RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 APRG1Q8IVJ8 170 aa18.2■□□□□ 0.5
HOXC9-201ENST00000303450 RPP25LQ8N5L8 163 aaKnown RBP18.2■□□□□ 0.5
HOXC9-201ENST00000303450 STOML3Q8TAV4 291 aa18.2■□□□□ 0.5
HOXC9-201ENST00000303450 LINC00052Q96N35 136 aa18.2■□□□□ 0.5
HOXC9-201ENST00000303450 OR51M1Q9H341 326 aa18.2■□□□□ 0.5
HOXC9-201ENST00000303450 RPRMQ9NS64 109 aa18.2■□□□□ 0.5
HOXC9-201ENST00000303450 H3BQ15 152 aa18.19■□□□□ 0.5
HOXC9-201ENST00000303450 SEC11BP0C7V7 166 aa18.19■□□□□ 0.5
HOXC9-201ENST00000303450 LCN15Q6UWW0 184 aa18.19■□□□□ 0.5
HOXC9-201ENST00000303450 SLC51BQ86UW2 128 aa18.19■□□□□ 0.5
HOXC9-201ENST00000303450 PAXXQ9BUH6 204 aa18.19■□□□□ 0.5
HOXC9-201ENST00000303450 SRD5A3Q9H8P0 318 aa18.19■□□□□ 0.5
HOXC9-201ENST00000303450 EIF3GO75821 320 aaKnown RBP eCLIP18.18■□□□□ 0.5
HOXC9-201ENST00000303450 HIST1H1EP10412 219 aaKnown RBP18.18■□□□□ 0.5
HOXC9-201ENST00000303450 GUK1Q16774 197 aa18.18■□□□□ 0.5
HOXC9-201ENST00000303450 ACTR3CQ9C0K3 210 aaPredicted RBP18.18■□□□□ 0.5
HOXC9-201ENST00000303450 H3BTX0 84 aa18.18■□□□□ 0.5
HOXC9-201ENST00000303450 ZNF586Q9NXT0 402 aa18.18■□□□□ 0.5
HOXC9-201ENST00000303450 HMGB3O15347 200 aaKnown RBP18.17■□□□□ 0.5
HOXC9-201ENST00000303450 ZNF124Q15973 351 aa18.17■□□□□ 0.5
HOXC9-201ENST00000303450 RAB24Q969Q5 203 aa18.17■□□□□ 0.5
HOXC9-201ENST00000303450 A8MZ25 164 aa18.16■□□□□ 0.5
HOXC9-201ENST00000303450 OR10J4P0C629 311 aa18.16■□□□□ 0.5
HOXC9-201ENST00000303450 IGFL4Q6B9Z1 124 aa18.16■□□□□ 0.5
HOXC9-201ENST00000303450 BLNKQ8WV28 456 aa18.16■□□□□ 0.5
HOXC9-201ENST00000303450 RNF141Q8WVD5 230 aa18.16■□□□□ 0.5
HOXC9-201ENST00000303450 CITED4Q96RK1 184 aa18.16■□□□□ 0.5
HOXC9-201ENST00000303450 SLC50A1Q9BRV3 221 aa18.16■□□□□ 0.5
HOXC9-201ENST00000303450 TRAV8-2A0A0B4J237 113 aa18.15■□□□□ 0.5
HOXC9-201ENST00000303450 EIF5AL1Q6IS14 154 aaKnown RBP18.15■□□□□ 0.5
HOXC9-201ENST00000303450 PQLC2Q6ZP29 291 aa18.15■□□□□ 0.5
HOXC9-201ENST00000303450 TMED6Q8WW62 240 aa18.15■□□□□ 0.5
HOXC9-201ENST00000303450 TRBV19A0A075B6N1 114 aa18.14■□□□□ 0.49
HOXC9-201ENST00000303450 NBEAP1P0C6P0 100 aa18.14■□□□□ 0.49
HOXC9-201ENST00000303450 FRMD6-AS1P0C7T7 363 aa18.14■□□□□ 0.49
HOXC9-201ENST00000303450 UBE2L3P68036 154 aaKnown RBP18.14■□□□□ 0.49
HOXC9-201ENST00000303450 RNF182Q8N6D2 247 aa18.14■□□□□ 0.49
HOXC9-201ENST00000303450 FXYD5Q96DB9 178 aa18.14■□□□□ 0.49
HOXC9-201ENST00000303450 SAT2Q96F10 170 aaPredicted RBP18.14■□□□□ 0.49
HOXC9-201ENST00000303450 ZNF503Q96F45 646 aa18.14■□□□□ 0.49
HOXC9-201ENST00000303450 ZNF331Q9NQX6 463 aaPredicted RBP18.14■□□□□ 0.49
HOXC9-201ENST00000303450 UMAD1C9J7I0 102 aa18.13■□□□□ 0.49
HOXC9-201ENST00000303450 SLC17A3O00476 420 aa18.13■□□□□ 0.49
HOXC9-201ENST00000303450 STAG3L2P0CL84 134 aa18.13■□□□□ 0.49
HOXC9-201ENST00000303450 STAG3L3P0CL85 134 aa18.13■□□□□ 0.49
HOXC9-201ENST00000303450 PDE6HQ13956 83 aa18.13■□□□□ 0.49
HOXC9-201ENST00000303450 C20orf173Q96LM9 149 aa18.13■□□□□ 0.49
HOXC9-201ENST00000303450 CTXND1A0A1B0GTU2 59 aa18.13■□□□□ 0.49
HOXC9-201ENST00000303450 ZNF253O75346 499 aa18.12■□□□□ 0.49
HOXC9-201ENST00000303450 ARL14EPLP0DKL9 152 aa18.12■□□□□ 0.49
HOXC9-201ENST00000303450 PLA2G2EQ9NZK7 142 aa18.12■□□□□ 0.49
HOXC9-201ENST00000303450 KNCNA6PVL3 124 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 HLA-DMBP28068 263 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 PSG9Q00887 426 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 ZNF726P1Q15940 193 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 ACTL10Q5JWF8 245 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 SSX7Q7RTT5 188 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 STHQ8IWL8 128 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 CLEC5AQ9NY25 188 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 BOLA1Q9Y3E2 137 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 RBMY1BA6NDE4 496 aaKnown RBP18.1■□□□□ 0.49
HOXC9-201ENST00000303450 RBMY1EA6NEQ0 496 aaKnown RBP18.1■□□□□ 0.49
HOXC9-201ENST00000303450 NDUFB4O95168 129 aa18.1■□□□□ 0.49
HOXC9-201ENST00000303450 CXorf1O96002 111 aa18.1■□□□□ 0.49
HOXC9-201ENST00000303450 RBMY1DP0C7P1 496 aaKnown RBP18.1■□□□□ 0.49
HOXC9-201ENST00000303450 PSG3Q16557 428 aa18.1■□□□□ 0.49
HOXC9-201ENST00000303450 ZNF738Q8NE65 137 aa18.1■□□□□ 0.49
HOXC9-201ENST00000303450 AGRNO00468 2067 aa18.09■□□□□ 0.49
HOXC9-201ENST00000303450 LOC102724200A0A096LPH7 203 aaPredicted RBP18.09■□□□□ 0.49
HOXC9-201ENST00000303450 BOLA2-SMG1P6H3BVE0 249 aa18.09■□□□□ 0.49
HOXC9-201ENST00000303450 FHITP49789 147 aa18.09■□□□□ 0.49
HOXC9-201ENST00000303450 FAM213BQ8TBF2 198 aa18.09■□□□□ 0.49
HOXC9-201ENST00000303450 RPL35AP18077 110 aaKnown RBP18.08■□□□□ 0.49
HOXC9-201ENST00000303450 DEFB1P60022 68 aa18.08■□□□□ 0.49
HOXC9-201ENST00000303450 EBLN2Q6P2I7 272 aa18.08■□□□□ 0.49
HOXC9-201ENST00000303450 DPPA3Q6W0C5 159 aa18.08■□□□□ 0.49
HOXC9-201ENST00000303450 FOXI2Q6ZQN5 318 aa18.08■□□□□ 0.49
HOXC9-201ENST00000303450 AAMDCQ9H7C9 122 aa18.08■□□□□ 0.49
HOXC9-201ENST00000303450 LINC00322Q6ZN03 302 aaPredicted RBP18.08■□□□□ 0.48
HOXC9-201ENST00000303450 IQCF2Q8IXL9 164 aa18.08■□□□□ 0.48
HOXC9-201ENST00000303450 PHYHIPLQ96FC7 376 aa18.08■□□□□ 0.48
HOXC9-201ENST00000303450 SAV1Q9H4B6 383 aaPredicted RBP18.08■□□□□ 0.48
HOXC9-201ENST00000303450 GCHFRP30047 84 aa18.07■□□□□ 0.48
HOXC9-201ENST00000303450 RANP62826 216 aaKnown RBP18.07■□□□□ 0.48
HOXC9-201ENST00000303450 EXOC3-AS1Q8N2X6 119 aa18.07■□□□□ 0.48
HOXC9-201ENST00000303450 MAP1LC3B2A6NCE7 125 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 F6UB75 175 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 HLA-DRB4P13762 266 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 RAB5CP51148 216 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 GDF5OSQ5U4N7 250 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 RPUSD4Q96CM3 377 aaKnown RBP18.06■□□□□ 0.48
HOXC9-201ENST00000303450 B9D2Q9BPU9 175 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 MAP1LC3BQ9GZQ8 125 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 HLA-DRB4X5D2U9 266 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 PRKDCP78527 4128 aaKnown RBP18.06■□□□□ 0.48
HOXC9-201ENST00000303450 ZNF705FA8MVS1 300 aaPredicted RBP18.05■□□□□ 0.48
HOXC9-201ENST00000303450 H3BMM0 161 aa18.05■□□□□ 0.48
HOXC9-201ENST00000303450 FGF8P55075 233 aaPredicted RBP18.05■□□□□ 0.48
HOXC9-201ENST00000303450 ICAM4Q14773 271 aa18.05■□□□□ 0.48
HOXC9-201ENST00000303450 TMEM167BQ9NRX6 74 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms