RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 SUMO2P61956 95 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-201ENST00000317968 CDSNQ15517 529 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 TMEM191AQ9H0A3 160 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 NAV2Q8IVL1 2488 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 EIF3GO75821 320 aaKnown RBP eCLIP6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 SCGB1C2P0DMR2 95 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 ZFP36P26651 326 aaKnown RBP6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 LINC00205P59089 165 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 C1orf194Q5T5A4 169 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 SCGB1D4Q6XE38 83 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 LYPD6BQ8NI32 183 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 LSM4Q9Y4Z0 139 aaKnown RBP6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 M0R381 172 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 PEX7O00628 323 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 CSN3P07498 182 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 DEFB131AP59861 70 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 TCTEX1D4Q5JR98 221 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 OR2K2Q8NGT1 345 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 MRAP2Q96G30 205 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 MED13LQ71F56 2210 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 TRGV1A0A0A0MS02 117 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 IGLV2-23P01705 113 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 AJUBAQ96IF1 538 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 SMAD5-AS1Q9Y6J3 95 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 IGHV3OR16-8A0A075B7F1 116 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 M0R2Z0 102 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 GP9P14770 177 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 OR10J3Q5JRS4 329 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 GLMPQ8WWB7 406 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 CHCHD5Q9BSY4 110 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 RFNGQ9Y644 331 aa6.79□□□□□ -1.32
PDLIM5-201ENST00000317968 PRR20EP86478 221 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 PRR20CP86479 221 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 PRR20DP86480 221 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 PRR20BP86481 221 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 PRR20AP86496 221 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 OR8A1Q8NGG7 326 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 NRGNQ92686 78 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 SMIM12Q96EX1 92 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 M0R3E3 92 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 LY6G6DO95868 133 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 IGHV4-31P0DP07 118 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 PSG1P11464 419 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 PLP1P60201 277 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 MRPL54Q6P161 138 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 LOC102724200A0A096LPH7 203 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 VWC2LB2RUY7 222 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 INAFM1C9JVW0 142 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 F5H768 121 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 CCL20P78556 96 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 COTL1Q14019 142 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 BATFQ16520 125 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 PARLQ9H300 379 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 ZNRD1Q9P1U0 126 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 BPTFQ12830 3046 aa6.78□□□□□ -1.32
PDLIM5-201ENST00000317968 H3BTX0 84 aa6.77□□□□□ -1.32
PDLIM5-201ENST00000317968 NDUFB4O95168 129 aa6.77□□□□□ -1.32
PDLIM5-201ENST00000317968 BRWD1-AS2P59051 145 aa6.77□□□□□ -1.32
PDLIM5-201ENST00000317968 MEIG1Q5JSS6 88 aa6.77□□□□□ -1.32
PDLIM5-201ENST00000317968 ZNF705AQ6ZN79 300 aaPredicted RBP6.77□□□□□ -1.32
PDLIM5-201ENST00000317968 TMEM242Q9NWH2 141 aa6.77□□□□□ -1.32
PDLIM5-201ENST00000317968 TMEM14CQ9P0S9 112 aa6.77□□□□□ -1.32
PDLIM5-201ENST00000317968 PMS2P5A8MQ11 134 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 SRIP30626 198 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 NMUP48645 174 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 TRBV20OR9-2A0A075B6H5 130 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 CRYBB3P26998 211 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 KRTDAPP60985 99 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 MIR17HGQ75NE6 70 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 FER1L6-AS1Q8NA97 138 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 CFHR4Q92496 578 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 TNRC18O15417 2968 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 APOMO95445 188 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 PGLYRP4Q96LB8 373 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 ST20Q9HBF5 79 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 TRAV25A0A0B4J276 109 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 DNAJC9-AS1A6NH13 148 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 PCP4L1A6NKN8 68 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 F2Z2F3 143 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 DIAPH2-AS1Q14236 149 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 REC114Q7Z4M0 266 aa6.77□□□□□ -1.33
PDLIM5-201ENST00000317968 ADARB2-AS1A8MUL3 147 aa6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 HLA-DQA1P01909 254 aa6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 LGALS3P17931 250 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 DOCK11Q5JSL3 2073 aa6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 SHANK2-AS3Q9BTD1 123 aa6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 GSX1Q9H4S2 264 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 ZNF253O75346 499 aa6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 CRYGBP07316 175 aa6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 ZNF138P52744 262 aa6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 SNRPCP09234 159 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 IGHV4-38-2P0DP08 117 aa6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 PPIFP30405 207 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 FBLN7Q53RD9 439 aa6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 Q8N9W7 124 aa6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 C4orf3Q8WVX3 66 aa6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 CYYR1Q96J86 154 aa6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 UBE2E2Q96LR5 201 aa6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 SPAG8Q99932 426 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 FCN3O75636 299 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms