RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.99□□□□□ -0.33
CCDC8-201ENST00000307522 LINC01560Q8TB33 94 aa12.99□□□□□ -0.33
CCDC8-201ENST00000307522 CCL13Q99616 98 aa12.99□□□□□ -0.33
CCDC8-201ENST00000307522 RUSC1-AS1Q66K80 236 aa12.98□□□□□ -0.33
CCDC8-201ENST00000307522 SPAG8Q99932 426 aaPredicted RBP12.98□□□□□ -0.33
CCDC8-201ENST00000307522 CXXC4Q9H2H0 198 aa12.98□□□□□ -0.33
CCDC8-201ENST00000307522 SS18L2Q9UHA2 77 aa12.98□□□□□ -0.33
CCDC8-201ENST00000307522 MBD3L4A6NDZ8 208 aaPredicted RBP12.98□□□□□ -0.33
CCDC8-201ENST00000307522 MBD3L3A6NE82 208 aaPredicted RBP12.98□□□□□ -0.33
CCDC8-201ENST00000307522 MBD3L5A6NJ08 208 aaPredicted RBP12.98□□□□□ -0.33
CCDC8-201ENST00000307522 SMKR1H3BMG3 65 aa12.98□□□□□ -0.33
CCDC8-201ENST00000307522 SMAD7O15105 426 aaKnown RBP12.98□□□□□ -0.33
CCDC8-201ENST00000307522 LY6HO94772 140 aa12.98□□□□□ -0.33
CCDC8-201ENST00000307522 COL8A1P27658 744 aa12.98□□□□□ -0.33
CCDC8-201ENST00000307522 APOBEC3AP31941 199 aaPredicted RBP12.98□□□□□ -0.33
CCDC8-201ENST00000307522 PRDX2P32119 198 aa12.98□□□□□ -0.33
CCDC8-201ENST00000307522 FAM216BQ8N7L0 139 aa12.98□□□□□ -0.33
CCDC8-201ENST00000307522 MBD3L2Q8NHZ7 208 aaPredicted RBP12.98□□□□□ -0.33
CCDC8-201ENST00000307522 NPIPB3Q92617 1050 aa12.98□□□□□ -0.33
CCDC8-201ENST00000307522 MRPL36Q9P0J6 103 aaKnown RBP12.98□□□□□ -0.33
CCDC8-201ENST00000307522 CD300EQ496F6 205 aaPredicted RBP12.98□□□□□ -0.33
CCDC8-201ENST00000307522 CCL17Q92583 94 aa12.98□□□□□ -0.33
CCDC8-201ENST00000307522 GEMIN7Q9H840 131 aaKnown RBP12.98□□□□□ -0.33
CCDC8-201ENST00000307522 hADV38S2A0JD32 116 aa12.97□□□□□ -0.33
CCDC8-201ENST00000307522 SRRM4A7MD48 611 aaKnown RBP12.97□□□□□ -0.33
CCDC8-201ENST00000307522 E7EUB6 86 aa12.97□□□□□ -0.33
CCDC8-201ENST00000307522 LY6DQ14210 128 aa12.97□□□□□ -0.33
CCDC8-201ENST00000307522 PATE2Q6UY27 113 aa12.97□□□□□ -0.33
CCDC8-201ENST00000307522 C20orf78Q9BR46 151 aa12.97□□□□□ -0.33
CCDC8-201ENST00000307522 IGKV1D-17A0A075B6S4 117 aa12.97□□□□□ -0.33
CCDC8-201ENST00000307522 FCER1GP30273 86 aa12.97□□□□□ -0.33
CCDC8-201ENST00000307522 C10orf113Q5VZT2 155 aa12.97□□□□□ -0.33
CCDC8-201ENST00000307522 RASL11AQ6T310 242 aa12.97□□□□□ -0.33
CCDC8-201ENST00000307522 PRNTQ86SH4 94 aa12.97□□□□□ -0.33
CCDC8-201ENST00000307522 GCSAMQ8N6F7 178 aa12.97□□□□□ -0.33
CCDC8-201ENST00000307522 C7orf69Q9H7B7 122 aa12.97□□□□□ -0.33
CCDC8-201ENST00000307522 IGKV2D-26A0A0A0MRZ7 120 aa12.96□□□□□ -0.33
CCDC8-201ENST00000307522 BSPH1Q075Z2 132 aa12.96□□□□□ -0.33
CCDC8-201ENST00000307522 LINC00305Q7Z4B0 112 aa12.96□□□□□ -0.33
CCDC8-201ENST00000307522 FAM169BQ8N8A8 192 aa12.96□□□□□ -0.33
CCDC8-201ENST00000307522 IFI27L2Q9H2X8 130 aa12.96□□□□□ -0.33
CCDC8-201ENST00000307522 KBTBD11-OT1A0A1B0GTJ5 212 aa12.96□□□□□ -0.33
CCDC8-201ENST00000307522 TEX50A0A1B0GTY4 177 aa12.96□□□□□ -0.33
CCDC8-201ENST00000307522 C15orf65H3BRN8 121 aa12.96□□□□□ -0.33
CCDC8-201ENST00000307522 SAA2P0DJI9 122 aaPredicted RBP12.96□□□□□ -0.33
CCDC8-201ENST00000307522 MC5RP33032 325 aa12.96□□□□□ -0.33
CCDC8-201ENST00000307522 REG1BP48304 166 aa12.96□□□□□ -0.33
CCDC8-201ENST00000307522 Q8IYB0 196 aa12.96□□□□□ -0.33
CCDC8-201ENST00000307522 IGFBPL1Q8WX77 278 aa12.96□□□□□ -0.33
CCDC8-201ENST00000307522 SMIM13P0DJ93 91 aa12.96□□□□□ -0.34
CCDC8-201ENST00000307522 OR5A1Q8NGJ0 315 aa12.96□□□□□ -0.34
CCDC8-201ENST00000307522 CDSNQ15517 529 aa12.95□□□□□ -0.34
CCDC8-201ENST00000307522 ANXA2RQ3ZCQ2 193 aa12.95□□□□□ -0.34
CCDC8-201ENST00000307522 PDPNQ86YL7 162 aa12.95□□□□□ -0.34
CCDC8-201ENST00000307522 FAM57AQ8TBR7 257 aa12.95□□□□□ -0.34
CCDC8-201ENST00000307522 SRSF12Q8WXF0 261 aaKnown RBP12.95□□□□□ -0.34
CCDC8-201ENST00000307522 RBPMS2Q6ZRY4 209 aaKnown RBP12.95□□□□□ -0.34
CCDC8-201ENST00000307522 FAM231DQ6ZW35 169 aa12.95□□□□□ -0.34
CCDC8-201ENST00000307522 EPDR1Q9UM22 224 aa12.95□□□□□ -0.34
CCDC8-201ENST00000307522 CD40P25942 277 aa12.94□□□□□ -0.34
CCDC8-201ENST00000307522 TNFAIP6P98066 277 aaPredicted RBP12.94□□□□□ -0.34
CCDC8-201ENST00000307522 BOD1L2Q8IYS8 172 aa12.94□□□□□ -0.34
CCDC8-201ENST00000307522 SMPXQ9UHP9 88 aa12.94□□□□□ -0.34
CCDC8-201ENST00000307522 ZFHX3Q15911 3703 aa12.94□□□□□ -0.34
CCDC8-201ENST00000307522 A0A096LNJ9 63 aa12.94□□□□□ -0.34
CCDC8-201ENST00000307522 FXYD5Q96DB9 178 aa12.94□□□□□ -0.34
CCDC8-201ENST00000307522 CR1LQ2VPA4 569 aa12.94□□□□□ -0.34
CCDC8-201ENST00000307522 IGFL3Q6UXB1 125 aa12.94□□□□□ -0.34
CCDC8-201ENST00000307522 EXOC3-AS1Q8N2X6 119 aa12.94□□□□□ -0.34
CCDC8-201ENST00000307522 SPANXB1Q9NS25 103 aaPredicted RBP12.94□□□□□ -0.34
CCDC8-201ENST00000307522 SLC25A17O43808 307 aa12.93□□□□□ -0.34
CCDC8-201ENST00000307522 IGLV1-44P01699 117 aa12.93□□□□□ -0.34
CCDC8-201ENST00000307522 CSN1S1P47710 185 aa12.93□□□□□ -0.34
CCDC8-201ENST00000307522 GPR82Q96P67 336 aa12.93□□□□□ -0.34
CCDC8-201ENST00000307522 TMEM14BQ9NUH8 114 aa12.93□□□□□ -0.34
CCDC8-201ENST00000307522 LRRK2Q5S007 2527 aa12.93□□□□□ -0.34
CCDC8-201ENST00000307522 C16orf97H3BN30 126 aa12.93□□□□□ -0.34
CCDC8-201ENST00000307522 ATP5L2Q7Z4Y8 100 aa12.93□□□□□ -0.34
CCDC8-201ENST00000307522 VGLL1Q99990 258 aa12.93□□□□□ -0.34
CCDC8-201ENST00000307522 D6R8Y8 96 aa12.92□□□□□ -0.34
CCDC8-201ENST00000307522 CT45A1Q5HYN5 189 aa12.92□□□□□ -0.34
CCDC8-201ENST00000307522 CT45A3Q8NHU0 189 aa12.92□□□□□ -0.34
CCDC8-201ENST00000307522 FAM90A1Q86YD7 464 aa12.92□□□□□ -0.34
CCDC8-201ENST00000307522 CELSR2Q9HCU4 2923 aa12.92□□□□□ -0.34
CCDC8-201ENST00000307522 TMEM213A2RRL7 107 aa12.92□□□□□ -0.34
CCDC8-201ENST00000307522 FAM162BQ5T6X4 162 aa12.92□□□□□ -0.34
CCDC8-201ENST00000307522 GOLT1AQ6ZVE7 132 aa12.92□□□□□ -0.34
CCDC8-201ENST00000307522 GLMPQ8WWB7 406 aa12.92□□□□□ -0.34
CCDC8-201ENST00000307522 IGHV1-46P01743 117 aa12.91□□□□□ -0.34
CCDC8-201ENST00000307522 GTSCR1Q86UQ5 136 aa12.91□□□□□ -0.34
CCDC8-201ENST00000307522 AMN1Q8IY45 258 aa12.91□□□□□ -0.34
CCDC8-201ENST00000307522 ZNF414Q96IQ9 312 aa12.91□□□□□ -0.34
CCDC8-201ENST00000307522 HCP5Q6MZN7 132 aa12.9□□□□□ -0.34
CCDC8-201ENST00000307522 USP9YO00507 2555 aaPredicted RBP12.9□□□□□ -0.34
CCDC8-201ENST00000307522 USP9XQ93008 2570 aaPredicted RBP12.9□□□□□ -0.34
CCDC8-201ENST00000307522 SMIM17P0DL12 118 aa12.9□□□□□ -0.34
CCDC8-201ENST00000307522 MBNL2Q5VZF2 373 aaKnown RBP12.9□□□□□ -0.34
CCDC8-201ENST00000307522 SIGLEC8Q9NYZ4 499 aa12.9□□□□□ -0.34
CCDC8-201ENST00000307522 THBDP07204 575 aa12.9□□□□□ -0.34
CCDC8-201ENST00000307522 RNASE2P10153 161 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms