RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 CLDN34H7C241 214 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 BMPR1BO00238 502 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 PEX7O00628 323 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 SCGB2A1O75556 95 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 IGLV2-8P01709 118 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 SLC25A5P05141 298 aaKnown RBP14.17□□□□□ -0.14
USP39-201ENST00000323701 ARL3P36405 182 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 UNQ9165/PRO28630Q6UXU0 137 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 FAM210BQ96KR6 192 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 IGF2BP2-AS1Q96M15 143 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 GAR1Q9NY12 217 aaKnown RBP14.17□□□□□ -0.14
USP39-201ENST00000323701 EPDR1Q9UM22 224 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 RPH3ALQ9UNE2 315 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 ISLRO14498 428 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 SRP14P37108 136 aaKnown RBP14.17□□□□□ -0.14
USP39-201ENST00000323701 DEFA6Q01524 100 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 OR5I1Q13606 314 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 PYY3Q5JQD4 70 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 NHLRC2Q8NBF2 726 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 OR4X2Q8NGF9 303 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 USMG5Q96IX5 58 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 PRSS22Q9GZN4 317 aa14.17□□□□□ -0.14
USP39-201ENST00000323701 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.16□□□□□ -0.14
USP39-201ENST00000323701 C9JCJ5 164 aa14.16□□□□□ -0.14
USP39-201ENST00000323701 S100A2P29034 98 aa14.16□□□□□ -0.14
USP39-201ENST00000323701 SIGLEC15Q6ZMC9 328 aa14.16□□□□□ -0.14
USP39-201ENST00000323701 Q71RC1 249 aaPredicted RBP14.16□□□□□ -0.14
USP39-201ENST00000323701 OR4F17Q8NGA8 305 aa14.16□□□□□ -0.14
USP39-201ENST00000323701 ESM1Q9NQ30 184 aa14.16□□□□□ -0.14
USP39-201ENST00000323701 NPFFR1Q9GZQ6 430 aa14.16□□□□□ -0.14
USP39-201ENST00000323701 BUB3O43684 328 aa14.15□□□□□ -0.14
USP39-201ENST00000323701 GNG4P50150 75 aa14.15□□□□□ -0.14
USP39-201ENST00000323701 PHOX2AO14813 284 aa14.15□□□□□ -0.15
USP39-201ENST00000323701 RPLP1P05386 114 aaKnown RBP14.15□□□□□ -0.15
USP39-201ENST00000323701 OR8I2Q8N0Y5 310 aa14.15□□□□□ -0.15
USP39-201ENST00000323701 FRZBQ92765 325 aa14.15□□□□□ -0.15
USP39-201ENST00000323701 HIVEP1P15822 2718 aa14.14□□□□□ -0.15
USP39-201ENST00000323701 RELQ04864 619 aaPredicted RBP14.14□□□□□ -0.15
USP39-201ENST00000323701 GFI1BQ5VTD9 330 aa14.14□□□□□ -0.15
USP39-201ENST00000323701 IGFL4Q6B9Z1 124 aa14.14□□□□□ -0.15
USP39-201ENST00000323701 ATP6V0BQ99437 205 aa14.14□□□□□ -0.15
USP39-201ENST00000323701 OTORQ9NRC9 128 aa14.14□□□□□ -0.15
USP39-201ENST00000323701 DNAJC9-AS1A6NH13 148 aa14.13□□□□□ -0.15
USP39-201ENST00000323701 M0R3E3 92 aa14.13□□□□□ -0.15
USP39-201ENST00000323701 TCRAP04437 139 aa14.13□□□□□ -0.15
USP39-201ENST00000323701 TRGC1P0CF51 173 aa14.13□□□□□ -0.15
USP39-201ENST00000323701 TEX38Q6PEX7 206 aa14.13□□□□□ -0.15
USP39-201ENST00000323701 C5orf17Q8NAS9 161 aa14.13□□□□□ -0.15
USP39-201ENST00000323701 SFRP2Q96HF1 295 aa14.13□□□□□ -0.15
USP39-201ENST00000323701 SERTAD4Q9NUC0 356 aa14.13□□□□□ -0.15
USP39-201ENST00000323701 CDC42EP3Q9UKI2 254 aa14.13□□□□□ -0.15
USP39-201ENST00000323701 HIVEP2P31629 2446 aa14.13□□□□□ -0.15
USP39-201ENST00000323701 TRAV8-1A0A0A6YYK1 113 aa14.13□□□□□ -0.15
USP39-201ENST00000323701 CTDSP1Q9GZU7 261 aa14.13□□□□□ -0.15
USP39-201ENST00000323701 TRBV24-1A0A075B6N3 115 aa14.12□□□□□ -0.15
USP39-201ENST00000323701 FAM181BA6NEQ2 426 aa14.12□□□□□ -0.15
USP39-201ENST00000323701 H7BYZ3 331 aa14.12□□□□□ -0.15
USP39-201ENST00000323701 DNLZQ5SXM8 178 aa14.12□□□□□ -0.15
USP39-201ENST00000323701 A0A0G2JLM5 398 aa14.12□□□□□ -0.15
USP39-201ENST00000323701 PFN1P07737 140 aaKnown RBP14.12□□□□□ -0.15
USP39-201ENST00000323701 RPL7P18124 248 aaKnown RBP14.12□□□□□ -0.15
USP39-201ENST00000323701 CNN1P51911 297 aaKnown RBP14.12□□□□□ -0.15
USP39-201ENST00000323701 HIST2H2BDQ6DRA6 164 aa14.12□□□□□ -0.15
USP39-201ENST00000323701 Q8N2B8 174 aa14.12□□□□□ -0.15
USP39-201ENST00000323701 ASCL2Q99929 193 aa14.12□□□□□ -0.15
USP39-201ENST00000323701 ATG101Q9BSB4 218 aa14.12□□□□□ -0.15
USP39-201ENST00000323701 KLF12Q9Y4X4 402 aa14.12□□□□□ -0.15
USP39-201ENST00000323701 U3KQE9 123 aa14.12□□□□□ -0.15
USP39-201ENST00000323701 HLA-DMBP28068 263 aa14.11□□□□□ -0.15
USP39-201ENST00000323701 RNASE7Q9H1E1 156 aaKnown RBP14.11□□□□□ -0.15
USP39-201ENST00000323701 LY96Q9Y6Y9 160 aa14.11□□□□□ -0.15
USP39-201ENST00000323701 EDN2P20800 178 aa14.1□□□□□ -0.15
USP39-201ENST00000323701 TMEM183BQ1AE95 376 aa14.1□□□□□ -0.15
USP39-201ENST00000323701 GOLT1AQ6ZVE7 132 aa14.1□□□□□ -0.15
USP39-201ENST00000323701 S100A7AQ86SG5 101 aa14.1□□□□□ -0.15
USP39-201ENST00000323701 METTL26Q96S19 204 aa14.1□□□□□ -0.15
USP39-201ENST00000323701 IGLV2-11P01706 119 aa14.1□□□□□ -0.15
USP39-201ENST00000323701 TAS2R60P59551 318 aa14.1□□□□□ -0.15
USP39-201ENST00000323701 PDZD11Q5EBL8 140 aa14.1□□□□□ -0.15
USP39-201ENST00000323701 ANAPC16Q96DE5 110 aa14.1□□□□□ -0.15
USP39-201ENST00000323701 MGST1P10620 155 aaKnown RBP14.09□□□□□ -0.15
USP39-201ENST00000323701 GALR1P47211 349 aa14.09□□□□□ -0.15
USP39-201ENST00000323701 FAM3BP58499 235 aaPredicted RBP14.09□□□□□ -0.15
USP39-201ENST00000323701 CDPF1Q6NVV7 123 aa14.09□□□□□ -0.15
USP39-201ENST00000323701 BAGE2Q86Y30 109 aa14.09□□□□□ -0.15
USP39-201ENST00000323701 TEX29Q8N6K0 151 aa14.09□□□□□ -0.15
USP39-201ENST00000323701 C14orf144Q96I85 54 aa14.09□□□□□ -0.15
USP39-201ENST00000323701 SELENOKQ9Y6D0 94 aa14.09□□□□□ -0.15
USP39-201ENST00000323701 NSD1Q96L73 2696 aaPredicted RBP14.09□□□□□ -0.15
USP39-201ENST00000323701 NDUFA4O00483 81 aa14.09□□□□□ -0.15
USP39-201ENST00000323701 HIST3H2BBQ8N257 126 aa14.09□□□□□ -0.15
USP39-201ENST00000323701 TMEM86BQ8N661 226 aa14.09□□□□□ -0.15
USP39-201ENST00000323701 PYGO2Q9BRQ0 406 aa14.09□□□□□ -0.15
USP39-201ENST00000323701 GPR61Q9BZJ8 451 aa14.09□□□□□ -0.15
USP39-201ENST00000323701 PEF1Q9UBV8 284 aaKnown RBP14.09□□□□□ -0.15
USP39-201ENST00000323701 RNF24Q9Y225 148 aa14.09□□□□□ -0.15
USP39-201ENST00000323701 ZNF320A2RRD8 509 aa14.08□□□□□ -0.16
USP39-201ENST00000323701 GCGP01275 180 aa14.08□□□□□ -0.16
USP39-201ENST00000323701 CD99P14209 185 aa14.08□□□□□ -0.16
USP39-201ENST00000323701 PDE6HQ13956 83 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms