RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 HIST1H2BOP23527 126 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 HIST1H2BBP33778 126 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 HIST1H2BDP58876 126 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 HIST1H2BCP62807 126 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 HIST2H2BEQ16778 126 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.89□□□□□ -0.35
SHANK3-201ENST00000262795 HIST1H2BHQ93079 126 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 HIST1H2BNQ99877 126 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 HIST1H2BMQ99879 126 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 RTBDNQ9BSG5 229 aaPredicted RBP12.89□□□□□ -0.35
SHANK3-201ENST00000262795 DOCK10Q96BY6 2186 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 NDUFS5O43920 106 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 TM2D1Q9BX74 207 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 H0YJW9 148 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 SPINK8P0C7L1 97 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 NDUFAF3Q9BU61 184 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 LCTP09848 1927 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 C1orf43Q9BWL3 253 aa12.88□□□□□ -0.35
SHANK3-201ENST00000262795 HEPN1Q6WQI6 88 aa12.88□□□□□ -0.35
SHANK3-201ENST00000262795 RCC1LQ96I51 464 aaKnown RBP12.88□□□□□ -0.35
SHANK3-201ENST00000262795 ZNF319Q9P2F9 582 aa12.88□□□□□ -0.35
SHANK3-201ENST00000262795 SRSF8Q9BRL6 282 aaKnown RBP12.88□□□□□ -0.35
SHANK3-201ENST00000262795 CLPSL1A2RUU4 121 aa12.88□□□□□ -0.35
SHANK3-201ENST00000262795 GGTLC3B5MD39 225 aa12.88□□□□□ -0.35
SHANK3-201ENST00000262795 MGAMO43451 1857 aa12.87□□□□□ -0.35
SHANK3-201ENST00000262795 ANGP03950 147 aaKnown RBP12.87□□□□□ -0.35
SHANK3-201ENST00000262795 RPL18AQ02543 176 aaKnown RBP12.87□□□□□ -0.35
SHANK3-201ENST00000262795 ESDP10768 282 aa12.87□□□□□ -0.35
SHANK3-201ENST00000262795 DUX4L9Q6RFH8 374 aaPredicted RBP12.87□□□□□ -0.35
SHANK3-201ENST00000262795 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.87□□□□□ -0.352e-6■■■□□ 16.6
SHANK3-201ENST00000262795 SIGLEC9Q9Y336 463 aa12.87□□□□□ -0.35
SHANK3-201ENST00000262795 IGKV1-5P01602 117 aa12.87□□□□□ -0.35
SHANK3-201ENST00000262795 SRRM5B3KS81 715 aa12.87□□□□□ -0.35
SHANK3-201ENST00000262795 DEFB4AO15263 64 aa12.87□□□□□ -0.35
SHANK3-201ENST00000262795 IGKV1-39P01597 117 aa12.87□□□□□ -0.35
SHANK3-201ENST00000262795 IGKV1D-39P04432 117 aa12.87□□□□□ -0.35
SHANK3-201ENST00000262795 PFN2P35080 140 aa12.87□□□□□ -0.35
SHANK3-201ENST00000262795 RFNGQ9Y644 331 aa12.87□□□□□ -0.35
SHANK3-201ENST00000262795 TEX43Q6ZNM6 134 aa12.87□□□□□ -0.35
SHANK3-201ENST00000262795 CNOT1A5YKK6 2376 aaKnown RBP12.87□□□□□ -0.35
SHANK3-201ENST00000262795 VWC2LB2RUY7 222 aa12.86□□□□□ -0.35
SHANK3-201ENST00000262795 CD5P06127 495 aa12.86□□□□□ -0.35
SHANK3-201ENST00000262795 CFHR2P36980 270 aa12.86□□□□□ -0.35
SHANK3-201ENST00000262795 ATP5IP56385 69 aaPredicted RBP12.86□□□□□ -0.35
SHANK3-201ENST00000262795 RNF126Q9BV68 326 aa12.86□□□□□ -0.35
SHANK3-201ENST00000262795 NXPH4O95158 308 aa12.86□□□□□ -0.35
SHANK3-201ENST00000262795 DMRTC2Q8IXT2 367 aaPredicted RBP12.86□□□□□ -0.35
SHANK3-201ENST00000262795 IGHV4-30-2A0A087WSY4 118 aa12.86□□□□□ -0.35
SHANK3-201ENST00000262795 TRBV6-7A0A0A0MS04 114 aa12.86□□□□□ -0.35
SHANK3-201ENST00000262795 TRAV25A0A0B4J276 109 aa12.86□□□□□ -0.35
SHANK3-201ENST00000262795 FOXL1Q12952 345 aa12.86□□□□□ -0.35
SHANK3-201ENST00000262795 DEFB105AQ8NG35 78 aa12.86□□□□□ -0.35
SHANK3-201ENST00000262795 WFDC1Q9HC57 220 aa12.86□□□□□ -0.35
SHANK3-201ENST00000262795 RPL23P62829 140 aaKnown RBP12.85□□□□□ -0.35
SHANK3-201ENST00000262795 CCL20P78556 96 aa12.85□□□□□ -0.35
SHANK3-201ENST00000262795 HIST1H2BLQ99880 126 aa12.85□□□□□ -0.35
SHANK3-201ENST00000262795 PLXND1Q9Y4D7 1925 aa12.85□□□□□ -0.35
SHANK3-201ENST00000262795 RMI2Q96E14 147 aa12.85□□□□□ -0.35
SHANK3-201ENST00000262795 SPATA31B1PQ5VZV4 182 aa12.85□□□□□ -0.35
SHANK3-201ENST00000262795 CSTL1Q9H114 145 aa12.85□□□□□ -0.35
SHANK3-201ENST00000262795 MPDZO75970 2070 aa12.85□□□□□ -0.35
SHANK3-201ENST00000262795 GREB1LQ9C091 1923 aaPredicted RBP12.85□□□□□ -0.35
SHANK3-201ENST00000262795 IGKV1D-17A0A075B6S4 117 aa12.84□□□□□ -0.35
SHANK3-201ENST00000262795 LRCOL1A6NCL2 159 aa12.84□□□□□ -0.35
SHANK3-201ENST00000262795 PIFOQ8TCI5 191 aa12.84□□□□□ -0.35
SHANK3-201ENST00000262795 ZNF138P52744 262 aa12.84□□□□□ -0.35
SHANK3-201ENST00000262795 FAM186AA6NE01 2351 aa12.84□□□□□ -0.35
SHANK3-201ENST00000262795 IGLL5B9A064 214 aa12.84□□□□□ -0.35
SHANK3-201ENST00000262795 J3QLI3 93 aa12.84□□□□□ -0.35
SHANK3-201ENST00000262795 C9orf66Q5T8R8 295 aa12.84□□□□□ -0.35
SHANK3-201ENST00000262795 APRG1Q8IVJ8 170 aa12.84□□□□□ -0.35
SHANK3-201ENST00000262795 HIST3H2BBQ8N257 126 aa12.84□□□□□ -0.35
SHANK3-201ENST00000262795 SVIPQ8NHG7 77 aa12.84□□□□□ -0.35
SHANK3-201ENST00000262795 IGKV1D-12P01611 117 aa12.84□□□□□ -0.35
SHANK3-201ENST00000262795 PHF3Q92576 2039 aaKnown RBP12.84□□□□□ -0.35
SHANK3-201ENST00000262795 NOP10Q9NPE3 64 aaKnown RBP12.84□□□□□ -0.35
SHANK3-201ENST00000262795 SPXQ9BT56 116 aa12.83□□□□□ -0.35
SHANK3-201ENST00000262795 MED12Q93074 2177 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 GAGE2AQ6NT46 116 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 BOD1L2Q8IYS8 172 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 CEP250Q9BV73 2442 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 A0A1B0GTI1 187 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 A0A1B0GUS0 222 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 IGHV3-30P01768 117 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 IGHV3-33P01772 117 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 IGHV3-30-3P0DP02 117 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 IGHV3-30-5P0DP03 117 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 PSG3Q16557 428 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 MLANAQ16655 118 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 KLHDC3Q9BQ90 382 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 RALGAPA2Q2PPJ7 1873 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 IZUMO1RA6ND01 250 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 SH2D1AO60880 128 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 GHRHP01286 108 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 HGFACQ04756 655 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 TMEM170AQ8WVE7 144 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 VSIRQ9H7M9 311 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 KIAA2026Q5HYC2 2103 aa12.83□□□□□ -0.36
SHANK3-201ENST00000262795 GP9P14770 177 aa12.82□□□□□ -0.36
SHANK3-201ENST00000262795 SLURP1P55000 103 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms