RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 LOC102724200A0A096LPH7 203 aaPredicted RBP13.41□□□□□ -0.26
PHRF1-201ENST00000264555 NDUFS6O75380 124 aaKnown RBP13.41□□□□□ -0.26
PHRF1-201ENST00000264555 ZNF256Q9Y2P7 627 aaPredicted RBP13.41□□□□□ -0.26
PHRF1-201ENST00000264555 A0A1W2PRX2 142 aa13.41□□□□□ -0.26
PHRF1-201ENST00000264555 TMEM8BA6NDV4 472 aa13.41□□□□□ -0.26
PHRF1-201ENST00000264555 PRR20EP86478 221 aa13.41□□□□□ -0.26
PHRF1-201ENST00000264555 PRR20CP86479 221 aa13.41□□□□□ -0.26
PHRF1-201ENST00000264555 PRR20DP86480 221 aa13.41□□□□□ -0.26
PHRF1-201ENST00000264555 PRR20BP86481 221 aa13.41□□□□□ -0.26
PHRF1-201ENST00000264555 PRR20AP86496 221 aa13.41□□□□□ -0.26
PHRF1-201ENST00000264555 TMEM249Q2WGJ8 235 aa13.41□□□□□ -0.26
PHRF1-201ENST00000264555 SPRNQ5BIV9 151 aa13.41□□□□□ -0.26
PHRF1-201ENST00000264555 COPS9Q8WXC6 57 aa13.41□□□□□ -0.26
PHRF1-201ENST00000264555 TYMSP04818 313 aa13.41□□□□□ -0.26
PHRF1-201ENST00000264555 TMEM75Q8N9X5 138 aa13.41□□□□□ -0.26
PHRF1-201ENST00000264555 ZFHX2Q9C0A1 2572 aaPredicted RBP13.41□□□□□ -0.26
PHRF1-201ENST00000264555 NDUFA3O95167 84 aa13.41□□□□□ -0.26
PHRF1-201ENST00000264555 THAP8Q8NA92 274 aa13.41□□□□□ -0.26
PHRF1-201ENST00000264555 SHANK1Q9Y566 2161 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 C10orf142B7Z368 130 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 ATP6V0E1O15342 81 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 PLP1P60201 277 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 Q0VG73 95 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 DENND4AQ7Z401 1863 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 DPM2O94777 84 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 CD33P20138 364 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 LINC01559Q495D7 138 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 IGFL4Q6B9Z1 124 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 TRGV11A0A075B6L2 103 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 FAM231BA6NCW3 169 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 CTSZQ9UBR2 303 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 TRBV19A0A075B6N1 114 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 CT83Q5H943 113 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 LINC01356Q8N9X3 169 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 C11orf52Q96A22 123 aa13.4□□□□□ -0.26
PHRF1-201ENST00000264555 DOCK10Q96BY6 2186 aa13.4□□□□□ -0.27
PHRF1-201ENST00000264555 MSMBP08118 114 aa13.39□□□□□ -0.27
PHRF1-201ENST00000264555 CYSLTR1Q9Y271 337 aa13.39□□□□□ -0.27
PHRF1-201ENST00000264555 GATA3P23771 443 aa13.39□□□□□ -0.27
PHRF1-201ENST00000264555 STHQ8IWL8 128 aa13.39□□□□□ -0.27
PHRF1-201ENST00000264555 PRR31Q5SQ13 230 aa13.38□□□□□ -0.27
PHRF1-201ENST00000264555 MS4A6AQ9H2W1 248 aa13.38□□□□□ -0.27
PHRF1-201ENST00000264555 TMEM14CQ9P0S9 112 aa13.38□□□□□ -0.27
PHRF1-201ENST00000264555 NCR2O95944 276 aa13.38□□□□□ -0.27
PHRF1-201ENST00000264555 C2orf88Q9BSF0 95 aa13.38□□□□□ -0.27
PHRF1-201ENST00000264555 IGHV1-69DA0A0B4J2H0 117 aa13.38□□□□□ -0.27
PHRF1-201ENST00000264555 IGHV1-69P01742 117 aa13.38□□□□□ -0.27
PHRF1-201ENST00000264555 C3orf79P0CE67 100 aa13.38□□□□□ -0.27
PHRF1-201ENST00000264555 SEM1Q6ZVN7 128 aa13.38□□□□□ -0.27
PHRF1-201ENST00000264555 CRXO43186 299 aaPredicted RBP13.38□□□□□ -0.27
PHRF1-201ENST00000264555 RUSC1-AS1Q66K80 236 aa13.38□□□□□ -0.27
PHRF1-201ENST00000264555 FAM231DQ6ZW35 169 aa13.38□□□□□ -0.27
PHRF1-201ENST00000264555 WNK2Q9Y3S1 2297 aa13.37□□□□□ -0.27
PHRF1-201ENST00000264555 IGHV2-70P01814 119 aa13.37□□□□□ -0.27
PHRF1-201ENST00000264555 V9GYV3 84 aa13.37□□□□□ -0.27
PHRF1-201ENST00000264555 LINC01549A6NIU2 74 aa13.37□□□□□ -0.27
PHRF1-201ENST00000264555 SUMO2P61956 95 aaKnown RBP13.37□□□□□ -0.27
PHRF1-201ENST00000264555 LAGE3Q14657 143 aa13.37□□□□□ -0.27
PHRF1-201ENST00000264555 TMEM101Q96IK0 257 aa13.37□□□□□ -0.27
PHRF1-201ENST00000264555 RHPN1-AS1Q9BWJ2 59 aa13.37□□□□□ -0.27
PHRF1-201ENST00000264555 SMPXQ9UHP9 88 aa13.37□□□□□ -0.27
PHRF1-201ENST00000264555 ZNF114Q8NC26 417 aa13.37□□□□□ -0.27
PHRF1-201ENST00000264555 PCDH15Q96QU1 1955 aa13.36□□□□□ -0.27
PHRF1-201ENST00000264555 WFDC12Q8WWY7 111 aa13.36□□□□□ -0.27
PHRF1-201ENST00000264555 JMJD8Q96S16 334 aa13.36□□□□□ -0.27
PHRF1-201ENST00000264555 LSM4Q9Y4Z0 139 aaKnown RBP13.36□□□□□ -0.27
PHRF1-201ENST00000264555 IGKCP01834 107 aa13.36□□□□□ -0.27
PHRF1-201ENST00000264555 IGLC1P0CG04 106 aa13.36□□□□□ -0.27
PHRF1-201ENST00000264555 MEIG1Q5JSS6 88 aa13.36□□□□□ -0.27
PHRF1-201ENST00000264555 C1orf122Q6ZSJ8 110 aa13.36□□□□□ -0.27
PHRF1-201ENST00000264555 DAZ1Q9NQZ3 744 aaKnown RBP13.36□□□□□ -0.27
PHRF1-201ENST00000264555 IGHV2-5P01817 119 aa13.35□□□□□ -0.27
PHRF1-201ENST00000264555 IFI27P40305 119 aaPredicted RBP13.35□□□□□ -0.27
PHRF1-201ENST00000264555 MTURNQ8N3F0 131 aa13.35□□□□□ -0.27
PHRF1-201ENST00000264555 PIP4P2Q8N4L2 257 aa13.35□□□□□ -0.27
PHRF1-201ENST00000264555 H3BRN7 92 aa13.35□□□□□ -0.27
PHRF1-201ENST00000264555 PLA2G2EQ9NZK7 142 aa13.35□□□□□ -0.27
PHRF1-201ENST00000264555 C22orf46C9J442 243 aa13.35□□□□□ -0.27
PHRF1-201ENST00000264555 ZNF688P0C7X2 276 aa13.35□□□□□ -0.27
PHRF1-201ENST00000264555 FXYD5Q96DB9 178 aa13.35□□□□□ -0.27
PHRF1-201ENST00000264555 VCX2Q9H322 139 aa13.35□□□□□ -0.27
PHRF1-201ENST00000264555 CACNA1BQ00975 2339 aa13.34□□□□□ -0.27
PHRF1-201ENST00000264555 H3BRM9 83 aa13.34□□□□□ -0.27
PHRF1-201ENST00000264555 DOCK11Q5JSL3 2073 aa13.34□□□□□ -0.27
PHRF1-201ENST00000264555 IGLC7A0M8Q6 106 aa13.34□□□□□ -0.27
PHRF1-201ENST00000264555 ARMS2P0C7Q2 107 aa13.34□□□□□ -0.27
PHRF1-201ENST00000264555 ERCC8Q13216 396 aa13.34□□□□□ -0.27
PHRF1-201ENST00000264555 ALKBH7Q9BT30 221 aaPredicted RBP13.34□□□□□ -0.27
PHRF1-201ENST00000264555 FNDC4Q9H6D8 234 aaPredicted RBP13.34□□□□□ -0.27
PHRF1-201ENST00000264555 G3V318 75 aa13.34□□□□□ -0.27
PHRF1-201ENST00000264555 SELENOKQ9Y6D0 94 aa13.34□□□□□ -0.27
PHRF1-201ENST00000264555 ALPK3Q96L96 1907 aa13.34□□□□□ -0.27
PHRF1-201ENST00000264555 ADAMTS9Q9P2N4 1935 aa13.33□□□□□ -0.27
PHRF1-201ENST00000264555 GRNP28799 593 aaKnown RBP13.33□□□□□ -0.27
PHRF1-201ENST00000264555 MRPL16Q9NX20 251 aaKnown RBP13.33□□□□□ -0.27
PHRF1-201ENST00000264555 CHTOPQ9Y3Y2 248 aaKnown RBP13.33□□□□□ -0.27
PHRF1-201ENST00000264555 ABCA4P78363 2273 aa13.33□□□□□ -0.28
PHRF1-201ENST00000264555 AMN1Q8IY45 258 aa13.33□□□□□ -0.28
PHRF1-201ENST00000264555 DPH3P1Q9H4G8 78 aa13.33□□□□□ -0.28
PHRF1-201ENST00000264555 TRGV2A0A075B6R0 118 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms