RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 PSMG4Q5JS54 123 aa13.31□□□□□ -0.28
SSSCA1-201ENST00000309328 FAM167A-AS1Q96KT0 104 aa13.31□□□□□ -0.28
SSSCA1-201ENST00000309328 PAXXQ9BUH6 204 aa13.31□□□□□ -0.28
SSSCA1-201ENST00000309328 SLC25A2Q9BXI2 301 aa13.31□□□□□ -0.28
SSSCA1-201ENST00000309328 OR51M1Q9H341 326 aa13.31□□□□□ -0.28
SSSCA1-201ENST00000309328 RPRMQ9NS64 109 aa13.31□□□□□ -0.28
SSSCA1-201ENST00000309328 TRAV5A0A0B4J249 113 aa13.3□□□□□ -0.28
SSSCA1-201ENST00000309328 PSG9Q00887 426 aa13.3□□□□□ -0.28
SSSCA1-201ENST00000309328 DPPA3Q6W0C5 159 aa13.3□□□□□ -0.28
SSSCA1-201ENST00000309328 C9orf62Q8N4C0 152 aa13.3□□□□□ -0.28
SSSCA1-201ENST00000309328 RPP25LQ8N5L8 163 aaKnown RBP13.3□□□□□ -0.28
SSSCA1-201ENST00000309328 DEFB125Q8N687 156 aa13.3□□□□□ -0.28
SSSCA1-201ENST00000309328 UBQLN2Q9UHD9 624 aa13.3□□□□□ -0.28
SSSCA1-201ENST00000309328 TRBV19A0A075B6N1 114 aa13.29□□□□□ -0.28
SSSCA1-201ENST00000309328 RAB5CP51148 216 aa13.29□□□□□ -0.28
SSSCA1-201ENST00000309328 CD300CQ08708 224 aa13.29□□□□□ -0.28
SSSCA1-201ENST00000309328 FAM122CQ6P4D5 195 aa13.29□□□□□ -0.28
SSSCA1-201ENST00000309328 FAM24BQ8N5W8 94 aa13.29□□□□□ -0.28
SSSCA1-201ENST00000309328 ZNF331Q9NQX6 463 aaPredicted RBP13.29□□□□□ -0.28
SSSCA1-201ENST00000309328 LOC102724200A0A096LPH7 203 aaPredicted RBP13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 CTXND1A0A1B0GTU2 59 aa13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 NBEAP1P0C6P0 100 aa13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 FRMD6-AS1P0C7T7 363 aa13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 APOC4P55056 127 aa13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 UBE2L3P68036 154 aaKnown RBP13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 FOXI2Q6ZQN5 318 aa13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 STHQ8IWL8 128 aa13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 LYPD1Q8N2G4 141 aa13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 RNF141Q8WVD5 230 aa13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 RAB24Q969Q5 203 aa13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 C17orf77Q96MU5 243 aa13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 LINC00052Q96N35 136 aa13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 B9D2Q9BPU9 175 aa13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 PRELID1Q9Y255 219 aa13.28□□□□□ -0.28
SSSCA1-201ENST00000309328 KIR2DL5BA0A0G2JN68 375 aa13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 KIR2DL5BA0A0G2JPC4 375 aa13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 H3BQ15 152 aa13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 CXorf1O96002 111 aa13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 STAG3L2P0CL84 134 aa13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 STAG3L3P0CL85 134 aa13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 EBLN2Q6P2I7 272 aa13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 APRG1Q8IVJ8 170 aa13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 KIR2DL5AQ8N109 375 aa13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 KIR2DL5BQ8NHK3 375 aa13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 MRPL53Q96EL3 112 aaKnown RBP13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 SAT2Q96F10 170 aaPredicted RBP13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 AAMDCQ9H7C9 122 aa13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 ZNF586Q9NXT0 402 aa13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 RFNGQ9Y644 331 aa13.27□□□□□ -0.29
SSSCA1-201ENST00000309328 UBE2CO00762 179 aa13.26□□□□□ -0.29
SSSCA1-201ENST00000309328 PYYP10082 97 aa13.26□□□□□ -0.29
SSSCA1-201ENST00000309328 LINC00322Q6ZN03 302 aaPredicted RBP13.26□□□□□ -0.29
SSSCA1-201ENST00000309328 FXYD5Q96DB9 178 aa13.26□□□□□ -0.29
SSSCA1-201ENST00000309328 PHYHIPLQ96FC7 376 aa13.26□□□□□ -0.29
SSSCA1-201ENST00000309328 CLUHP3Q96NS8 147 aa13.26□□□□□ -0.29
SSSCA1-201ENST00000309328 WFDC10AQ9H1F0 79 aa13.26□□□□□ -0.29
SSSCA1-201ENST00000309328 TMEM167BQ9NRX6 74 aa13.26□□□□□ -0.29
SSSCA1-201ENST00000309328 TRAV8-2A0A0B4J237 113 aa13.25□□□□□ -0.29
SSSCA1-201ENST00000309328 NHLRC4P0CG21 123 aaPredicted RBP13.25□□□□□ -0.29
SSSCA1-201ENST00000309328 HLA-DRB4P13762 266 aa13.25□□□□□ -0.29
SSSCA1-201ENST00000309328 NUTF2P61970 127 aaKnown RBP13.25□□□□□ -0.29
SSSCA1-201ENST00000309328 PSG3Q16557 428 aa13.25□□□□□ -0.29
SSSCA1-201ENST00000309328 ZNF738Q8NE65 137 aa13.25□□□□□ -0.29
SSSCA1-201ENST00000309328 SAV1Q9H4B6 383 aaPredicted RBP13.25□□□□□ -0.29
SSSCA1-201ENST00000309328 HLA-DRB4X5D2U9 266 aa13.25□□□□□ -0.29
SSSCA1-201ENST00000309328 DUSP14O95147 198 aaKnown RBP13.24□□□□□ -0.29
SSSCA1-201ENST00000309328 ACTL10Q5JWF8 245 aa13.24□□□□□ -0.29
SSSCA1-201ENST00000309328 FAM74A1Q5RGS3 127 aa13.24□□□□□ -0.29
SSSCA1-201ENST00000309328 MORN3Q6PF18 240 aaPredicted RBP13.24□□□□□ -0.29
SSSCA1-201ENST00000309328 BLNKQ8WV28 456 aa13.24□□□□□ -0.29
SSSCA1-201ENST00000309328 TMED6Q8WW62 240 aa13.24□□□□□ -0.29
SSSCA1-201ENST00000309328 RBMY1BA6NDE4 496 aaKnown RBP13.23□□□□□ -0.29
SSSCA1-201ENST00000309328 RBMY1EA6NEQ0 496 aaKnown RBP13.23□□□□□ -0.29
SSSCA1-201ENST00000309328 OR10J4P0C629 311 aa13.23□□□□□ -0.29
SSSCA1-201ENST00000309328 RBMY1DP0C7P1 496 aaKnown RBP13.23□□□□□ -0.29
SSSCA1-201ENST00000309328 ARL14EPLP0DKL9 152 aa13.23□□□□□ -0.29
SSSCA1-201ENST00000309328 ARL6IP6Q8N6S5 226 aa13.23□□□□□ -0.29
SSSCA1-201ENST00000309328 ZNF503Q96F45 646 aa13.23□□□□□ -0.29
SSSCA1-201ENST00000309328 CITED4Q96RK1 184 aa13.23□□□□□ -0.29
SSSCA1-201ENST00000309328 H3BMM0 161 aa13.22□□□□□ -0.29
SSSCA1-201ENST00000309328 TEX46H3BTG2 121 aa13.22□□□□□ -0.29
SSSCA1-201ENST00000309328 SLC17A3O00476 420 aa13.22□□□□□ -0.29
SSSCA1-201ENST00000309328 GCHFRP30047 84 aa13.22□□□□□ -0.29
SSSCA1-201ENST00000309328 TRPT1Q86TN4 253 aaKnown RBP13.22□□□□□ -0.29
SSSCA1-201ENST00000309328 SUN5Q8TC36 379 aa13.22□□□□□ -0.29
SSSCA1-201ENST00000309328 RPUSD4Q96CM3 377 aaKnown RBP13.22□□□□□ -0.29
SSSCA1-201ENST00000309328 A0A0J9YX75 114 aa13.21□□□□□ -0.29
SSSCA1-201ENST00000309328 MAP1LC3B2A6NCE7 125 aa13.21□□□□□ -0.29
SSSCA1-201ENST00000309328 NDUFB4O95168 129 aa13.21□□□□□ -0.29
SSSCA1-201ENST00000309328 CSN1S1P47710 185 aa13.21□□□□□ -0.29
SSSCA1-201ENST00000309328 RNF182Q8N6D2 247 aa13.21□□□□□ -0.29
SSSCA1-201ENST00000309328 RXFP4Q8TDU9 374 aa13.21□□□□□ -0.29
SSSCA1-201ENST00000309328 C20orf173Q96LM9 149 aa13.21□□□□□ -0.29
SSSCA1-201ENST00000309328 C1QTNF4Q9BXJ3 329 aa13.21□□□□□ -0.29
SSSCA1-201ENST00000309328 NKX6-2Q9C056 277 aaPredicted RBP13.21□□□□□ -0.29
SSSCA1-201ENST00000309328 MAP1LC3BQ9GZQ8 125 aa13.21□□□□□ -0.29
SSSCA1-201ENST00000309328 CSTL1Q9H114 145 aa13.21□□□□□ -0.29
SSSCA1-201ENST00000309328 OTORQ9NRC9 128 aa13.21□□□□□ -0.29
SSSCA1-201ENST00000309328 KNCNA6PVL3 124 aa13.2□□□□□ -0.3
SSSCA1-201ENST00000309328 H3BTX0 84 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 343.4 ms