RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 HSPB8Q9UJY1 196 aa10.64□□□□□ -0.71
TNFRSF21-201ENST00000296861 PPIAL4CA0A0B4J2A2 164 aa10.64□□□□□ -0.71
TNFRSF21-201ENST00000296861 LIPFP07098 398 aa10.64□□□□□ -0.71
TNFRSF21-201ENST00000296861 FAM106CPP0CH98 169 aa10.64□□□□□ -0.71
TNFRSF21-201ENST00000296861 PPIAL4GP0DN37 164 aa10.64□□□□□ -0.71
TNFRSF21-201ENST00000296861 CKS2P33552 79 aa10.64□□□□□ -0.71
TNFRSF21-201ENST00000296861 FAM106AQ4KMX7 169 aa10.64□□□□□ -0.71
TNFRSF21-201ENST00000296861 OR5AN1Q8NGI8 311 aa10.64□□□□□ -0.71
TNFRSF21-201ENST00000296861 ABHD17AQ96GS6 310 aa10.64□□□□□ -0.71
TNFRSF21-201ENST00000296861 KLK15Q9H2R5 256 aa10.64□□□□□ -0.71
TNFRSF21-201ENST00000296861 UFC1Q9Y3C8 167 aa10.64□□□□□ -0.71
TNFRSF21-201ENST00000296861 IGKV1D-37A0A075B6S9 117 aa10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 LOC105371242A0A075B767 164 aa10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 GAGE10A6NGK3 116 aa10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 D6R8Y8 96 aa10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 H3BUT2 72 aa10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 CIDEAO60543 219 aa10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 USP9YO00507 2555 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 TLN2Q9Y4G6 2542 aa10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 MBD3L4A6NDZ8 208 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 MBD3L3A6NE82 208 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 MBD3L5A6NJ08 208 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 TMEM178BH3BS89 294 aa10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 IGHV1-8P0DP01 117 aa10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 MC5RP33032 325 aa10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 PRSS33Q8NF86 280 aa10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 MBD3L2Q8NHZ7 208 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF21-201ENST00000296861 ACACBO00763 2458 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 A0A0G2JNJ9 132 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 ZNF785A8K8V0 405 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 TIMM23O14925 209 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 CST9LQ9H4G1 147 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 Q9UFV3 132 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 TMEM189A5PLL7 270 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 C2orf70A6NJV1 201 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 GCSHP23434 173 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 ECSCRQ19T08 205 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 BCL6BQ8N143 479 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 RNASE6Q93091 150 aaKnown RBP10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 PSG8Q9UQ74 426 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 IGLV3-9A0A075B6K5 115 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 TRAV30A0A087WSZ9 112 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 IGHV2-70DA0A0C4DH43 119 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 RPL11P62913 178 aaKnown RBP10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 ZNF833PQ6ZTB9 187 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 SCNM1Q9BWG6 230 aa10.62□□□□□ -0.71
TNFRSF21-201ENST00000296861 K7ERU9 68 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 MBD6Q96DN6 1003 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 TTTY13Q9BZ97 58 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 MYO9AB2RTY4 2548 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 LOXP28300 417 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 GPR183P32249 361 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 LOXL1Q08397 574 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 GUSBP1Q15486 140 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 CFAP161Q6P656 301 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 PIP4P1Q86T03 277 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 ST20Q9HBF5 79 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 SIGLEC9Q9Y336 463 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 C7orf71A4D174 169 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 ITGB1BP1O14713 200 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 HLA-DMBP28068 263 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 OCIAD2Q56VL3 154 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 LYZL1Q6UWQ5 148 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 OR10AG1Q8NH19 301 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 C8orf46Q8TAG6 207 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 FMC1Q96HJ9 113 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 PRELID3AQ96N28 172 aa10.61□□□□□ -0.71
TNFRSF21-201ENST00000296861 SPRY2O43597 315 aa10.6□□□□□ -0.71
TNFRSF21-201ENST00000296861 LGALS7P47929 136 aa10.6□□□□□ -0.71
TNFRSF21-201ENST00000296861 PSG9Q00887 426 aa10.6□□□□□ -0.71
TNFRSF21-201ENST00000296861 Q86TA4 180 aa10.6□□□□□ -0.71
TNFRSF21-201ENST00000296861 GAGE12BA1L429 117 aa10.6□□□□□ -0.71
TNFRSF21-201ENST00000296861 POU2AF1Q16633 256 aa10.6□□□□□ -0.71
TNFRSF21-201ENST00000296861 NGBQ9NPG2 151 aa10.6□□□□□ -0.71
TNFRSF21-201ENST00000296861 CDKN1BP46527 198 aa10.6□□□□□ -0.71
TNFRSF21-201ENST00000296861 BVES-AS1Q5T3Y7 98 aa10.6□□□□□ -0.71
TNFRSF21-201ENST00000296861 SFTA2Q6UW10 78 aa10.6□□□□□ -0.71
TNFRSF21-201ENST00000296861 IGHV1-3A0A0C4DH29 117 aa10.59□□□□□ -0.71
TNFRSF21-201ENST00000296861 MEGF9Q9H1U4 602 aa10.59□□□□□ -0.71
TNFRSF21-201ENST00000296861 FAM120AOSQ5T036 256 aa10.59□□□□□ -0.71
TNFRSF21-201ENST00000296861 RNF125Q96EQ8 232 aa10.59□□□□□ -0.71
TNFRSF21-201ENST00000296861 LINC00527Q9UJ94 153 aa10.59□□□□□ -0.71
TNFRSF21-201ENST00000296861 IGHV3OR16-10A0A075B7F0 116 aa10.59□□□□□ -0.71
TNFRSF21-201ENST00000296861 MEF2CQ06413 473 aaPredicted RBP10.59□□□□□ -0.71
TNFRSF21-201ENST00000296861 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF21-201ENST00000296861 TAX1BP3O14907 124 aa10.58□□□□□ -0.72
TNFRSF21-201ENST00000296861 TOMM40O96008 361 aa10.58□□□□□ -0.72
TNFRSF21-201ENST00000296861 RASL11AQ6T310 242 aa10.58□□□□□ -0.72
TNFRSF21-201ENST00000296861 URB1-AS1Q96HZ7 61 aa10.58□□□□□ -0.72
TNFRSF21-201ENST00000296861 GOSR1O95249 250 aa10.58□□□□□ -0.72
TNFRSF21-201ENST00000296861 CD3EP07766 207 aa10.58□□□□□ -0.72
TNFRSF21-201ENST00000296861 MTURNQ8N3F0 131 aa10.58□□□□□ -0.72
TNFRSF21-201ENST00000296861 PTPRBP23467 1997 aa10.58□□□□□ -0.72
TNFRSF21-201ENST00000296861 TCF15Q12870 199 aa10.57□□□□□ -0.72
TNFRSF21-201ENST00000296861 PEF1Q9UBV8 284 aaKnown RBP10.57□□□□□ -0.72
TNFRSF21-201ENST00000296861 WNK1Q9H4A3 2382 aa10.57□□□□□ -0.72
TNFRSF21-201ENST00000296861 GATA4P43694 442 aa10.57□□□□□ -0.72
TNFRSF21-201ENST00000296861 FOXE3Q13461 319 aa10.57□□□□□ -0.72
TNFRSF21-201ENST00000296861 TRAV8-6A0A0B4J262 113 aa10.57□□□□□ -0.72
TNFRSF21-201ENST00000296861 SCGB2A2Q13296 93 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms