RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 FABP2P12104 132 aa11.38□□□□□ -0.59
TNFRSF11A-201ENST00000269485 FAM71F2Q6NXP2 309 aa11.38□□□□□ -0.59
TNFRSF11A-201ENST00000269485 OR4C13Q8NGP0 309 aa11.38□□□□□ -0.59
TNFRSF11A-201ENST00000269485 C11orf1Q9H5F2 150 aa11.38□□□□□ -0.59
TNFRSF11A-201ENST00000269485 FOXA2Q9Y261 457 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF11A-201ENST00000269485 LINC00312Q9Y6C7 94 aa11.38□□□□□ -0.59
TNFRSF11A-201ENST00000269485 TET2Q6N021 2002 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF11A-201ENST00000269485 TRAV8-1A0A0A6YYK1 113 aa11.38□□□□□ -0.59
TNFRSF11A-201ENST00000269485 SMAD7O15105 426 aaKnown RBP11.38□□□□□ -0.59
TNFRSF11A-201ENST00000269485 OR5AL1P0C617 328 aa11.37□□□□□ -0.59
TNFRSF11A-201ENST00000269485 GCSHP23434 173 aa11.37□□□□□ -0.59
TNFRSF11A-201ENST00000269485 NMUP48645 174 aa11.37□□□□□ -0.59
TNFRSF11A-201ENST00000269485 MORN5Q5VZ52 161 aa11.37□□□□□ -0.59
TNFRSF11A-201ENST00000269485 EBLN2Q6P2I7 272 aa11.37□□□□□ -0.59
TNFRSF11A-201ENST00000269485 TMEM144Q7Z5S9 345 aa11.37□□□□□ -0.59
TNFRSF11A-201ENST00000269485 WFDC3Q8IUB2 231 aa11.37□□□□□ -0.59
TNFRSF11A-201ENST00000269485 Q8N976 141 aa11.37□□□□□ -0.59
TNFRSF11A-201ENST00000269485 DSCAML1Q8TD84 2053 aa11.37□□□□□ -0.59
TNFRSF11A-201ENST00000269485 A0A1W2PPR1 153 aa11.37□□□□□ -0.59
TNFRSF11A-201ENST00000269485 FAM181BA6NEQ2 426 aa11.37□□□□□ -0.59
TNFRSF11A-201ENST00000269485 ZBTB34Q8NCN2 500 aa11.37□□□□□ -0.59
TNFRSF11A-201ENST00000269485 TMEM133Q9H2Q1 129 aa11.37□□□□□ -0.59
TNFRSF11A-201ENST00000269485 HLA-DQA1P01909 254 aa11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 MT-ND6P03923 174 aa11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 CENPWQ5EE01 88 aa11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 OR8A1Q8NGG7 326 aa11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 OR1L4Q8NGR5 311 aa11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 SS18L2Q9UHA2 77 aa11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 PRNDQ9UKY0 176 aa11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 C15orf61A6NNL5 157 aa11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 SRD5A1P18405 259 aa11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 YPEL3P61236 119 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 IBA57Q5T440 356 aaKnown RBP11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 MAP1LC3CQ9BXW4 147 aa11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 MRPL36Q9P0J6 103 aaKnown RBP11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 FCGR2BP31994 310 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 GGTLC1Q9BX51 225 aa11.36□□□□□ -0.59
TNFRSF11A-201ENST00000269485 LHBP01229 141 aa11.35□□□□□ -0.59
TNFRSF11A-201ENST00000269485 RHOBP62745 196 aa11.35□□□□□ -0.59
TNFRSF11A-201ENST00000269485 WT1-ASQ06250 92 aa11.35□□□□□ -0.59
TNFRSF11A-201ENST00000269485 TMEM14EPQ6UXP3 125 aa11.35□□□□□ -0.59
TNFRSF11A-201ENST00000269485 GEMIN7Q9H840 131 aaKnown RBP11.35□□□□□ -0.59
TNFRSF11A-201ENST00000269485 HSPB8Q9UJY1 196 aa11.35□□□□□ -0.59
TNFRSF11A-201ENST00000269485 VPS13CQ709C8 3753 aa11.35□□□□□ -0.59
TNFRSF11A-201ENST00000269485 AMY1AP04745 511 aa11.35□□□□□ -0.59
TNFRSF11A-201ENST00000269485 ZNF48Q96MX3 618 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF11A-201ENST00000269485 KCNIP2Q9NS61 270 aa11.35□□□□□ -0.59
TNFRSF11A-201ENST00000269485 A0A0G2JLM5 398 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 TEX48A0A1B0GUV7 120 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 H0YJW9 148 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 CLEC3BP05452 202 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 HSD52Q0P140 79 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 SERTM2A0A1B0GWG4 89 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 CD5LO43866 347 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 EFNB3Q15768 340 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 LINC00305Q7Z4B0 112 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 ZNF329Q86UD4 541 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 TRAV40A0A0B4J280 105 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 PGPA6NDG6 321 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 UPK2O00526 184 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 LIPFP07098 398 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 HTN1P15515 57 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 Q0VG73 95 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 FOXE3Q13461 319 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 SRSF7Q16629 238 aaKnown RBP eCLIP11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 VWC2Q2TAL6 325 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 TMEM97Q5BJF2 176 aa11.34□□□□□ -0.59
TNFRSF11A-201ENST00000269485 K7EN84 100 aa11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 SUB1P53999 127 aaKnown RBP eCLIP11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 SLAQ13239 276 aa11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 C10orf113Q5VZT2 155 aa11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 DEFB125Q8N687 156 aa11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 ST20Q9HBF5 79 aa11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 A0A1W2PPI3 338 aa11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 FCN3O75636 299 aa11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 ANXA2RQ3ZCQ2 193 aa11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 PRSS57Q6UWY2 283 aa11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 SRSF12Q8WXF0 261 aaKnown RBP11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 UBR5O95071 2799 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 IL4P05112 153 aa11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 FXYD7P58549 80 aa11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 SPATA12Q7Z6I5 190 aa11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 NUP37Q8NFH4 326 aa11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 OR4F17Q8NGA8 305 aa11.33□□□□□ -0.6
TNFRSF11A-201ENST00000269485 G3V318 75 aa11.32□□□□□ -0.6
TNFRSF11A-201ENST00000269485 F2RL2O00254 374 aa11.32□□□□□ -0.6
TNFRSF11A-201ENST00000269485 SLC25A48Q6ZT89 311 aaKnown RBP11.32□□□□□ -0.6
TNFRSF11A-201ENST00000269485 YTHDF2Q9Y5A9 579 aaKnown RBP11.32□□□□□ -0.6
TNFRSF11A-201ENST00000269485 G3V4G9 280 aa11.32□□□□□ -0.6
TNFRSF11A-201ENST00000269485 IGLC1P0CG04 106 aa11.32□□□□□ -0.6
TNFRSF11A-201ENST00000269485 EXOC3-AS1Q8N2X6 119 aa11.32□□□□□ -0.6
TNFRSF11A-201ENST00000269485 RASL11BQ9BPW5 248 aa11.32□□□□□ -0.6
TNFRSF11A-201ENST00000269485 GCHFRP30047 84 aa11.32□□□□□ -0.6
TNFRSF11A-201ENST00000269485 LGALS7P47929 136 aa11.32□□□□□ -0.6
TNFRSF11A-201ENST00000269485 SFTA2Q6UW10 78 aa11.32□□□□□ -0.6
TNFRSF11A-201ENST00000269485 PRNTQ86SH4 94 aa11.32□□□□□ -0.6
TNFRSF11A-201ENST00000269485 GNB1LQ9BYB4 327 aa11.32□□□□□ -0.6
TNFRSF11A-201ENST00000269485 IGKV1OR2-108A0A075B7D4 117 aa11.31□□□□□ -0.6
TNFRSF11A-201ENST00000269485 IGHV1-3A0A0C4DH29 117 aa11.31□□□□□ -0.6
TNFRSF11A-201ENST00000269485 IGKV3-20P01619 116 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms