RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 FCGR2BP31994 310 aaPredicted RBP11.66□□□□□ -0.54
COL6A2-201ENST00000300527 IGFL4Q6B9Z1 124 aa11.66□□□□□ -0.54
COL6A2-201ENST00000300527 FBXL15Q9H469 300 aa11.66□□□□□ -0.54
COL6A2-201ENST00000300527 K7EQM0 130 aa11.66□□□□□ -0.54
COL6A2-201ENST00000300527 EVI2AP22794 236 aa11.66□□□□□ -0.54
COL6A2-201ENST00000300527 COX7A1P24310 79 aa11.66□□□□□ -0.54
COL6A2-201ENST00000300527 C22orf34Q6ZV56 151 aa11.66□□□□□ -0.54
COL6A2-201ENST00000300527 NPFFR1Q9GZQ6 430 aa11.66□□□□□ -0.54
COL6A2-201ENST00000300527 C1orf210Q8IVY1 113 aa11.65□□□□□ -0.54
COL6A2-201ENST00000300527 PLSCR4Q9NRQ2 329 aa11.65□□□□□ -0.54
COL6A2-201ENST00000300527 INSIG2Q9Y5U4 225 aa11.65□□□□□ -0.54
COL6A2-201ENST00000300527 TACC2O95359 2948 aa11.65□□□□□ -0.54
COL6A2-201ENST00000300527 TMEM189A5PLL7 270 aa11.65□□□□□ -0.54
COL6A2-201ENST00000300527 PPIFP30405 207 aaKnown RBP11.65□□□□□ -0.54
COL6A2-201ENST00000300527 PSG3Q16557 428 aa11.65□□□□□ -0.54
COL6A2-201ENST00000300527 ZNF474Q6S9Z5 364 aaPredicted RBP11.65□□□□□ -0.54
COL6A2-201ENST00000300527 PIP4P2Q8N4L2 257 aa11.65□□□□□ -0.54
COL6A2-201ENST00000300527 MALRD1Q5VYJ5 2156 aa11.65□□□□□ -0.54
COL6A2-201ENST00000300527 A0A096LNJ9 63 aa11.65□□□□□ -0.55
COL6A2-201ENST00000300527 SMIM13P0DJ93 91 aa11.65□□□□□ -0.55
COL6A2-201ENST00000300527 FXYD2P54710 66 aa11.65□□□□□ -0.55
COL6A2-201ENST00000300527 ORMDL3Q8N138 153 aa11.65□□□□□ -0.55
COL6A2-201ENST00000300527 TM4SF5O14894 197 aa11.64□□□□□ -0.55
COL6A2-201ENST00000300527 KLF17Q5JT82 389 aaPredicted RBP11.64□□□□□ -0.55
COL6A2-201ENST00000300527 GTSCR1Q86UQ5 136 aa11.64□□□□□ -0.55
COL6A2-201ENST00000300527 Q8TAT8 98 aa11.64□□□□□ -0.55
COL6A2-201ENST00000300527 TRGV9Q99603 122 aa11.64□□□□□ -0.55
COL6A2-201ENST00000300527 IGHV3-35A0A0C4DH35 117 aa11.64□□□□□ -0.55
COL6A2-201ENST00000300527 IGLV2-23P01705 113 aa11.64□□□□□ -0.55
COL6A2-201ENST00000300527 IGLV2-11P01706 119 aa11.64□□□□□ -0.55
COL6A2-201ENST00000300527 HBDP02042 147 aa11.64□□□□□ -0.55
COL6A2-201ENST00000300527 LCNL1Q6ZST4 164 aa11.64□□□□□ -0.55
COL6A2-201ENST00000300527 M0R296 226 aa11.63□□□□□ -0.55
COL6A2-201ENST00000300527 NDUFB3O43676 98 aa11.63□□□□□ -0.55
COL6A2-201ENST00000300527 NPYP01303 97 aa11.63□□□□□ -0.55
COL6A2-201ENST00000300527 IL4P05112 153 aa11.63□□□□□ -0.55
COL6A2-201ENST00000300527 BOD1L2Q8IYS8 172 aa11.63□□□□□ -0.55
COL6A2-201ENST00000300527 ADGRG4Q8IZF6 3080 aa11.63□□□□□ -0.55
COL6A2-201ENST00000300527 IGKV2-40A0A087WW87 121 aaPredicted RBP11.63□□□□□ -0.55
COL6A2-201ENST00000300527 IGKV2D-40P01614 121 aaPredicted RBP11.63□□□□□ -0.55
COL6A2-201ENST00000300527 CRIP1P50238 77 aa11.63□□□□□ -0.55
COL6A2-201ENST00000300527 AZU1P20160 251 aa11.63□□□□□ -0.55
COL6A2-201ENST00000300527 NGBQ9NPG2 151 aa11.63□□□□□ -0.55
COL6A2-201ENST00000300527 MGAQ8IWI9 3026 aa11.63□□□□□ -0.55
COL6A2-201ENST00000300527 ZNF785A8K8V0 405 aa11.62□□□□□ -0.55
COL6A2-201ENST00000300527 DEFB109BQ30KR1 87 aa11.62□□□□□ -0.55
COL6A2-201ENST00000300527 MRPL51Q4U2R6 128 aaKnown RBP11.62□□□□□ -0.55
COL6A2-201ENST00000300527 TMEM108Q6UXF1 575 aa11.62□□□□□ -0.55
COL6A2-201ENST00000300527 ADAMTSL5Q6ZMM2 481 aa11.62□□□□□ -0.55
COL6A2-201ENST00000300527 TMEM75Q8N9X5 138 aa11.62□□□□□ -0.55
COL6A2-201ENST00000300527 COL25A1Q9BXS0 654 aaPredicted RBP11.62□□□□□ -0.55
COL6A2-201ENST00000300527 IGHV3-23P01764 117 aa11.62□□□□□ -0.55
COL6A2-201ENST00000300527 AMTNQ6UX39 209 aa11.62□□□□□ -0.55
COL6A2-201ENST00000300527 WFDC12Q8WWY7 111 aa11.62□□□□□ -0.55
COL6A2-201ENST00000300527 TSSC4Q9Y5U2 329 aaPredicted RBP11.62□□□□□ -0.55
COL6A2-201ENST00000300527 PPIAL4EA0A075B759 164 aa11.62□□□□□ -0.55
COL6A2-201ENST00000300527 IGKV2D-26A0A0A0MRZ7 120 aa11.62□□□□□ -0.55
COL6A2-201ENST00000300527 CIDEAO60543 219 aa11.62□□□□□ -0.55
COL6A2-201ENST00000300527 PPIAL4FP0DN26 164 aa11.62□□□□□ -0.55
COL6A2-201ENST00000300527 APOBEC3AP31941 199 aaPredicted RBP11.62□□□□□ -0.55
COL6A2-201ENST00000300527 DKK4Q9UBT3 224 aa11.62□□□□□ -0.55
COL6A2-201ENST00000300527 NPIPB6E9PJ23 425 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 ORM1P02763 201 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 OR4X2Q8NGF9 303 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 OR9G4Q8NGQ1 327 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 SCNM1Q9BWG6 230 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 MSRB1Q9NZV6 116 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 NPIPB5A8MRT5 1133 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 NDUFS7O75251 213 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 SFTA2Q6UW10 78 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 TMEM160Q9NX00 188 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 DSCAML1Q8TD84 2053 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 PIEZO2Q9H5I5 2752 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 TECTAO75443 2155 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 GAS8-AS1O95177 125 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 IGHG3P01860 377 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 LEPP41159 167 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 RBPJQ06330 500 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 SH2D6Q7Z4S9 175 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 FOXC2Q99958 501 aa11.61□□□□□ -0.55
COL6A2-201ENST00000300527 TRAV17A0A0B4J275 112 aa11.6□□□□□ -0.55
COL6A2-201ENST00000300527 LGALS9BQ3B8N2 356 aa11.6□□□□□ -0.55
COL6A2-201ENST00000300527 FAM104BQ5XKR9 115 aa11.6□□□□□ -0.55
COL6A2-201ENST00000300527 LGALS9CQ6DKI2 356 aa11.6□□□□□ -0.55
COL6A2-201ENST00000300527 SEM1Q6ZVN7 128 aa11.6□□□□□ -0.55
COL6A2-201ENST00000300527 RAI1Q7Z5J4 1906 aaPredicted RBP11.6□□□□□ -0.55
COL6A2-201ENST00000300527 OR5A1Q8NGJ0 315 aa11.6□□□□□ -0.55
COL6A2-201ENST00000300527 SH2D1AO60880 128 aa11.6□□□□□ -0.55
COL6A2-201ENST00000300527 GATA1P15976 413 aaPredicted RBP11.6□□□□□ -0.55
COL6A2-201ENST00000300527 WFDC2Q14508 124 aa11.6□□□□□ -0.55
COL6A2-201ENST00000300527 ABCA4P78363 2273 aa11.6□□□□□ -0.55
COL6A2-201ENST00000300527 SPENQ96T58 3664 aaKnown RBP11.6□□□□□ -0.55
COL6A2-201ENST00000300527 TRBV19A0A075B6N1 114 aa11.59□□□□□ -0.55
COL6A2-201ENST00000300527 LGALS7P47929 136 aa11.59□□□□□ -0.55
COL6A2-201ENST00000300527 TMEM238LA0A1B0GVL6 79 aa11.59□□□□□ -0.55
COL6A2-201ENST00000300527 FCN3O75636 299 aa11.59□□□□□ -0.55
COL6A2-201ENST00000300527 ABHD17AQ96GS6 310 aa11.59□□□□□ -0.55
COL6A2-201ENST00000300527 AAMDCQ9H7C9 122 aa11.59□□□□□ -0.55
COL6A2-201ENST00000300527 ETDBQ3ZM63 59 aa11.59□□□□□ -0.55
COL6A2-201ENST00000300527 NEGR1Q7Z3B1 354 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms