTSF1LQ9H1H1 148 aa17.03■□□□□ 0.32
RNF40-201ENST00000324685 LYPD2Q6UXB3 125 aa17.02■□□□□ 0.32
RNF40-201ENST00000324685 SPINK8P0C7L1 97 aa17.02■□□□□ 0.32
RNF40-201ENST00000324685 RHODO00212 210 aa17.02■□□□□ 0.31
RNF40-201ENST00000324685 FAM110DQ8TAY7 271 aaPredicted RBP17.02■□□□□ 0.31
RNF40-201ENST00000324685 COL8A2P25067 703 aa17.02■□□□□ 0.31
RNF40-201ENST00000324685 COX11Q9Y6N1 276 aa17.02■□□□□ 0.31
RNF40-201ENST00000324685 IL17RELQ6ZVW7 336 aa17.01■□□□□ 0.31
RNF40-201ENST00000324685 GBF1Q92538 1859 aa17.01■□□□□ 0.31
RNF40-201ENST00000324685 ADCYAP1P18509 176 aa17.01■□□□□ 0.31
RNF40-201ENST00000324685 CFPP27918 469 aa17.01■□□□□ 0.31
RNF40-201ENST00000324685 Q6ZRM9 215 aa17.01■□□□□ 0.31
RNF40-201ENST00000324685 ZNF581Q9P0T4 197 aa17.01■□□□□ 0.31
RNF40-201ENST00000324685 C1orf122Q6ZSJ8 110 aa17.01■□□□□ 0.31
RNF40-201ENST00000324685 ZNF625Q96I27 306 aaPredicted RBP17.01■□□□□ 0.31
RNF40-201ENST00000324685 RNF114Q9Y508 228 aa17.01■□□□□ 0.31
RNF40-201ENST00000324685 Q8N8P6 123 aa17■□□□□ 0.31
RNF40-201ENST00000324685 RP1P56715 2156 aa17■□□□□ 0.31
RNF40-201ENST00000324685 TPRP12270 2363 aaKnown RBP17■□□□□ 0.31
RNF40-201ENST00000324685 GNLYP22749 145 aa17■□□□□ 0.31
RNF40-201ENST00000324685 YPEL3P61236 119 aaPredicted RBP17■□□□□ 0.31
RNF40-201ENST00000324685 OVOL3O00110 214 aa17■□□□□ 0.31
RNF40-201ENST00000324685 KLHDC3Q9BQ90 382 aa17■□□□□ 0.31
RNF40-201ENST00000324685 A0A1W2PPI3 338 aa17■□□□□ 0.31
RNF40-201ENST00000324685 SAA4P35542 130 aa17■□□□□ 0.31
RNF40-201ENST00000324685 PFN1P07737 140 aaKnown RBP17■□□□□ 0.31
RNF40-201ENST00000324685 LINC00205P59089 165 aa17■□□□□ 0.31
RNF40-201ENST00000324685 TP53TG1Q9Y2A0 90 aa17■□□□□ 0.31
RNF40-201ENST00000324685 IGKV1-16P04430 117 aa16.99■□□□□ 0.31
RNF40-201ENST00000324685 MLANAQ16655 118 aa16.99■□□□□ 0.31
RNF40-201ENST00000324685 C20orf144Q9BQM9 153 aa16.99■□□□□ 0.31
RNF40-201ENST00000324685 H3BMM0 161 aa16.98■□□□□ 0.31
RNF40-201ENST00000324685 UBE2WQ96B02 151 aa16.98■□□□□ 0.31
RNF40-201ENST00000324685 INAFM2P0DMQ5 153 aa16.98■□□□□ 0.31
RNF40-201ENST00000324685 LURAP1LQ8IV03 231 aa16.98■□□□□ 0.31
RNF40-201ENST00000324685 MSRB2Q9Y3D2 182 aa16.98■□□□□ 0.31
RNF40-201ENST00000324685 SOCS3O14543 225 aa16.98■□□□□ 0.31
RNF40-201ENST00000324685 POLR3KQ9Y2Y1 108 aaPredicted RBP16.98■□□□□ 0.31
RNF40-201ENST00000324685 CABIN1Q9Y6J0 2220 aa16.98■□□□□ 0.31
RNF40-201ENST00000324685 I3L3M4 83 aa16.98■□□□□ 0.31
RNF40-201ENST00000324685 STPG4Q8N801 248 aa16.98■□□□□ 0.31
RNF40-201ENST00000324685 FAM104BQ5XKR9 115 aa16.97■□□□□ 0.31
RNF40-201ENST00000324685 MCRIP2Q9BUT9 160 aaKnown RBP16.97■□□□□ 0.31
RNF40-201ENST00000324685 LINC00479Q96M42 142 aa16.97■□□□□ 0.31
RNF40-201ENST00000324685 SYNJ2BPP57105 145 aa16.97■□□□□ 0.31
RNF40-201ENST00000324685 DEFB131AP59861 70 aa16.97■□□□□ 0.31
RNF40-201ENST00000324685 C18orf32Q8TCD1 76 aa16.97■□□□□ 0.31
RNF40-201ENST00000324685 TMEM14BQ9NUH8 114 aa16.97■□□□□ 0.31
RNF40-201ENST00000324685 CASP8AP2Q9UKL3 1982 aa16.97■□□□□ 0.31
RNF40-201ENST00000324685 TRBV20-1A0A075B6N2 111 aa16.97■□□□□ 0.31
RNF40-201ENST00000324685 TMEM213A2RRL7 107 aa16.96■□□□□ 0.31
RNF40-201ENST00000324685 RPL32P62910 135 aaKnown RBP16.96■□□□□ 0.31
RNF40-201ENST00000324685 MST1LQ2TV78 715 aa16.96■□□□□ 0.31
RNF40-201ENST00000324685 C8orf49Q96NF6 230 aa16.96■□□□□ 0.31
RNF40-201ENST00000324685 PMVKQ15126 192 aa16.96■□□□□ 0.31
RNF40-201ENST00000324685 GATA3P23771 443 aa16.95■□□□□ 0.3
RNF40-201ENST00000324685 RBMY1FQ15415 496 aaKnown RBP16.95■□□□□ 0.3
RNF40-201ENST00000324685 Q6ZS92 163 aa16.95■□□□□ 0.3
RNF40-201ENST00000324685 HS3ST6Q96QI5 342 aa16.95■□□□□ 0.3
RNF40-201ENST00000324685 UBE2E1P51965 193 aa16.95■□□□□ 0.3
RNF40-201ENST00000324685 C2orf66Q6UXQ4 117 aa16.95■□□□□ 0.3
RNF40-201ENST00000324685 SIPA1L1O43166 1804 aa16.95■□□□□ 0.3
RNF40-201ENST00000324685 DKK1O94907 266 aa16.95■□□□□ 0.3
RNF40-201ENST00000324685 DEFB130BP0DP73 79 aa16.95■□□□□ 0.3
RNF40-201ENST00000324685 DEFB130AP0DP74 79 aa16.95■□□□□ 0.3
RNF40-201ENST00000324685 DEFB121Q5J5C9 76 aa16.95■□□□□ 0.3
RNF40-201ENST00000324685 WDR90Q96KV7 1748 aa16.95■□□□□ 0.3
RNF40-201ENST00000324685 BPESC1Q9GZL8 116 aa16.95■□□□□ 0.3
RNF40-201ENST00000324685 NDUFA4L2Q9NRX3 87 aa16.95■□□□□ 0.3
RNF40-201ENST00000324685 TRBV25-1A0A075B6N4 114 aa16.94■□□□□ 0.3
RNF40-201ENST00000324685 SNHG12Q9BXW3 62 aa16.94■□□□□ 0.3
RNF40-201ENST00000324685 A8MWP6 167 aa16.94■□□□□ 0.3
RNF40-201ENST00000324685 CFHR2P36980 270 aa16.94■□□□□ 0.3
RNF40-201ENST00000324685 ASXL3Q9C0F0 2248 aa16.94■□□□□ 0.3
RNF40-201ENST00000324685 Q8TCH9 128 aa16.94■□□□□ 0.3
RNF40-201ENST00000324685 SPANXDQ9BXN6 97 aa16.94■□□□□ 0.3
RNF40-201ENST00000324685 NCOR1P1Q9H4R4 102 aa16.94■□□□□ 0.3
RNF40-201ENST00000324685 WNK3Q9BYP7 1800 aa16.93■□□□□ 0.3
RNF40-201ENST00000324685 TRBV19A0A075B6N1 114 aa16.93■□□□□ 0.3
RNF40-201ENST00000324685 LCTP09848 1927 aa16.93■□□□□ 0.3
RNF40-201ENST00000324685 E7EQL1 145 aa16.93■□□□□ 0.3
RNF40-201ENST00000324685 ATP6V0E1O15342 81 aa16.93■□□□□ 0.3
RNF40-201ENST00000324685 EREGO14944 169 aa16.93■□□□□ 0.3
RNF40-201ENST00000324685 ZNF833PQ6ZTB9 187 aa16.93■□□□□ 0.3
RNF40-201ENST00000324685 LINC01619G3V211 115 aa16.93■□□□□ 0.3
RNF40-201ENST00000324685 LMO1P25800 156 aa16.93■□□□□ 0.3
RNF40-201ENST00000324685 OR11H6Q8NGC7 330 aa16.92■□□□□ 0.3
RNF40-201ENST00000324685 IGKV1-6A0A0C4DH72 117 aa16.92■□□□□ 0.3
RNF40-201ENST00000324685 ZNF561-AS1K7EIQ3 104 aa16.92■□□□□ 0.3
RNF40-201ENST00000324685 CEACAM8P31997 349 aaPredicted RBP16.91■□□□□ 0.3
RNF40-201ENST00000324685 TCF15Q12870 199 aa16.91■□□□□ 0.3
RNF40-201ENST00000324685 C9orf118A6NHY6 69 aa16.91■□□□□ 0.3
RNF40-201ENST00000324685 GAGE12JA6NER3 117 aa16.91■□□□□ 0.3
RNF40-201ENST00000324685 GAGE1Q13065 139 aa16.91■□□□□ 0.3
RNF40-201ENST00000324685 GAGE4Q13068 117 aa16.91■□□□□ 0.3
RNF40-201ENST00000324685 GAGE5Q13069 117 aa16.91■□□□□ 0.3
RNF40-201ENST00000324685 C9orf153Q5TBE3 101 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms