RNA–Protein interactions for RNA: ENST00000293861.7

SNRNP25-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNRNP25, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-201ENST00000293861 COX19Q49B96 90 aa16.64■□□□□ 0.26
SNRNP25-201ENST00000293861 GOLT1AQ6ZVE7 132 aa16.64■□□□□ 0.26
SNRNP25-201ENST00000293861 HIST3H2BBQ8N257 126 aa16.64■□□□□ 0.26
SNRNP25-201ENST00000293861 OR5R1Q8NH85 324 aa16.64■□□□□ 0.26
SNRNP25-201ENST00000293861 AAMDCQ9H7C9 122 aa16.64■□□□□ 0.26
SNRNP25-201ENST00000293861 PRRC2AP48634 2157 aaKnown RBP16.64■□□□□ 0.25
SNRNP25-201ENST00000293861 IFITM10A6NMD0 228 aa16.64■□□□□ 0.25
SNRNP25-201ENST00000293861 K7EQM0 130 aa16.64■□□□□ 0.25
SNRNP25-201ENST00000293861 TRGV3P03979 118 aa16.64■□□□□ 0.25
SNRNP25-201ENST00000293861 IER3P46695 156 aa16.64■□□□□ 0.25
SNRNP25-201ENST00000293861 MEOX2P50222 304 aa16.64■□□□□ 0.25
SNRNP25-201ENST00000293861 BLCAPP62952 87 aa16.64■□□□□ 0.25
SNRNP25-201ENST00000293861 CYB5R2Q6BCY4 276 aa16.64■□□□□ 0.25
SNRNP25-201ENST00000293861 SERTM2A0A1B0GWG4 89 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 CLPSL1A2RUU4 121 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 C19orf71A6NCJ1 209 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 DIRC3C9JPN6 131 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 BUB3O43684 328 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 IGHV4-59P01825 116 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 SMIM6P0DI80 62 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 USMG5Q96IX5 58 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 PRSS22Q9GZN4 317 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 GNB4Q9HAV0 340 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 SMAD5-AS1Q9Y6J3 95 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 MAP1AP78559 2803 aaPredicted RBP16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 DOPEY2Q9Y3R5 2298 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 CELSR1Q9NYQ6 3014 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 TENM4Q6N022 2769 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 IGHV3-35A0A0C4DH35 117 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 IZUMO1RA6ND01 250 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 PRR27Q6MZM9 219 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 GNB1LQ9BYB4 327 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 ZFP30Q9Y2G7 519 aa16.62■□□□□ 0.25
SNRNP25-201ENST00000293861 A0A087X0K7 114 aa16.61■□□□□ 0.25
SNRNP25-201ENST00000293861 TRAV8-1A0A0A6YYK1 113 aa16.61■□□□□ 0.25
SNRNP25-201ENST00000293861 CT83Q5H943 113 aa16.61■□□□□ 0.25
SNRNP25-201ENST00000293861 GFI1BQ5VTD9 330 aa16.61■□□□□ 0.25
SNRNP25-201ENST00000293861 C12orf57Q99622 126 aa16.61■□□□□ 0.25
SNRNP25-201ENST00000293861 CSMD2Q7Z408 3487 aa16.61■□□□□ 0.25
SNRNP25-201ENST00000293861 PSG3Q16557 428 aa16.6■□□□□ 0.25
SNRNP25-201ENST00000293861 C1orf194Q5T5A4 169 aa16.6■□□□□ 0.25
SNRNP25-201ENST00000293861 WDR73Q6P4I2 378 aa16.6■□□□□ 0.25
SNRNP25-201ENST00000293861 TSKUQ8WUA8 353 aa16.6■□□□□ 0.25
SNRNP25-201ENST00000293861 NOL4LQ96MY1 436 aaPredicted RBP16.6■□□□□ 0.25
SNRNP25-201ENST00000293861 CSPG4Q6UVK1 2322 aa16.6■□□□□ 0.25
SNRNP25-201ENST00000293861 XKRY2A2RUG3 117 aa16.6■□□□□ 0.25
SNRNP25-201ENST00000293861 MT-ND6P03923 174 aa16.6■□□□□ 0.25
SNRNP25-201ENST00000293861 CBLN1P23435 193 aa16.6■□□□□ 0.25
SNRNP25-201ENST00000293861 TPPP2P59282 170 aa16.6■□□□□ 0.25
SNRNP25-201ENST00000293861 LINC00322Q6ZN03 302 aaPredicted RBP16.6■□□□□ 0.25
SNRNP25-201ENST00000293861 U3KQE9 123 aa16.6■□□□□ 0.25
SNRNP25-201ENST00000293861 APCP25054 2843 aa16.59■□□□□ 0.25
SNRNP25-201ENST00000293861 CA1P00915 261 aaPredicted RBP16.59■□□□□ 0.25
SNRNP25-201ENST00000293861 IGLV1-40P01703 118 aa16.59■□□□□ 0.25
SNRNP25-201ENST00000293861 TCL1AP56279 114 aa16.59■□□□□ 0.25
SNRNP25-201ENST00000293861 HIST2H2BCQ6DN03 193 aa16.59■□□□□ 0.25
SNRNP25-201ENST00000293861 RASL11AQ6T310 242 aa16.59■□□□□ 0.25
SNRNP25-201ENST00000293861 PRNTQ86SH4 94 aa16.59■□□□□ 0.25
SNRNP25-201ENST00000293861 GPR61Q9BZJ8 451 aa16.59■□□□□ 0.25
SNRNP25-201ENST00000293861 RPP21Q9H633 154 aaKnown RBP16.59■□□□□ 0.25
SNRNP25-201ENST00000293861 PSG8Q9UQ74 426 aa16.59■□□□□ 0.25
SNRNP25-201ENST00000293861 IGHV3OR16-8A0A075B7F1 116 aa16.58■□□□□ 0.25
SNRNP25-201ENST00000293861 M0R3E3 92 aa16.58■□□□□ 0.25
SNRNP25-201ENST00000293861 CSN1S1P47710 185 aa16.58■□□□□ 0.25
SNRNP25-201ENST00000293861 CFHR3Q02985 330 aa16.58■□□□□ 0.25
SNRNP25-201ENST00000293861 Q6YL49 198 aa16.58■□□□□ 0.25
SNRNP25-201ENST00000293861 Q6ZS46 218 aa16.58■□□□□ 0.25
SNRNP25-201ENST00000293861 MRPL18Q9H0U6 180 aaKnown RBP16.58■□□□□ 0.25
SNRNP25-201ENST00000293861 NAT8BQ9UHF3 227 aa16.58■□□□□ 0.25
SNRNP25-201ENST00000293861 NPIPB6E9PJ23 425 aa16.58■□□□□ 0.24
SNRNP25-201ENST00000293861 S100A2P29034 98 aa16.58■□□□□ 0.24
SNRNP25-201ENST00000293861 METTL26Q96S19 204 aa16.58■□□□□ 0.24
SNRNP25-201ENST00000293861 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.57■□□□□ 0.24
SNRNP25-201ENST00000293861 FBLL1A6NHQ2 334 aaKnown RBP16.57■□□□□ 0.24
SNRNP25-201ENST00000293861 SNURFLB1AK76 121 aa16.57■□□□□ 0.24
SNRNP25-201ENST00000293861 FRMD6-AS1P0C7T7 363 aa16.57■□□□□ 0.24
SNRNP25-201ENST00000293861 WIPF2Q8TF74 440 aaPredicted RBP16.57■□□□□ 0.24
SNRNP25-201ENST00000293861 ZNF331Q9NQX6 463 aaPredicted RBP16.57■□□□□ 0.24
SNRNP25-201ENST00000293861 VPREB3Q9UKI3 123 aa16.57■□□□□ 0.24
SNRNP25-201ENST00000293861 CREBBPQ92793 2442 aa16.57■□□□□ 0.24
SNRNP25-201ENST00000293861 P01737 135 aa16.57■□□□□ 0.24
SNRNP25-201ENST00000293861 ARL3P36405 182 aa16.57■□□□□ 0.24
SNRNP25-201ENST00000293861 CIARTQ8N365 385 aaPredicted RBP16.57■□□□□ 0.24
SNRNP25-201ENST00000293861 OR4B1Q8NGF8 309 aa16.57■□□□□ 0.24
SNRNP25-201ENST00000293861 DAZAP1Q96EP5 407 aaKnown RBP16.57■□□□□ 0.24
SNRNP25-201ENST00000293861 PRDM13Q9H4Q3 707 aa16.57■□□□□ 0.24
SNRNP25-201ENST00000293861 A8MWL6 223 aa16.56■□□□□ 0.24
SNRNP25-201ENST00000293861 C16orf54Q6UWD8 224 aa16.56■□□□□ 0.24
SNRNP25-201ENST00000293861 TMEM136Q6ZRR5 245 aa16.56■□□□□ 0.24
SNRNP25-201ENST00000293861 NUP35Q8NFH5 326 aa16.56■□□□□ 0.24
SNRNP25-201ENST00000293861 ZFHX3Q15911 3703 aa16.55■□□□□ 0.24
SNRNP25-201ENST00000293861 NEU1Q99519 415 aa16.55■□□□□ 0.24
SNRNP25-201ENST00000293861 GFRA4Q9GZZ7 299 aa16.55■□□□□ 0.24
SNRNP25-201ENST00000293861 A0A0G2JLM5 398 aa16.55■□□□□ 0.24
SNRNP25-201ENST00000293861 FAM231BA6NCW3 169 aa16.55■□□□□ 0.24
SNRNP25-201ENST00000293861 NDUFA4O00483 81 aa16.55■□□□□ 0.24
SNRNP25-201ENST00000293861 PF4V1P10720 104 aa16.55■□□□□ 0.24
SNRNP25-201ENST00000293861 GBGT1Q8N5D6 347 aa16.55■□□□□ 0.24
SNRNP25-201ENST00000293861 TEX29Q8N6K0 151 aa16.55■□□□□ 0.24
SNRNP25-201ENST00000293861 WFDC11Q8NEX6 87 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms