RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 RAB31Q13636 194 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 ZNF726P1Q15940 193 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 C1orf194Q5T5A4 169 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 PXDC1Q5TGL8 231 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 C10orf113Q5VZT2 155 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 SIGLEC15Q6ZMC9 328 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 MIR17HGQ75NE6 70 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 LINC00305Q7Z4B0 112 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 GBGT1Q8N5D6 347 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 ARPC5LQ9BPX5 153 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 PSMG3Q9BT73 122 aaPredicted RBP4.38□□□□□ -1.71
SSX3-201ENST00000298396 KRTAP4-5Q9BYR2 181 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 GPR61Q9BZJ8 451 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 SLC25A22Q9H936 323 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 SEPSECSQ9HD40 501 aaKnown RBP4.38□□□□□ -1.71
SSX3-201ENST00000298396 A0A087X0K7 114 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 TRAV8-2A0A0B4J237 113 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 A0A1W2PS18 150 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 H3BQ15 152 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 H3BTX0 84 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 SLC17A3O00476 420 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 TAAR5O14804 337 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 SNRPCP09234 159 aaKnown RBP4.37□□□□□ -1.71
SSX3-201ENST00000298396 IGLC2P0DOY2 106 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 PYYP10082 97 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 PRB4P10163 310 aaPredicted RBP4.37□□□□□ -1.71
SSX3-201ENST00000298396 SPP1P10451 314 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 MALP21145 153 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 HLA-DMBP28068 263 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 TFPI2P48307 235 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 DEFB1P60022 68 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 ZNF266Q14584 549 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 GUCA2BQ16661 112 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 ZFP69Q49AA0 526 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 IGFL4Q6B9Z1 124 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 LCN12Q6JVE5 192 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 RPP25LQ8N5L8 163 aaKnown RBP4.37□□□□□ -1.71
SSX3-201ENST00000298396 STXBP6Q8NFX7 210 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 STOML3Q8TAV4 291 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 SCGB1C1Q8TD33 95 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 GATAD1Q8WUU5 269 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 PPP1R14BQ96C90 147 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 HYLS1Q96M11 299 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 SPAG8Q99932 426 aaPredicted RBP4.37□□□□□ -1.71
SSX3-201ENST00000298396 RPRMQ9NS64 109 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 UBQLN2Q9UHD9 624 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 FUT9Q9Y231 359 aa4.37□□□□□ -1.71
SSX3-201ENST00000298396 DYNC2H1Q8NCM8 4307 aaKnown RBP4.36□□□□□ -1.71
SSX3-201ENST00000298396 BORCS7-ASMTA0A0B4J1R7 106 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 TRAV2A0A0B4J234 112 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 KANTRA0A1W2PQU2 76 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 DIRC3C9JPN6 131 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 C17orf112F2Z3M2 114 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 JTBO76095 146 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 NDUFB4O95168 129 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 M6PRP20645 277 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 FHITP49789 147 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 CD81P60033 236 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 DEFA6Q01524 100 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 FAM78BQ5VT40 261 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 Q6ZRG5 221 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 RBPMS2Q6ZRY4 209 aaKnown RBP4.36□□□□□ -1.71
SSX3-201ENST00000298396 OR8I2Q8N0Y5 310 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 DEFB125Q8N687 156 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 RNF182Q8N6D2 247 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 ZNF709Q8N972 641 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 OR1L4Q8NGR5 311 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 IL17DQ8TAD2 202 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 FXYD5Q96DB9 178 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 SAT2Q96F10 170 aaPredicted RBP4.36□□□□□ -1.71
SSX3-201ENST00000298396 GRAMD2BQ96HH9 432 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 PFDN5Q99471 154 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 NEU1Q99519 415 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 ZNF471Q9BX82 626 aaPredicted RBP4.36□□□□□ -1.71
SSX3-201ENST00000298396 TMEM231Q9H6L2 316 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 MAP6D1Q9H9H5 199 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 NRN1Q9NPD7 142 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 KCNIP2Q9NS61 270 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 ZNF586Q9NXT0 402 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 CSMD3Q7Z407 3707 aa4.36□□□□□ -1.71
SSX3-201ENST00000298396 RBMY1BA6NDE4 496 aaKnown RBP4.35□□□□□ -1.71
SSX3-201ENST00000298396 RBMY1EA6NEQ0 496 aaKnown RBP4.35□□□□□ -1.71
SSX3-201ENST00000298396 HELTA6NFD8 242 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 HMGB3O15347 200 aaKnown RBP4.35□□□□□ -1.71
SSX3-201ENST00000298396 PFDN1O60925 122 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 CD5P06127 495 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 RBMY1DP0C7P1 496 aaKnown RBP4.35□□□□□ -1.71
SSX3-201ENST00000298396 ZNF688P0C7X2 276 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 GCSHP23434 173 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 BMI1P35226 326 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 GALR1P47211 349 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 RHOBP62745 196 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 SERF2P84101 59 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 ACOT6Q3I5F7 207 aaPredicted RBP4.35□□□□□ -1.71
SSX3-201ENST00000298396 TMEM41BQ5BJD5 291 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 GDF5OSQ5U4N7 250 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 FAM122CQ6P4D5 195 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 LINC00322Q6ZN03 302 aaPredicted RBP4.35□□□□□ -1.71
SSX3-201ENST00000298396 APRG1Q8IVJ8 170 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 BAP18Q8IXM2 172 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms