RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 SYNJ2BPP57105 145 aa13.87□□□□□ -0.19
CDCP1-201ENST00000296129 CD300EQ496F6 205 aaPredicted RBP13.87□□□□□ -0.19
CDCP1-201ENST00000296129 DMRTA1Q5VZB9 504 aa13.87□□□□□ -0.19
CDCP1-201ENST00000296129 RNF182Q8N6D2 247 aa13.87□□□□□ -0.19
CDCP1-201ENST00000296129 HEATR5AQ86XA9 2040 aa13.87□□□□□ -0.19
CDCP1-201ENST00000296129 TRGV1A0A0A0MS02 117 aa13.87□□□□□ -0.19
CDCP1-201ENST00000296129 TRAV2A0A0B4J234 112 aa13.87□□□□□ -0.19
CDCP1-201ENST00000296129 ZNF415Q09FC8 603 aa13.87□□□□□ -0.19
CDCP1-201ENST00000296129 DPH3P1Q9H4G8 78 aa13.87□□□□□ -0.19
CDCP1-201ENST00000296129 IGLV3-9A0A075B6K5 115 aa13.86□□□□□ -0.19
CDCP1-201ENST00000296129 SLC25A2Q9BXI2 301 aa13.86□□□□□ -0.19
CDCP1-201ENST00000296129 SFTA2Q6UW10 78 aa13.86□□□□□ -0.19
CDCP1-201ENST00000296129 RBMY1BA6NDE4 496 aaKnown RBP13.86□□□□□ -0.19
CDCP1-201ENST00000296129 RBMY1EA6NEQ0 496 aaKnown RBP13.86□□□□□ -0.19
CDCP1-201ENST00000296129 RBMY1DP0C7P1 496 aaKnown RBP13.86□□□□□ -0.19
CDCP1-201ENST00000296129 RBMY1A1P0DJD3 496 aaKnown RBP13.86□□□□□ -0.19
CDCP1-201ENST00000296129 RBMY1CP0DJD4 496 aa13.86□□□□□ -0.19
CDCP1-201ENST00000296129 ZNF134P52741 427 aa13.86□□□□□ -0.19
CDCP1-201ENST00000296129 SPTBN2O15020 2390 aa13.86□□□□□ -0.19
CDCP1-201ENST00000296129 MMP23AO75900 390 aa13.85□□□□□ -0.19
CDCP1-201ENST00000296129 IGHV3-53P01767 116 aa13.85□□□□□ -0.19
CDCP1-201ENST00000296129 ZNF876PQ49A33 203 aa13.85□□□□□ -0.19
CDCP1-201ENST00000296129 C14orf178Q8N769 122 aaPredicted RBP13.85□□□□□ -0.19
CDCP1-201ENST00000296129 CFHR2P36980 270 aa13.85□□□□□ -0.19
CDCP1-201ENST00000296129 MYO7BQ6PIF6 2116 aa13.85□□□□□ -0.19
CDCP1-201ENST00000296129 LINC00469Q8N7U9 141 aa13.85□□□□□ -0.19
CDCP1-201ENST00000296129 C9JQL5 133 aa13.85□□□□□ -0.19
CDCP1-201ENST00000296129 WT1P19544 449 aaPredicted RBP13.85□□□□□ -0.19
CDCP1-201ENST00000296129 C5orf30Q96GV9 206 aa13.85□□□□□ -0.19
CDCP1-201ENST00000296129 TPSG1Q9NRR2 321 aa13.85□□□□□ -0.19
CDCP1-201ENST00000296129 G3V318 75 aa13.85□□□□□ -0.19
CDCP1-201ENST00000296129 SMKR1H3BMG3 65 aa13.85□□□□□ -0.19
CDCP1-201ENST00000296129 GATA3P23771 443 aa13.85□□□□□ -0.19
CDCP1-201ENST00000296129 PRADC1Q9BSG0 188 aa13.85□□□□□ -0.19
CDCP1-201ENST00000296129 WIPF3A6NGB9 483 aa13.84□□□□□ -0.19
CDCP1-201ENST00000296129 DIAPH2-AS1Q14236 149 aa13.84□□□□□ -0.19
CDCP1-201ENST00000296129 UBE2E2Q96LR5 201 aa13.84□□□□□ -0.19
CDCP1-201ENST00000296129 IL17RELQ6ZVW7 336 aa13.84□□□□□ -0.19
CDCP1-201ENST00000296129 DENND4CQ5VZ89 1909 aa13.84□□□□□ -0.19
CDCP1-201ENST00000296129 CRPP02741 224 aa13.84□□□□□ -0.19
CDCP1-201ENST00000296129 PDE6HQ13956 83 aa13.84□□□□□ -0.19
CDCP1-201ENST00000296129 KIAA2026Q5HYC2 2103 aa13.83□□□□□ -0.19
CDCP1-201ENST00000296129 Q96MF0 132 aa13.83□□□□□ -0.19
CDCP1-201ENST00000296129 OR9G4Q8NGQ1 327 aa13.83□□□□□ -0.2
CDCP1-201ENST00000296129 C8orf49Q96NF6 230 aa13.83□□□□□ -0.2
CDCP1-201ENST00000296129 DOCK9Q9BZ29 2069 aa13.83□□□□□ -0.2
CDCP1-201ENST00000296129 K7EM74 188 aa13.83□□□□□ -0.2
CDCP1-201ENST00000296129 TTC32Q5I0X7 151 aa13.83□□□□□ -0.2
CDCP1-201ENST00000296129 LINC00311Q8N616 119 aa13.83□□□□□ -0.2
CDCP1-201ENST00000296129 FNDC4Q9H6D8 234 aaPredicted RBP13.83□□□□□ -0.2
CDCP1-201ENST00000296129 TSPAN13O95857 204 aa13.83□□□□□ -0.2
CDCP1-201ENST00000296129 INSP01308 110 aa13.83□□□□□ -0.2
CDCP1-201ENST00000296129 AMN1Q8IY45 258 aa13.83□□□□□ -0.2
CDCP1-201ENST00000296129 SMPXQ9UHP9 88 aa13.83□□□□□ -0.2
CDCP1-201ENST00000296129 IGHV4-39P01824 125 aa13.83□□□□□ -0.2
CDCP1-201ENST00000296129 RIPPLY3P57055 190 aa13.83□□□□□ -0.2
CDCP1-201ENST00000296129 TMEM75Q8N9X5 138 aa13.83□□□□□ -0.2
CDCP1-201ENST00000296129 YPEL3P61236 119 aaPredicted RBP13.82□□□□□ -0.2
CDCP1-201ENST00000296129 ZNF726P1Q15940 193 aa13.82□□□□□ -0.2
CDCP1-201ENST00000296129 ORAOV1Q8WV07 137 aa13.82□□□□□ -0.2
CDCP1-201ENST00000296129 LSM4Q9Y4Z0 139 aaKnown RBP13.82□□□□□ -0.2
CDCP1-201ENST00000296129 KIF26AQ9ULI4 1882 aaPredicted RBP13.82□□□□□ -0.2
CDCP1-201ENST00000296129 PLXNB3Q9ULL4 1909 aa13.82□□□□□ -0.2
CDCP1-201ENST00000296129 A0A0U1RRA0 63 aa13.82□□□□□ -0.2
CDCP1-201ENST00000296129 CSTL1Q9H114 145 aa13.82□□□□□ -0.2
CDCP1-201ENST00000296129 A0A087WWL8 130 aa13.82□□□□□ -0.2
CDCP1-201ENST00000296129 HOXA3O43365 443 aaPredicted RBP13.81□□□□□ -0.2
CDCP1-201ENST00000296129 MS4A6AQ9H2W1 248 aa13.81□□□□□ -0.2
CDCP1-201ENST00000296129 LINC01549A6NIU2 74 aa13.81□□□□□ -0.2
CDCP1-201ENST00000296129 GFRA4Q9GZZ7 299 aa13.81□□□□□ -0.2
CDCP1-201ENST00000296129 DTX2Q86UW9 622 aa13.8□□□□□ -0.2
CDCP1-201ENST00000296129 YLPM1P49750 1951 aaKnown RBP13.8□□□□□ -0.2
CDCP1-201ENST00000296129 C11orf68Q9H3H3 251 aaKnown RBP13.8□□□□□ -0.2
CDCP1-201ENST00000296129 DKK1O94907 266 aa13.8□□□□□ -0.2
CDCP1-201ENST00000296129 WT1-ASQ06250 92 aa13.8□□□□□ -0.2
CDCP1-201ENST00000296129 RNF166Q96A37 237 aaPredicted RBP13.8□□□□□ -0.2
CDCP1-201ENST00000296129 CYYR1Q96J86 154 aa13.8□□□□□ -0.2
CDCP1-201ENST00000296129 hDV102S1A0JD36 115 aa13.8□□□□□ -0.2
CDCP1-201ENST00000296129 RPL36AP83881 106 aaKnown RBP13.8□□□□□ -0.2
CDCP1-201ENST00000296129 RPL36ALQ969Q0 106 aaKnown RBP13.8□□□□□ -0.2
CDCP1-201ENST00000296129 DEFB131AP59861 70 aa13.8□□□□□ -0.2
CDCP1-201ENST00000296129 LINC01559Q495D7 138 aa13.8□□□□□ -0.2
CDCP1-201ENST00000296129 TMEM158Q8WZ71 300 aa13.8□□□□□ -0.2
CDCP1-201ENST00000296129 VCYO14598 125 aa13.79□□□□□ -0.2
CDCP1-201ENST00000296129 ARMS2P0C7Q2 107 aa13.79□□□□□ -0.2
CDCP1-201ENST00000296129 C3orf79P0CE67 100 aa13.79□□□□□ -0.2
CDCP1-201ENST00000296129 SHISA9B4DS77 424 aa13.79□□□□□ -0.2
CDCP1-201ENST00000296129 HAPLN4Q86UW8 402 aa13.79□□□□□ -0.2
CDCP1-201ENST00000296129 MRPL27Q9P0M9 148 aaKnown RBP13.79□□□□□ -0.2
CDCP1-201ENST00000296129 HSD52Q0P140 79 aa13.78□□□□□ -0.2
CDCP1-201ENST00000296129 FAM120AOSQ5T036 256 aa13.78□□□□□ -0.2
CDCP1-201ENST00000296129 TRBV19A0A075B6N1 114 aa13.78□□□□□ -0.2
CDCP1-201ENST00000296129 PLNP26678 52 aa13.78□□□□□ -0.2
CDCP1-201ENST00000296129 PAX2Q02962 417 aa13.78□□□□□ -0.2
CDCP1-201ENST00000296129 GPR179Q6PRD1 2367 aa13.78□□□□□ -0.2
CDCP1-201ENST00000296129 GRNP28799 593 aaKnown RBP13.78□□□□□ -0.2
CDCP1-201ENST00000296129 TCF15Q12870 199 aa13.78□□□□□ -0.2
CDCP1-201ENST00000296129 ZNF407Q9C0G0 2248 aa13.78□□□□□ -0.2
CDCP1-201ENST00000296129 NPC2P61916 151 aa13.77□□□□□ -0.2
CDCP1-201ENST00000296129 LINC01619G3V211 115 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms