RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 APRG1Q8IVJ8 170 aa18.2■□□□□ 0.5
HOXC9-201ENST00000303450 RPP25LQ8N5L8 163 aaKnown RBP18.2■□□□□ 0.5
HOXC9-201ENST00000303450 STOML3Q8TAV4 291 aa18.2■□□□□ 0.5
HOXC9-201ENST00000303450 LINC00052Q96N35 136 aa18.2■□□□□ 0.5
HOXC9-201ENST00000303450 OR51M1Q9H341 326 aa18.2■□□□□ 0.5
HOXC9-201ENST00000303450 RPRMQ9NS64 109 aa18.2■□□□□ 0.5
HOXC9-201ENST00000303450 H3BQ15 152 aa18.19■□□□□ 0.5
HOXC9-201ENST00000303450 SEC11BP0C7V7 166 aa18.19■□□□□ 0.5
HOXC9-201ENST00000303450 LCN15Q6UWW0 184 aa18.19■□□□□ 0.5
HOXC9-201ENST00000303450 SLC51BQ86UW2 128 aa18.19■□□□□ 0.5
HOXC9-201ENST00000303450 PAXXQ9BUH6 204 aa18.19■□□□□ 0.5
HOXC9-201ENST00000303450 SRD5A3Q9H8P0 318 aa18.19■□□□□ 0.5
HOXC9-201ENST00000303450 EIF3GO75821 320 aaKnown RBP eCLIP18.18■□□□□ 0.5
HOXC9-201ENST00000303450 HIST1H1EP10412 219 aaKnown RBP18.18■□□□□ 0.5
HOXC9-201ENST00000303450 GUK1Q16774 197 aa18.18■□□□□ 0.5
HOXC9-201ENST00000303450 ACTR3CQ9C0K3 210 aaPredicted RBP18.18■□□□□ 0.5
HOXC9-201ENST00000303450 H3BTX0 84 aa18.18■□□□□ 0.5
HOXC9-201ENST00000303450 ZNF586Q9NXT0 402 aa18.18■□□□□ 0.5
HOXC9-201ENST00000303450 HMGB3O15347 200 aaKnown RBP18.17■□□□□ 0.5
HOXC9-201ENST00000303450 ZNF124Q15973 351 aa18.17■□□□□ 0.5
HOXC9-201ENST00000303450 RAB24Q969Q5 203 aa18.17■□□□□ 0.5
HOXC9-201ENST00000303450 A8MZ25 164 aa18.16■□□□□ 0.5
HOXC9-201ENST00000303450 OR10J4P0C629 311 aa18.16■□□□□ 0.5
HOXC9-201ENST00000303450 IGFL4Q6B9Z1 124 aa18.16■□□□□ 0.5
HOXC9-201ENST00000303450 BLNKQ8WV28 456 aa18.16■□□□□ 0.5
HOXC9-201ENST00000303450 RNF141Q8WVD5 230 aa18.16■□□□□ 0.5
HOXC9-201ENST00000303450 CITED4Q96RK1 184 aa18.16■□□□□ 0.5
HOXC9-201ENST00000303450 SLC50A1Q9BRV3 221 aa18.16■□□□□ 0.5
HOXC9-201ENST00000303450 TRAV8-2A0A0B4J237 113 aa18.15■□□□□ 0.5
HOXC9-201ENST00000303450 EIF5AL1Q6IS14 154 aaKnown RBP18.15■□□□□ 0.5
HOXC9-201ENST00000303450 PQLC2Q6ZP29 291 aa18.15■□□□□ 0.5
HOXC9-201ENST00000303450 TMED6Q8WW62 240 aa18.15■□□□□ 0.5
HOXC9-201ENST00000303450 TRBV19A0A075B6N1 114 aa18.14■□□□□ 0.49
HOXC9-201ENST00000303450 NBEAP1P0C6P0 100 aa18.14■□□□□ 0.49
HOXC9-201ENST00000303450 FRMD6-AS1P0C7T7 363 aa18.14■□□□□ 0.49
HOXC9-201ENST00000303450 UBE2L3P68036 154 aaKnown RBP18.14■□□□□ 0.49
HOXC9-201ENST00000303450 RNF182Q8N6D2 247 aa18.14■□□□□ 0.49
HOXC9-201ENST00000303450 FXYD5Q96DB9 178 aa18.14■□□□□ 0.49
HOXC9-201ENST00000303450 SAT2Q96F10 170 aaPredicted RBP18.14■□□□□ 0.49
HOXC9-201ENST00000303450 ZNF503Q96F45 646 aa18.14■□□□□ 0.49
HOXC9-201ENST00000303450 ZNF331Q9NQX6 463 aaPredicted RBP18.14■□□□□ 0.49
HOXC9-201ENST00000303450 UMAD1C9J7I0 102 aa18.13■□□□□ 0.49
HOXC9-201ENST00000303450 SLC17A3O00476 420 aa18.13■□□□□ 0.49
HOXC9-201ENST00000303450 STAG3L2P0CL84 134 aa18.13■□□□□ 0.49
HOXC9-201ENST00000303450 STAG3L3P0CL85 134 aa18.13■□□□□ 0.49
HOXC9-201ENST00000303450 PDE6HQ13956 83 aa18.13■□□□□ 0.49
HOXC9-201ENST00000303450 C20orf173Q96LM9 149 aa18.13■□□□□ 0.49
HOXC9-201ENST00000303450 CTXND1A0A1B0GTU2 59 aa18.13■□□□□ 0.49
HOXC9-201ENST00000303450 ZNF253O75346 499 aa18.12■□□□□ 0.49
HOXC9-201ENST00000303450 ARL14EPLP0DKL9 152 aa18.12■□□□□ 0.49
HOXC9-201ENST00000303450 PLA2G2EQ9NZK7 142 aa18.12■□□□□ 0.49
HOXC9-201ENST00000303450 KNCNA6PVL3 124 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 HLA-DMBP28068 263 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 PSG9Q00887 426 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 ZNF726P1Q15940 193 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 ACTL10Q5JWF8 245 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 SSX7Q7RTT5 188 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 STHQ8IWL8 128 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 CLEC5AQ9NY25 188 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 BOLA1Q9Y3E2 137 aa18.11■□□□□ 0.49
HOXC9-201ENST00000303450 RBMY1BA6NDE4 496 aaKnown RBP18.1■□□□□ 0.49
HOXC9-201ENST00000303450 RBMY1EA6NEQ0 496 aaKnown RBP18.1■□□□□ 0.49
HOXC9-201ENST00000303450 NDUFB4O95168 129 aa18.1■□□□□ 0.49
HOXC9-201ENST00000303450 CXorf1O96002 111 aa18.1■□□□□ 0.49
HOXC9-201ENST00000303450 RBMY1DP0C7P1 496 aaKnown RBP18.1■□□□□ 0.49
HOXC9-201ENST00000303450 PSG3Q16557 428 aa18.1■□□□□ 0.49
HOXC9-201ENST00000303450 ZNF738Q8NE65 137 aa18.1■□□□□ 0.49
HOXC9-201ENST00000303450 AGRNO00468 2067 aa18.09■□□□□ 0.49
HOXC9-201ENST00000303450 LOC102724200A0A096LPH7 203 aaPredicted RBP18.09■□□□□ 0.49
HOXC9-201ENST00000303450 BOLA2-SMG1P6H3BVE0 249 aa18.09■□□□□ 0.49
HOXC9-201ENST00000303450 FHITP49789 147 aa18.09■□□□□ 0.49
HOXC9-201ENST00000303450 FAM213BQ8TBF2 198 aa18.09■□□□□ 0.49
HOXC9-201ENST00000303450 RPL35AP18077 110 aaKnown RBP18.08■□□□□ 0.49
HOXC9-201ENST00000303450 DEFB1P60022 68 aa18.08■□□□□ 0.49
HOXC9-201ENST00000303450 EBLN2Q6P2I7 272 aa18.08■□□□□ 0.49
HOXC9-201ENST00000303450 DPPA3Q6W0C5 159 aa18.08■□□□□ 0.49
HOXC9-201ENST00000303450 FOXI2Q6ZQN5 318 aa18.08■□□□□ 0.49
HOXC9-201ENST00000303450 AAMDCQ9H7C9 122 aa18.08■□□□□ 0.49
HOXC9-201ENST00000303450 LINC00322Q6ZN03 302 aaPredicted RBP18.08■□□□□ 0.48
HOXC9-201ENST00000303450 IQCF2Q8IXL9 164 aa18.08■□□□□ 0.48
HOXC9-201ENST00000303450 PHYHIPLQ96FC7 376 aa18.08■□□□□ 0.48
HOXC9-201ENST00000303450 SAV1Q9H4B6 383 aaPredicted RBP18.08■□□□□ 0.48
HOXC9-201ENST00000303450 GCHFRP30047 84 aa18.07■□□□□ 0.48
HOXC9-201ENST00000303450 RANP62826 216 aaKnown RBP18.07■□□□□ 0.48
HOXC9-201ENST00000303450 EXOC3-AS1Q8N2X6 119 aa18.07■□□□□ 0.48
HOXC9-201ENST00000303450 MAP1LC3B2A6NCE7 125 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 F6UB75 175 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 HLA-DRB4P13762 266 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 RAB5CP51148 216 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 GDF5OSQ5U4N7 250 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 RPUSD4Q96CM3 377 aaKnown RBP18.06■□□□□ 0.48
HOXC9-201ENST00000303450 B9D2Q9BPU9 175 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 MAP1LC3BQ9GZQ8 125 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 HLA-DRB4X5D2U9 266 aa18.06■□□□□ 0.48
HOXC9-201ENST00000303450 PRKDCP78527 4128 aaKnown RBP18.06■□□□□ 0.48
HOXC9-201ENST00000303450 ZNF705FA8MVS1 300 aaPredicted RBP18.05■□□□□ 0.48
HOXC9-201ENST00000303450 H3BMM0 161 aa18.05■□□□□ 0.48
HOXC9-201ENST00000303450 FGF8P55075 233 aaPredicted RBP18.05■□□□□ 0.48
HOXC9-201ENST00000303450 ICAM4Q14773 271 aa18.05■□□□□ 0.48
HOXC9-201ENST00000303450 TMEM167BQ9NRX6 74 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 260.6 ms