RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 IGHG4P01861 327 aa17.24■□□□□ 0.35
SIX3-201ENST00000260653 TCEAL7Q9BRU2 100 aa17.24■□□□□ 0.35
SIX3-201ENST00000260653 YAE1D1Q9NRH1 226 aa17.24■□□□□ 0.35
SIX3-201ENST00000260653 C5orf17Q8NAS9 161 aa17.24■□□□□ 0.35
SIX3-201ENST00000260653 IGF2BP2-AS1Q96M15 143 aa17.24■□□□□ 0.35
SIX3-201ENST00000260653 OTORQ9NRC9 128 aa17.24■□□□□ 0.35
SIX3-201ENST00000260653 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.23■□□□□ 0.35
SIX3-201ENST00000260653 H7BYZ3 331 aa17.23■□□□□ 0.35
SIX3-201ENST00000260653 PSMB8P28062 276 aa17.23■□□□□ 0.35
SIX3-201ENST00000260653 CNN1P51911 297 aaKnown RBP17.23■□□□□ 0.35
SIX3-201ENST00000260653 OR8I2Q8N0Y5 310 aa17.23■□□□□ 0.35
SIX3-201ENST00000260653 RNF24Q9Y225 148 aa17.23■□□□□ 0.35
SIX3-201ENST00000260653 ZNF207O43670 478 aaKnown RBP17.23■□□□□ 0.35
SIX3-201ENST00000260653 OR4X2Q8NGF9 303 aa17.23■□□□□ 0.35
SIX3-201ENST00000260653 CDC42EP3Q9UKI2 254 aa17.23■□□□□ 0.35
SIX3-201ENST00000260653 LY96Q9Y6Y9 160 aa17.23■□□□□ 0.35
SIX3-201ENST00000260653 ISLRO14498 428 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 CRYBA1P05813 215 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 ANAPC16Q96DE5 110 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 SFRP2Q96HF1 295 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 C2orf88Q9BSF0 95 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 A0A0G2JLM5 398 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 CXCL1P09341 107 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 RPL7P18124 248 aaKnown RBP17.22■□□□□ 0.35
SIX3-201ENST00000260653 SIGLEC15Q6ZMC9 328 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 TGIF2-C20orf24A0A0A6YYL0 155 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 IGLV2-8P01709 118 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 OR5I1Q13606 314 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 LBHQ53QV2 105 aaPredicted RBP17.21■□□□□ 0.35
SIX3-201ENST00000260653 TEX38Q6PEX7 206 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 SGK494Q96LW2 274 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 ATG101Q9BSB4 218 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 IGHV3OR16-13A0A075B7E8 117 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 IGHV3-74A0A0B4J1X5 117 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 IGHV3-66A0A0C4DH42 116 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 BUB3O43684 328 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 RAB5AP20339 215 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 BMI1P35226 326 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 NHLRC2Q8NBF2 726 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 ANK3Q12955 4377 aaKnown RBP17.21■□□□□ 0.35
SIX3-201ENST00000260653 IGHV3-49A0A0A0MS15 119 aa17.2■□□□□ 0.34
SIX3-201ENST00000260653 APOHP02749 345 aaPredicted RBP17.2■□□□□ 0.34
SIX3-201ENST00000260653 TCRAP04437 139 aa17.2■□□□□ 0.34
SIX3-201ENST00000260653 SMAD5-AS1Q9Y6J3 95 aa17.2■□□□□ 0.34
SIX3-201ENST00000260653 OR5B12Q96R08 314 aa17.2■□□□□ 0.34
SIX3-201ENST00000260653 METTL26Q96S19 204 aa17.2■□□□□ 0.34
SIX3-201ENST00000260653 OTOGQ6ZRI0 2925 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 CUBNO60494 3623 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 CD99P14209 185 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 S100A7P31151 101 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 UNQ9165/PRO28630Q6UXU0 137 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 PRB4P10163 310 aaPredicted RBP17.19■□□□□ 0.34
SIX3-201ENST00000260653 GALR1P47211 349 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 PDE6HQ13956 83 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 REC114Q7Z4M0 266 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 CMTM2Q8TAZ6 248 aa17.18■□□□□ 0.34
SIX3-201ENST00000260653 NF1P21359 2839 aa17.18■□□□□ 0.34
SIX3-201ENST00000260653 UBE2G1P62253 170 aa17.18■□□□□ 0.34
SIX3-201ENST00000260653 TMEM183BQ1AE95 376 aa17.18■□□□□ 0.34
SIX3-201ENST00000260653 LYPD1Q8N2G4 141 aa17.18■□□□□ 0.34
SIX3-201ENST00000260653 KLF12Q9Y4X4 402 aa17.18■□□□□ 0.34
SIX3-201ENST00000260653 PFN1P07737 140 aaKnown RBP17.17■□□□□ 0.34
SIX3-201ENST00000260653 MGST1P10620 155 aaKnown RBP17.17■□□□□ 0.34
SIX3-201ENST00000260653 TMEM86BQ8N661 226 aa17.17■□□□□ 0.34
SIX3-201ENST00000260653 DNAJC9-AS1A6NH13 148 aa17.17■□□□□ 0.34
SIX3-201ENST00000260653 NDUFA4O00483 81 aa17.17■□□□□ 0.34
SIX3-201ENST00000260653 RPLP1P05386 114 aaKnown RBP17.17■□□□□ 0.34
SIX3-201ENST00000260653 M0R3E3 92 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 FOLR2P14207 255 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 GOLT1AQ6ZVE7 132 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 BAGE2Q86Y30 109 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 Q8N2B8 174 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 OR10G8Q8NGN5 311 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 SMR3AQ99954 134 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 TMEM89A2RUT3 159 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 SLC35B1P78383 322 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 TRAV8-1A0A0A6YYK1 113 aa17.15■□□□□ 0.34
SIX3-201ENST00000260653 PPP1R2P9O14990 202 aa17.15■□□□□ 0.34
SIX3-201ENST00000260653 U3KQE9 123 aa17.15■□□□□ 0.34
SIX3-201ENST00000260653 GCGP01275 180 aa17.15■□□□□ 0.34
SIX3-201ENST00000260653 ERVFC1-1P60608 527 aa17.15■□□□□ 0.34
SIX3-201ENST00000260653 RNASE7Q9H1E1 156 aaKnown RBP17.15■□□□□ 0.34
SIX3-201ENST00000260653 SERTAD4Q9NUC0 356 aa17.15■□□□□ 0.34
SIX3-201ENST00000260653 PEF1Q9UBV8 284 aaKnown RBP17.15■□□□□ 0.34
SIX3-201ENST00000260653 FMC1Q96HJ9 113 aa17.14■□□□□ 0.33
SIX3-201ENST00000260653 AAMDCQ9H7C9 122 aa17.14■□□□□ 0.33
SIX3-201ENST00000260653 ESM1Q9NQ30 184 aa17.14■□□□□ 0.33
SIX3-201ENST00000260653 GGCTO75223 188 aaKnown RBP17.14■□□□□ 0.33
SIX3-201ENST00000260653 NUTF2P61970 127 aaKnown RBP17.14■□□□□ 0.33
SIX3-201ENST00000260653 SNRPEP62304 92 aaKnown RBP17.14■□□□□ 0.33
SIX3-201ENST00000260653 FAM181BA6NEQ2 426 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 RPS10P46783 165 aaKnown RBP17.13■□□□□ 0.33
SIX3-201ENST00000260653 FOXE3Q13461 319 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 C1orf194Q5T5A4 169 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 IGFL4Q6B9Z1 124 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 ZFP82Q8N141 532 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 FAM210BQ96KR6 192 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 HIVEP2P31629 2446 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 TRBV24-1A0A075B6N3 115 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 GPR82Q96P67 336 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms