RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 DKK2Q9UBU2 259 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 AGRNO00468 2067 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 CKS2P33552 79 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 MZT1Q08AG7 82 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 GAFA1Q96PS6 74 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 NHP2Q9NX24 153 aaKnown RBP11.37□□□□□ -0.59
PABPC1-201ENST00000318607 HIGD1AQ9Y241 93 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 PCSK5Q92824 1860 aa11.36□□□□□ -0.59
PABPC1-201ENST00000318607 IL4P05112 153 aa11.36□□□□□ -0.59
PABPC1-201ENST00000318607 MC5RP33032 325 aa11.36□□□□□ -0.59
PABPC1-201ENST00000318607 OR4C13Q8NGP0 309 aa11.36□□□□□ -0.59
PABPC1-201ENST00000318607 RASL11BQ9BPW5 248 aa11.36□□□□□ -0.59
PABPC1-201ENST00000318607 LY6HO94772 140 aa11.36□□□□□ -0.59
PABPC1-201ENST00000318607 RPL27AP46776 148 aaKnown RBP11.36□□□□□ -0.59
PABPC1-201ENST00000318607 RHOGP84095 191 aa11.36□□□□□ -0.59
PABPC1-201ENST00000318607 HIST1H1AQ02539 215 aaPredicted RBP11.36□□□□□ -0.59
PABPC1-201ENST00000318607 VMA21Q3ZAQ7 101 aa11.36□□□□□ -0.59
PABPC1-201ENST00000318607 MRPL32Q9BYC8 188 aaKnown RBP11.36□□□□□ -0.59
PABPC1-201ENST00000318607 CSTL1Q9H114 145 aa11.36□□□□□ -0.59
PABPC1-201ENST00000318607 IGKV2-40A0A087WW87 121 aaPredicted RBP11.36□□□□□ -0.59
PABPC1-201ENST00000318607 A0A1B0GW15 77 aa11.36□□□□□ -0.59
PABPC1-201ENST00000318607 A1L4Q6 167 aa11.36□□□□□ -0.59
PABPC1-201ENST00000318607 IGKV2D-40P01614 121 aaPredicted RBP11.36□□□□□ -0.59
PABPC1-201ENST00000318607 CEACAM3P40198 252 aa11.36□□□□□ -0.59
PABPC1-201ENST00000318607 GTF2H5Q6ZYL4 71 aa11.36□□□□□ -0.59
PABPC1-201ENST00000318607 PTPN13Q12923 2485 aa11.35□□□□□ -0.59
PABPC1-201ENST00000318607 ADAMTS20P59510 1910 aa11.35□□□□□ -0.59
PABPC1-201ENST00000318607 TMEM200BQ69YZ2 307 aa11.35□□□□□ -0.59
PABPC1-201ENST00000318607 GTSCR1Q86UQ5 136 aa11.35□□□□□ -0.59
PABPC1-201ENST00000318607 TMEM133Q9H2Q1 129 aa11.35□□□□□ -0.59
PABPC1-201ENST00000318607 ZNF71Q9NQZ8 489 aaPredicted RBP11.35□□□□□ -0.59
PABPC1-201ENST00000318607 NDUFA4L2Q9NRX3 87 aa11.35□□□□□ -0.59
PABPC1-201ENST00000318607 MSRB1Q9NZV6 116 aa11.35□□□□□ -0.59
PABPC1-201ENST00000318607 DCHS2Q6V1P9 2916 aa11.35□□□□□ -0.59
PABPC1-201ENST00000318607 GATA1P15976 413 aaPredicted RBP11.35□□□□□ -0.59
PABPC1-201ENST00000318607 ZNF474Q6S9Z5 364 aaPredicted RBP11.35□□□□□ -0.59
PABPC1-201ENST00000318607 LYZL1Q6UWQ5 148 aa11.35□□□□□ -0.59
PABPC1-201ENST00000318607 PRELID3AQ96N28 172 aa11.35□□□□□ -0.59
PABPC1-201ENST00000318607 TMEM160Q9NX00 188 aa11.35□□□□□ -0.59
PABPC1-201ENST00000318607 IGKV1D-37A0A075B6S9 117 aa11.34□□□□□ -0.59
PABPC1-201ENST00000318607 NEU4Q8WWR8 484 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-201ENST00000318607 CACNG8Q8WXS5 425 aa11.34□□□□□ -0.59
PABPC1-201ENST00000318607 ZNF414Q96IQ9 312 aa11.34□□□□□ -0.59
PABPC1-201ENST00000318607 SCRT2Q9NQ03 307 aa11.34□□□□□ -0.59
PABPC1-201ENST00000318607 PLSCR4Q9NRQ2 329 aa11.34□□□□□ -0.59
PABPC1-201ENST00000318607 INSIG2Q9Y5U4 225 aa11.34□□□□□ -0.59
PABPC1-201ENST00000318607 IGKV3-7A0A075B6H7 116 aa11.34□□□□□ -0.59
PABPC1-201ENST00000318607 NDUFB3O43676 98 aa11.34□□□□□ -0.59
PABPC1-201ENST00000318607 UFC1Q9Y3C8 167 aa11.34□□□□□ -0.59
PABPC1-201ENST00000318607 CD5LO43866 347 aa11.33□□□□□ -0.6
PABPC1-201ENST00000318607 HLA-DMBP28068 263 aa11.33□□□□□ -0.6
PABPC1-201ENST00000318607 MYO9AB2RTY4 2548 aa11.33□□□□□ -0.6
PABPC1-201ENST00000318607 GAS8-AS1O95177 125 aa11.33□□□□□ -0.6
PABPC1-201ENST00000318607 RIGQ13278 110 aa11.33□□□□□ -0.6
PABPC1-201ENST00000318607 PSG3Q16557 428 aa11.33□□□□□ -0.6
PABPC1-201ENST00000318607 SLC25A48Q6ZT89 311 aaKnown RBP11.33□□□□□ -0.6
PABPC1-201ENST00000318607 FAM169BQ8N8A8 192 aa11.33□□□□□ -0.6
PABPC1-201ENST00000318607 TMEM186Q96B77 213 aa11.33□□□□□ -0.6
PABPC1-201ENST00000318607 HIF1ANQ9NWT6 349 aa11.33□□□□□ -0.6
PABPC1-201ENST00000318607 NACAE9PAV3 2078 aa11.33□□□□□ -0.6
PABPC1-201ENST00000318607 A6NDN8 102 aa11.33□□□□□ -0.6
PABPC1-201ENST00000318607 LTAP01374 205 aa11.33□□□□□ -0.6
PABPC1-201ENST00000318607 ZADH2Q8N4Q0 377 aa11.33□□□□□ -0.6
PABPC1-201ENST00000318607 TLN2Q9Y4G6 2542 aa11.33□□□□□ -0.6
PABPC1-201ENST00000318607 FAM90A9PA6NNJ1 464 aa11.32□□□□□ -0.6
PABPC1-201ENST00000318607 ZNF747Q9BV97 191 aa11.32□□□□□ -0.6
PABPC1-201ENST00000318607 PRR33A8MZF0 331 aa11.32□□□□□ -0.6
PABPC1-201ENST00000318607 NCBP2LA6PVI3 153 aaKnown RBP11.32□□□□□ -0.6
PABPC1-201ENST00000318607 SLC25A15Q9Y619 301 aa11.32□□□□□ -0.6
PABPC1-201ENST00000318607 FNDC10F2Z333 226 aa11.31□□□□□ -0.6
PABPC1-201ENST00000318607 PET117Q6UWS5 81 aa11.31□□□□□ -0.6
PABPC1-201ENST00000318607 SH2D6Q7Z4S9 175 aa11.31□□□□□ -0.6
PABPC1-201ENST00000318607 DEFB124Q8NES8 71 aa11.31□□□□□ -0.6
PABPC1-201ENST00000318607 OSR1Q8TAX0 266 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-201ENST00000318607 C19orf24Q9BVV8 132 aa11.31□□□□□ -0.6
PABPC1-201ENST00000318607 SLC25A39Q9BZJ4 359 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-201ENST00000318607 RAB9BQ9NP90 201 aa11.31□□□□□ -0.6
PABPC1-201ENST00000318607 USP9YO00507 2555 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-201ENST00000318607 TEX48A0A1B0GUV7 120 aa11.31□□□□□ -0.6
PABPC1-201ENST00000318607 TMEM189A5PLL7 270 aa11.31□□□□□ -0.6
PABPC1-201ENST00000318607 IGLC1P0CG04 106 aa11.31□□□□□ -0.6
PABPC1-201ENST00000318607 FABP2P12104 132 aa11.31□□□□□ -0.6
PABPC1-201ENST00000318607 IGF2-ASQ6U949 168 aa11.31□□□□□ -0.6
PABPC1-201ENST00000318607 Q86TA4 180 aa11.31□□□□□ -0.6
PABPC1-201ENST00000318607 SIGLEC8Q9NYZ4 499 aa11.31□□□□□ -0.6
PABPC1-201ENST00000318607 PSG8Q9UQ74 426 aa11.31□□□□□ -0.6
PABPC1-201ENST00000318607 PPIAL4CA0A0B4J2A2 164 aa11.3□□□□□ -0.6
PABPC1-201ENST00000318607 PPIAL4GP0DN37 164 aa11.3□□□□□ -0.6
PABPC1-201ENST00000318607 GLRXP35754 106 aa11.3□□□□□ -0.6
PABPC1-201ENST00000318607 KLF5Q13887 457 aaPredicted RBP11.3□□□□□ -0.6
PABPC1-201ENST00000318607 C2orf91Q6ZV80 131 aa11.3□□□□□ -0.6
PABPC1-201ENST00000318607 ONECUT1Q9UBC0 465 aa11.3□□□□□ -0.6
PABPC1-201ENST00000318607 A0A1B0GXF2 115 aa11.3□□□□□ -0.6
PABPC1-201ENST00000318607 COX8AP10176 69 aa11.3□□□□□ -0.6
PABPC1-201ENST00000318607 ZNF788Q6ZQV5 615 aa11.3□□□□□ -0.6
PABPC1-201ENST00000318607 CHCHD1Q96BP2 118 aaKnown RBP11.3□□□□□ -0.6
PABPC1-201ENST00000318607 CELSR1Q9NYQ6 3014 aa11.3□□□□□ -0.6
PABPC1-201ENST00000318607 FAM162BQ5T6X4 162 aa11.3□□□□□ -0.6
PABPC1-201ENST00000318607 FOXC2Q99958 501 aa11.3□□□□□ -0.6
PABPC1-201ENST00000318607 WNK1Q9H4A3 2382 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms