RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 TVP23CQ96ET8 276 aa17.2■□□□□ 0.34
IRF3-201ENST00000309877 TSSC4Q9Y5U2 329 aaPredicted RBP17.2■□□□□ 0.34
IRF3-201ENST00000309877 SETXQ7Z333 2677 aaKnown RBP17.2■□□□□ 0.34
IRF3-201ENST00000309877 PSG9Q00887 426 aa17.2■□□□□ 0.34
IRF3-201ENST00000309877 HIST2H2BDQ6DRA6 164 aa17.2■□□□□ 0.34
IRF3-201ENST00000309877 EXOC3-AS1Q8N2X6 119 aa17.2■□□□□ 0.34
IRF3-201ENST00000309877 C5orf17Q8NAS9 161 aa17.2■□□□□ 0.34
IRF3-201ENST00000309877 CLRN3Q8NCR9 226 aa17.2■□□□□ 0.34
IRF3-201ENST00000309877 DERL1Q9BUN8 251 aa17.2■□□□□ 0.34
IRF3-201ENST00000309877 EPDR1Q9UM22 224 aa17.2■□□□□ 0.34
IRF3-201ENST00000309877 A0A087X0K7 114 aa17.19■□□□□ 0.34
IRF3-201ENST00000309877 LGALS9O00182 355 aa17.19■□□□□ 0.34
IRF3-201ENST00000309877 SLC17A3O00476 420 aa17.19■□□□□ 0.34
IRF3-201ENST00000309877 TMEM241Q24JQ0 296 aa17.19■□□□□ 0.34
IRF3-201ENST00000309877 SIGLEC15Q6ZMC9 328 aa17.19■□□□□ 0.34
IRF3-201ENST00000309877 C1QL4Q86Z23 238 aa17.19■□□□□ 0.34
IRF3-201ENST00000309877 CMTM2Q8TAZ6 248 aa17.19■□□□□ 0.34
IRF3-201ENST00000309877 GLMPQ8WWB7 406 aa17.19■□□□□ 0.34
IRF3-201ENST00000309877 HIST1H2BAQ96A08 127 aa17.19■□□□□ 0.34
IRF3-201ENST00000309877 CITED2Q99967 270 aaPredicted RBP17.19■□□□□ 0.34
IRF3-201ENST00000309877 RHPN1-AS1Q9BWJ2 59 aa17.19■□□□□ 0.34
IRF3-201ENST00000309877 AAMDCQ9H7C9 122 aa17.19■□□□□ 0.34
IRF3-201ENST00000309877 NAT8Q9UHE5 227 aa17.19■□□□□ 0.34
IRF3-201ENST00000309877 SMPXQ9UHP9 88 aa17.19■□□□□ 0.34
IRF3-201ENST00000309877 F8P00451 2351 aa17.18■□□□□ 0.34
IRF3-201ENST00000309877 A0A1W2PRX2 142 aa17.18■□□□□ 0.34
IRF3-201ENST00000309877 PEX7O00628 323 aa17.18■□□□□ 0.34
IRF3-201ENST00000309877 BMI1P35226 326 aa17.18■□□□□ 0.34
IRF3-201ENST00000309877 ATRAIDQ6UW56 229 aa17.18■□□□□ 0.34
IRF3-201ENST00000309877 C8orf86Q6ZUL3 223 aa17.18■□□□□ 0.34
IRF3-201ENST00000309877 RPH3ALQ9UNE2 315 aa17.18■□□□□ 0.34
IRF3-201ENST00000309877 AKR1C3P42330 323 aa17.17■□□□□ 0.34
IRF3-201ENST00000309877 SLURP1P55000 103 aa17.17■□□□□ 0.34
IRF3-201ENST00000309877 GNG5P63218 68 aa17.17■□□□□ 0.34
IRF3-201ENST00000309877 KLF5Q13887 457 aaPredicted RBP17.17■□□□□ 0.34
IRF3-201ENST00000309877 C2CD4CQ8TF44 421 aa17.17■□□□□ 0.34
IRF3-201ENST00000309877 HELTA6NFD8 242 aa17.16■□□□□ 0.34
IRF3-201ENST00000309877 ZNF253O75346 499 aa17.16■□□□□ 0.34
IRF3-201ENST00000309877 SCO1O75880 301 aa17.16■□□□□ 0.34
IRF3-201ENST00000309877 RPL35P42766 123 aaKnown RBP17.16■□□□□ 0.34
IRF3-201ENST00000309877 MEOX2P50222 304 aa17.16■□□□□ 0.34
IRF3-201ENST00000309877 SDF2L1Q9HCN8 221 aa17.16■□□□□ 0.34
IRF3-201ENST00000309877 A0A1B0GUS0 222 aa17.16■□□□□ 0.34
IRF3-201ENST00000309877 A8MWP6 167 aa17.16■□□□□ 0.34
IRF3-201ENST00000309877 CHEK1O14757 476 aa17.16■□□□□ 0.34
IRF3-201ENST00000309877 CNN1P51911 297 aaKnown RBP17.16■□□□□ 0.34
IRF3-201ENST00000309877 PNRC1Q12796 327 aaPredicted RBP17.16■□□□□ 0.34
IRF3-201ENST00000309877 AWAT1Q58HT5 328 aa17.16■□□□□ 0.34
IRF3-201ENST00000309877 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.16■□□□□ 0.34
IRF3-201ENST00000309877 DUX3Q96PT4 197 aa17.16■□□□□ 0.34
IRF3-201ENST00000309877 NF1P21359 2839 aa17.15■□□□□ 0.34
IRF3-201ENST00000309877 TMEM213A2RRL7 107 aa17.15■□□□□ 0.34
IRF3-201ENST00000309877 ATG101Q9BSB4 218 aa17.15■□□□□ 0.34
IRF3-201ENST00000309877 RPL11P62913 178 aaKnown RBP17.14■□□□□ 0.33
IRF3-201ENST00000309877 ZNF331Q9NQX6 463 aaPredicted RBP17.14■□□□□ 0.33
IRF3-201ENST00000309877 TCRAP04437 139 aa17.13■□□□□ 0.33
IRF3-201ENST00000309877 EDN2P20800 178 aa17.13■□□□□ 0.33
IRF3-201ENST00000309877 ADIRFQ15847 76 aa17.13■□□□□ 0.33
IRF3-201ENST00000309877 SLC50A1Q9BRV3 221 aa17.13■□□□□ 0.33
IRF3-201ENST00000309877 CSN1S1P47710 185 aa17.13■□□□□ 0.33
IRF3-201ENST00000309877 RHEBQ15382 184 aa17.13■□□□□ 0.33
IRF3-201ENST00000309877 RAX2Q96IS3 184 aa17.13■□□□□ 0.33
IRF3-201ENST00000309877 LINC00479Q96M42 142 aa17.13■□□□□ 0.33
IRF3-201ENST00000309877 GNG4P50150 75 aa17.12■□□□□ 0.33
IRF3-201ENST00000309877 RPS10P5Q9NQ39 176 aa17.12■□□□□ 0.33
IRF3-201ENST00000309877 PEMTQ9UBM1 199 aa17.12■□□□□ 0.33
IRF3-201ENST00000309877 TRAV34A0A0B4J273 112 aa17.11■□□□□ 0.33
IRF3-201ENST00000309877 C7orf77A4D0Y5 90 aa17.11■□□□□ 0.33
IRF3-201ENST00000309877 C2orf70A6NJV1 201 aa17.11■□□□□ 0.33
IRF3-201ENST00000309877 C9JCJ5 164 aa17.11■□□□□ 0.33
IRF3-201ENST00000309877 M0QZ24 198 aa17.11■□□□□ 0.33
IRF3-201ENST00000309877 CCL24O00175 119 aa17.11■□□□□ 0.33
IRF3-201ENST00000309877 TAS2R60P59551 318 aa17.11■□□□□ 0.33
IRF3-201ENST00000309877 UBE2G1P62253 170 aa17.11■□□□□ 0.33
IRF3-201ENST00000309877 RPL23P62829 140 aaKnown RBP17.11■□□□□ 0.33
IRF3-201ENST00000309877 TRBV20OR9-2A0A075B6H5 130 aa17.1■□□□□ 0.33
IRF3-201ENST00000309877 M0R3E3 92 aa17.1■□□□□ 0.33
IRF3-201ENST00000309877 CBLN1P23435 193 aa17.1■□□□□ 0.33
IRF3-201ENST00000309877 CENPWQ5EE01 88 aa17.1■□□□□ 0.33
IRF3-201ENST00000309877 IGFL4Q6B9Z1 124 aa17.1■□□□□ 0.33
IRF3-201ENST00000309877 GOLT1AQ6ZVE7 132 aa17.1■□□□□ 0.33
IRF3-201ENST00000309877 TCF24Q7RTU0 167 aa17.1■□□□□ 0.33
IRF3-201ENST00000309877 DLX4Q92988 240 aaPredicted RBP17.1■□□□□ 0.33
IRF3-201ENST00000309877 B4DEV8 164 aa17.1■□□□□ 0.33
IRF3-201ENST00000309877 K7EQM0 130 aa17.1■□□□□ 0.33
IRF3-201ENST00000309877 S100A9P06702 114 aaKnown RBP17.1■□□□□ 0.33
IRF3-201ENST00000309877 FOXL1Q12952 345 aa17.1■□□□□ 0.33
IRF3-201ENST00000309877 TMEM183BQ1AE95 376 aa17.1■□□□□ 0.33
IRF3-201ENST00000309877 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.1■□□□□ 0.33
IRF3-201ENST00000309877 C16orf92Q96LL3 132 aa17.1■□□□□ 0.33
IRF3-201ENST00000309877 PGPEP1LA6NFU8 196 aa17.09■□□□□ 0.33
IRF3-201ENST00000309877 FOLR2P14207 255 aa17.09■□□□□ 0.33
IRF3-201ENST00000309877 NSUN5P1Q3KNT7 163 aa17.09■□□□□ 0.33
IRF3-201ENST00000309877 LINC01551Q86U37 167 aa17.09■□□□□ 0.33
IRF3-201ENST00000309877 ARL6IP6Q8N6S5 226 aa17.09■□□□□ 0.33
IRF3-201ENST00000309877 OR9G4Q8NGQ1 327 aa17.09■□□□□ 0.33
IRF3-201ENST00000309877 FMC1Q96HJ9 113 aa17.09■□□□□ 0.33
IRF3-201ENST00000309877 NRN1Q9NPD7 142 aa17.09■□□□□ 0.33
IRF3-201ENST00000309877 KLF12Q9Y4X4 402 aa17.09■□□□□ 0.33
IRF3-201ENST00000309877 SELENOKQ9Y6D0 94 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms