RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 TMEM238C9JI98 176 aa12.34□□□□□ -0.43
DDB1-201ENST00000301764 DEFB104AQ8WTQ1 72 aa12.34□□□□□ -0.43
DDB1-201ENST00000301764 ZNF492Q9P255 531 aa12.34□□□□□ -0.43
DDB1-201ENST00000301764 TTC28Q96AY4 2481 aa12.33□□□□□ -0.44
DDB1-201ENST00000301764 ZNF56Q15929 161 aa12.33□□□□□ -0.44
DDB1-201ENST00000301764 GAFA1Q96PS6 74 aa12.33□□□□□ -0.44
DDB1-201ENST00000301764 CHTOPQ9Y3Y2 248 aaKnown RBP12.33□□□□□ -0.44
DDB1-201ENST00000301764 A8MWV9 139 aa12.33□□□□□ -0.44
DDB1-201ENST00000301764 PF4V1P10720 104 aa12.33□□□□□ -0.44
DDB1-201ENST00000301764 TIMM23O14925 209 aa12.33□□□□□ -0.44
DDB1-201ENST00000301764 NBR2O15453 112 aa12.33□□□□□ -0.44
DDB1-201ENST00000301764 TMPRSS3P57727 454 aa12.33□□□□□ -0.44
DDB1-201ENST00000301764 NDUFA4L2Q9NRX3 87 aa12.33□□□□□ -0.44
DDB1-201ENST00000301764 SRRM4A7MD48 611 aaKnown RBP12.32□□□□□ -0.44
DDB1-201ENST00000301764 IGLV2-14P01704 120 aa12.32□□□□□ -0.44
DDB1-201ENST00000301764 ASIPP42127 132 aa12.32□□□□□ -0.44
DDB1-201ENST00000301764 WT1-ASQ06250 92 aa12.32□□□□□ -0.44
DDB1-201ENST00000301764 OBSL1O75147 1896 aa12.32□□□□□ -0.44
DDB1-201ENST00000301764 NUP210Q8TEM1 1887 aaPredicted RBP12.32□□□□□ -0.44
DDB1-201ENST00000301764 IGKV3-20P01619 116 aa12.32□□□□□ -0.44
DDB1-201ENST00000301764 TRAV40A0A0B4J280 105 aa12.32□□□□□ -0.44
DDB1-201ENST00000301764 A0A1W2PPM0 123 aa12.32□□□□□ -0.44
DDB1-201ENST00000301764 CLEC19AQ6UXS0 136 aa12.32□□□□□ -0.44
DDB1-201ENST00000301764 PGPEP1Q9NXJ5 209 aa12.32□□□□□ -0.44
DDB1-201ENST00000301764 SP9P0CG40 484 aa12.31□□□□□ -0.44
DDB1-201ENST00000301764 LAGE3Q14657 143 aa12.31□□□□□ -0.44
DDB1-201ENST00000301764 FAM159AQ6UWV7 190 aa12.31□□□□□ -0.44
DDB1-201ENST00000301764 SLC25A15Q9Y619 301 aa12.31□□□□□ -0.44
DDB1-201ENST00000301764 EML6Q6ZMW3 1958 aa12.31□□□□□ -0.44
DDB1-201ENST00000301764 FXYD5Q96DB9 178 aa12.31□□□□□ -0.44
DDB1-201ENST00000301764 CSTL1Q9H114 145 aa12.31□□□□□ -0.44
DDB1-201ENST00000301764 SPINK8P0C7L1 97 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 FAM104BQ5XKR9 115 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 K7ERJ3 54 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 TAX1BP3O14907 124 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 PRTN3P24158 256 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 SSBP2P81877 361 aaPredicted RBP12.3□□□□□ -0.44
DDB1-201ENST00000301764 RHOGP84095 191 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 KLF5Q13887 457 aaPredicted RBP12.3□□□□□ -0.44
DDB1-201ENST00000301764 MORN5Q5VZ52 161 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 PLSCR4Q9NRQ2 329 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 ADIPOQQ15848 244 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 C17orf58Q2M2W7 97 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 WIPF2Q8TF74 440 aaPredicted RBP12.3□□□□□ -0.44
DDB1-201ENST00000301764 ZNF747Q9BV97 191 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 SIGLEC8Q9NYZ4 499 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 SIGLEC9Q9Y336 463 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 DKK1O94907 266 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 AZU1P20160 251 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 ID1P41134 155 aa12.3□□□□□ -0.44
DDB1-201ENST00000301764 PCNX2A6NKB5 2137 aa12.29□□□□□ -0.44
DDB1-201ENST00000301764 AMTNQ6UX39 209 aa12.29□□□□□ -0.44
DDB1-201ENST00000301764 IGHV1-8P0DP01 117 aa12.29□□□□□ -0.44
DDB1-201ENST00000301764 MDS2Q8NDY4 140 aa12.29□□□□□ -0.44
DDB1-201ENST00000301764 KIAA1549LQ6ZVL6 1849 aa12.29□□□□□ -0.44
DDB1-201ENST00000301764 TMEM8BA6NDV4 472 aa12.29□□□□□ -0.44
DDB1-201ENST00000301764 IGHV4-39P01824 125 aa12.29□□□□□ -0.44
DDB1-201ENST00000301764 FOXC1Q12948 553 aa12.29□□□□□ -0.44
DDB1-201ENST00000301764 ORMDL2Q53FV1 153 aa12.29□□□□□ -0.44
DDB1-201ENST00000301764 GLMPQ8WWB7 406 aa12.29□□□□□ -0.44
DDB1-201ENST00000301764 DLX4Q92988 240 aaPredicted RBP12.29□□□□□ -0.44
DDB1-201ENST00000301764 VCX2Q9H322 139 aa12.29□□□□□ -0.44
DDB1-201ENST00000301764 EEF1AKMT3Q96AZ1 226 aa12.29□□□□□ -0.44
DDB1-201ENST00000301764 B9A039 149 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 HAX1O00165 279 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 CRXO43186 299 aaPredicted RBP12.28□□□□□ -0.44
DDB1-201ENST00000301764 ATP5G2Q06055 141 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 LGALS9BQ3B8N2 356 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 LGALS9CQ6DKI2 356 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 PCP2Q8IVA1 136 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 LINC01560Q8TB33 94 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 UTRNP46939 3433 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 H3BMG7 143 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 C8orf49Q96NF6 230 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 NCOR1P1Q9H4R4 102 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 LY6G6EA0A0G2JKS1 128 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 TNFRSF6BO95407 300 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 TSPAN13O95857 204 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 SYT8Q8NBV8 401 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 U3KQA8 63 aa12.28□□□□□ -0.44
DDB1-201ENST00000301764 TRAV2A0A0B4J234 112 aa12.27□□□□□ -0.44
DDB1-201ENST00000301764 IGHV1-3A0A0C4DH29 117 aa12.27□□□□□ -0.44
DDB1-201ENST00000301764 TMEM262E9PQX1 116 aa12.27□□□□□ -0.44
DDB1-201ENST00000301764 APOBEC3AP31941 199 aaPredicted RBP12.27□□□□□ -0.44
DDB1-201ENST00000301764 GAGE2BQ13066 116 aa12.27□□□□□ -0.44
DDB1-201ENST00000301764 KRTAP27-1Q3LI81 207 aa12.27□□□□□ -0.44
DDB1-201ENST00000301764 GAGE2EQ4V326 116 aa12.27□□□□□ -0.44
DDB1-201ENST00000301764 GAGE2DQ9UEU5 116 aa12.27□□□□□ -0.44
DDB1-201ENST00000301764 TP73-AS1Q9UF72 201 aa12.27□□□□□ -0.44
DDB1-201ENST00000301764 PPP1R17O96001 155 aa12.27□□□□□ -0.45
DDB1-201ENST00000301764 MRPL51Q4U2R6 128 aaKnown RBP12.27□□□□□ -0.45
DDB1-201ENST00000301764 ANKRD39Q53RE8 183 aa12.27□□□□□ -0.45
DDB1-201ENST00000301764 DYSFO75923 2080 aa12.27□□□□□ -0.45
DDB1-201ENST00000301764 GAGE12HA6NDE8 117 aa12.27□□□□□ -0.45
DDB1-201ENST00000301764 TPSG1Q9NRR2 321 aa12.27□□□□□ -0.45
DDB1-201ENST00000301764 DKK2Q9UBU2 259 aa12.27□□□□□ -0.45
DDB1-201ENST00000301764 TP53TG3Q9ULZ0 132 aa12.27□□□□□ -0.45
DDB1-201ENST00000301764 ADAMTS9Q9P2N4 1935 aa12.27□□□□□ -0.45
DDB1-201ENST00000301764 ZFAND6Q6FIF0 208 aa12.27□□□□□ -0.45
DDB1-201ENST00000301764 CCL21O00585 134 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms