RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 COL8A2P25067 703 aa11.62□□□□□ -0.55
CUX2-201ENST00000261726 NTF4P34130 210 aa11.62□□□□□ -0.55
CUX2-201ENST00000261726 ANXA2RQ3ZCQ2 193 aa11.62□□□□□ -0.55
CUX2-201ENST00000261726 PLSCR4Q9NRQ2 329 aa11.62□□□□□ -0.55
CUX2-201ENST00000261726 GREB1Q4ZG55 1949 aa11.62□□□□□ -0.55
CUX2-201ENST00000261726 LYPD2Q6UXB3 125 aa11.62□□□□□ -0.55
CUX2-201ENST00000261726 IL17RELQ6ZVW7 336 aa11.62□□□□□ -0.55
CUX2-201ENST00000261726 LINC01356Q8N9X3 169 aa11.62□□□□□ -0.55
CUX2-201ENST00000261726 H3BMM0 161 aa11.62□□□□□ -0.55
CUX2-201ENST00000261726 UBE2WQ96B02 151 aa11.62□□□□□ -0.55
CUX2-201ENST00000261726 GGNQ86UU5 652 aa11.62□□□□□ -0.55
CUX2-201ENST00000261726 AHCTF1Q8WYP5 2266 aa11.62□□□□□ -0.55
CUX2-201ENST00000261726 SOCS3O14543 225 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 SIGLEC9Q9Y336 463 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 CD5LO43866 347 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 IGLV3-19P01714 112 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 THAP8Q8NA92 274 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 BPESC1Q9GZL8 116 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 NXPH4O95158 308 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 TMEM242Q9NWH2 141 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 M0R1W7 72 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 MLANAQ16655 118 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 TRPT1Q86TN4 253 aaKnown RBP11.61□□□□□ -0.55
CUX2-201ENST00000261726 LINC00473A8K010 186 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 IGKV1-5P01602 117 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 SAA4P35542 130 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 C9orf153Q5TBE3 101 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 STPG4Q8N801 248 aa11.61□□□□□ -0.55
CUX2-201ENST00000261726 RNF223E7ERA6 249 aa11.6□□□□□ -0.55
CUX2-201ENST00000261726 SPINK13Q1W4C9 94 aa11.6□□□□□ -0.55
CUX2-201ENST00000261726 FBLN5Q9UBX5 448 aa11.6□□□□□ -0.55
CUX2-201ENST00000261726 TP53TG1Q9Y2A0 90 aa11.6□□□□□ -0.55
CUX2-201ENST00000261726 UTRNP46939 3433 aa11.6□□□□□ -0.55
CUX2-201ENST00000261726 IGLV3-32A0A0A0MS00 114 aa11.6□□□□□ -0.55
CUX2-201ENST00000261726 ARMS2P0C7Q2 107 aa11.6□□□□□ -0.55
CUX2-201ENST00000261726 ZFP36L1Q07352 338 aaKnown RBP11.6□□□□□ -0.55
CUX2-201ENST00000261726 DAZ1Q9NQZ3 744 aaKnown RBP11.6□□□□□ -0.55
CUX2-201ENST00000261726 RTTNQ86VV8 2226 aa11.6□□□□□ -0.55
CUX2-201ENST00000261726 TRBV24-1A0A075B6N3 115 aa11.6□□□□□ -0.55
CUX2-201ENST00000261726 RPP25LQ8N5L8 163 aaKnown RBP11.6□□□□□ -0.55
CUX2-201ENST00000261726 NDUFS5O43920 106 aa11.6□□□□□ -0.55
CUX2-201ENST00000261726 C1orf194Q5T5A4 169 aa11.6□□□□□ -0.55
CUX2-201ENST00000261726 C8orf49Q96NF6 230 aa11.6□□□□□ -0.55
CUX2-201ENST00000261726 NEUROG3Q9Y4Z2 214 aa11.6□□□□□ -0.55
CUX2-201ENST00000261726 IGHV3-38A0A0C4DH36 116 aa11.6□□□□□ -0.55
CUX2-201ENST00000261726 LYPD3O95274 346 aa11.59□□□□□ -0.55
CUX2-201ENST00000261726 CD59P13987 128 aa11.59□□□□□ -0.55
CUX2-201ENST00000261726 CSRP3P50461 194 aa11.59□□□□□ -0.55
CUX2-201ENST00000261726 SUPT4H1P63272 117 aaKnown RBP11.59□□□□□ -0.55
CUX2-201ENST00000261726 HAMPP81172 84 aa11.59□□□□□ -0.55
CUX2-201ENST00000261726 OOSP1A8MZH6 123 aa11.59□□□□□ -0.55
CUX2-201ENST00000261726 TRBV25-1A0A075B6N4 114 aa11.59□□□□□ -0.55
CUX2-201ENST00000261726 A0A096LPF7 62 aa11.59□□□□□ -0.55
CUX2-201ENST00000261726 NABP1Q96AH0 204 aa11.59□□□□□ -0.55
CUX2-201ENST00000261726 TRAV12-1A0A0B4J245 112 aa11.59□□□□□ -0.55
CUX2-201ENST00000261726 RNF5Q99942 180 aa11.59□□□□□ -0.55
CUX2-201ENST00000261726 COLCA2A8K830 154 aa11.58□□□□□ -0.55
CUX2-201ENST00000261726 MMP23AO75900 390 aa11.58□□□□□ -0.55
CUX2-201ENST00000261726 AZU1P20160 251 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 GAGE6Q13070 117 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 LINC00479Q96M42 142 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 CACNA1IQ9P0X4 2223 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 FNDC1Q4ZHG4 1894 aaPredicted RBP11.58□□□□□ -0.56
CUX2-201ENST00000261726 VWA8A3KMH1 1905 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 IL18BPO95998 194 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 FAM110DQ8TAY7 271 aaPredicted RBP11.58□□□□□ -0.56
CUX2-201ENST00000261726 PAX9P55771 341 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 GAGE12BA1L429 117 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 EFNA2O43921 213 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 GAGE7O76087 117 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 GAGE12FP0CL80 117 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 GAGE12GP0CL81 117 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 GAGE12IP0CL82 117 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 CFHR1Q03591 330 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 Q86TA4 180 aa11.58□□□□□ -0.56
CUX2-201ENST00000261726 TMEM213A2RRL7 107 aa11.57□□□□□ -0.56
CUX2-201ENST00000261726 DLEU1O43261 78 aa11.57□□□□□ -0.56
CUX2-201ENST00000261726 MORN5Q5VZ52 161 aa11.57□□□□□ -0.56
CUX2-201ENST00000261726 CYTL1Q9NRR1 136 aa11.57□□□□□ -0.56
CUX2-201ENST00000261726 SCRT2Q9NQ03 307 aa11.57□□□□□ -0.56
CUX2-201ENST00000261726 ZNRD1Q9P1U0 126 aa11.57□□□□□ -0.56
CUX2-201ENST00000261726 CFHR2P36980 270 aa11.57□□□□□ -0.56
CUX2-201ENST00000261726 KLF5Q13887 457 aaPredicted RBP11.57□□□□□ -0.56
CUX2-201ENST00000261726 FLVCR1-AS1Q8TAF5 88 aa11.57□□□□□ -0.56
CUX2-201ENST00000261726 CHD5Q8TDI0 1954 aa11.57□□□□□ -0.56
CUX2-201ENST00000261726 MBD3L4A6NDZ8 208 aaPredicted RBP11.57□□□□□ -0.56
CUX2-201ENST00000261726 MBD3L3A6NE82 208 aaPredicted RBP11.57□□□□□ -0.56
CUX2-201ENST00000261726 MBD3L5A6NJ08 208 aaPredicted RBP11.57□□□□□ -0.56
CUX2-201ENST00000261726 J3QRE1 110 aa11.57□□□□□ -0.56
CUX2-201ENST00000261726 CLPSL2Q6UWE3 100 aa11.57□□□□□ -0.56
CUX2-201ENST00000261726 HAPLN4Q86UW8 402 aa11.57□□□□□ -0.56
CUX2-201ENST00000261726 MBD3L2Q8NHZ7 208 aaPredicted RBP11.57□□□□□ -0.56
CUX2-201ENST00000261726 C5orf63A6NC05 138 aa11.56□□□□□ -0.56
CUX2-201ENST00000261726 IGHG3P01860 377 aa11.56□□□□□ -0.56
CUX2-201ENST00000261726 TCTEX1D4Q5JR98 221 aa11.56□□□□□ -0.56
CUX2-201ENST00000261726 LINC01619G3V211 115 aa11.56□□□□□ -0.56
CUX2-201ENST00000261726 hADV29S1A0JD25 119 aa11.56□□□□□ -0.56
CUX2-201ENST00000261726 EREGO14944 169 aa11.56□□□□□ -0.56
CUX2-201ENST00000261726 PRB1P04280 392 aa11.56□□□□□ -0.56
CUX2-201ENST00000261726 TAL2Q16559 108 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms