RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 IFNA1P01562 189 aa15.58■□□□□ 0.09
RTCA-201ENST00000260563 SNRPCP09234 159 aaKnown RBP15.58■□□□□ 0.09
RTCA-201ENST00000260563 GALR1P47211 349 aa15.58■□□□□ 0.09
RTCA-201ENST00000260563 BEAN1Q3B7T3 259 aa15.58■□□□□ 0.09
RTCA-201ENST00000260563 SIGLEC15Q6ZMC9 328 aa15.58■□□□□ 0.09
RTCA-201ENST00000260563 RBPMS2Q6ZRY4 209 aaKnown RBP15.58■□□□□ 0.09
RTCA-201ENST00000260563 FAM210AQ96ND0 272 aa15.58■□□□□ 0.09
RTCA-201ENST00000260563 MANBALQ9NQG1 85 aa15.58■□□□□ 0.09
RTCA-201ENST00000260563 SMAD5-AS1Q9Y6J3 95 aa15.58■□□□□ 0.09
RTCA-201ENST00000260563 H3BQ15 152 aa15.58■□□□□ 0.08
RTCA-201ENST00000260563 NBEAP1P0C6P0 100 aa15.58■□□□□ 0.08
RTCA-201ENST00000260563 ATF4P18848 351 aaPredicted RBP15.58■□□□□ 0.08
RTCA-201ENST00000260563 COMMD7Q86VX2 200 aa15.58■□□□□ 0.08
RTCA-201ENST00000260563 TMEM61Q8N0U2 210 aa15.58■□□□□ 0.08
RTCA-201ENST00000260563 BLNKQ8WV28 456 aa15.58■□□□□ 0.08
RTCA-201ENST00000260563 ZNF586Q9NXT0 402 aa15.58■□□□□ 0.08
RTCA-201ENST00000260563 SORL1Q92673 2214 aa15.57■□□□□ 0.08
RTCA-201ENST00000260563 DNAH3Q8TD57 4116 aa15.57■□□□□ 0.08
RTCA-201ENST00000260563 IZUMO1RA6ND01 250 aa15.57■□□□□ 0.08
RTCA-201ENST00000260563 CD5P06127 495 aa15.57■□□□□ 0.08
RTCA-201ENST00000260563 UBE2G2P60604 165 aa15.57■□□□□ 0.08
RTCA-201ENST00000260563 HAGHQ16775 308 aa15.57■□□□□ 0.08
RTCA-201ENST00000260563 KPRPQ5T749 579 aaPredicted RBP15.57■□□□□ 0.08
RTCA-201ENST00000260563 TCF24Q7RTU0 167 aa15.57■□□□□ 0.08
RTCA-201ENST00000260563 TRAV25A0A0B4J276 109 aa15.56■□□□□ 0.08
RTCA-201ENST00000260563 RBFOX3A6NFN3 312 aa15.56■□□□□ 0.08
RTCA-201ENST00000260563 ZNF785A8K8V0 405 aa15.56■□□□□ 0.08
RTCA-201ENST00000260563 BCL2P10415 239 aa15.56■□□□□ 0.08
RTCA-201ENST00000260563 NDUFA5Q16718 116 aa15.56■□□□□ 0.08
RTCA-201ENST00000260563 GUK1Q16774 197 aa15.56■□□□□ 0.08
RTCA-201ENST00000260563 ZNF256Q9Y2P7 627 aaPredicted RBP15.56■□□□□ 0.08
RTCA-201ENST00000260563 TRBV19A0A075B6N1 114 aa15.55■□□□□ 0.08
RTCA-201ENST00000260563 A0A087X0K7 114 aa15.55■□□□□ 0.08
RTCA-201ENST00000260563 HELTA6NFD8 242 aa15.55■□□□□ 0.08
RTCA-201ENST00000260563 H3BTX0 84 aa15.55■□□□□ 0.08
RTCA-201ENST00000260563 PAGE4O60829 102 aa15.55■□□□□ 0.08
RTCA-201ENST00000260563 KRTAP10-11P60412 298 aa15.55■□□□□ 0.08
RTCA-201ENST00000260563 TOR2AQ5JU69 321 aa15.55■□□□□ 0.08
RTCA-201ENST00000260563 C17orf77Q96MU5 243 aa15.55■□□□□ 0.08
RTCA-201ENST00000260563 EIF5A2Q9GZV4 153 aaKnown RBP15.55■□□□□ 0.08
RTCA-201ENST00000260563 ARL2-SNX15V9GYD0 113 aa15.55■□□□□ 0.08
RTCA-201ENST00000260563 LOC102723971A0A1B0GUV8 181 aa15.54■□□□□ 0.08
RTCA-201ENST00000260563 RAB19A4D1S5 217 aa15.54■□□□□ 0.08
RTCA-201ENST00000260563 FAM74A7A6NL05 159 aa15.54■□□□□ 0.08
RTCA-201ENST00000260563 TSPAN4O14817 238 aa15.54■□□□□ 0.08
RTCA-201ENST00000260563 TAGLN2P37802 199 aaKnown RBP15.54■□□□□ 0.08
RTCA-201ENST00000260563 RPL11P62913 178 aaKnown RBP15.54■□□□□ 0.08
RTCA-201ENST00000260563 GUCA2BQ16661 112 aa15.54■□□□□ 0.08
RTCA-201ENST00000260563 RARRES2Q99969 163 aa15.54■□□□□ 0.08
RTCA-201ENST00000260563 YTHDF2Q9Y5A9 579 aaKnown RBP15.54■□□□□ 0.08
RTCA-201ENST00000260563 A0A1W2PRE2 83 aa15.53■□□□□ 0.08
RTCA-201ENST00000260563 PDE6HQ13956 83 aa15.53■□□□□ 0.08
RTCA-201ENST00000260563 ZNF506Q5JVG8 444 aa15.53■□□□□ 0.08
RTCA-201ENST00000260563 FAM90A2PQ658T7 463 aa15.53■□□□□ 0.08
RTCA-201ENST00000260563 VAX2Q9UIW0 290 aa15.53■□□□□ 0.08
RTCA-201ENST00000260563 NBEAL1Q6ZS30 2694 aa15.53■□□□□ 0.08
RTCA-201ENST00000260563 NOTCH1P46531 2555 aa15.53■□□□□ 0.08
RTCA-201ENST00000260563 IGKV3-7A0A075B6H7 116 aa15.53■□□□□ 0.08
RTCA-201ENST00000260563 MEOX2P50222 304 aa15.53■□□□□ 0.08
RTCA-201ENST00000260563 RANP62826 216 aaKnown RBP15.53■□□□□ 0.08
RTCA-201ENST00000260563 CST9LP1Q5W188 147 aa15.53■□□□□ 0.08
RTCA-201ENST00000260563 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.53■□□□□ 0.08
RTCA-201ENST00000260563 SPAG8Q99932 426 aaPredicted RBP15.53■□□□□ 0.08
RTCA-201ENST00000260563 SLC17A3O00476 420 aa15.52■□□□□ 0.07
RTCA-201ENST00000260563 NDUFB4O95168 129 aa15.52■□□□□ 0.07
RTCA-201ENST00000260563 SRSF3P84103 164 aaKnown RBP15.52■□□□□ 0.07
RTCA-201ENST00000260563 ICAM4Q14773 271 aa15.52■□□□□ 0.07
RTCA-201ENST00000260563 ZNF253O75346 499 aa15.51■□□□□ 0.07
RTCA-201ENST00000260563 ATP5G3P48201 142 aa15.51■□□□□ 0.07
RTCA-201ENST00000260563 PAFAH1B2P68402 229 aa15.51■□□□□ 0.07
RTCA-201ENST00000260563 MEF2BQ02080 365 aaPredicted RBP15.51■□□□□ 0.07
RTCA-201ENST00000260563 PEA15Q15121 130 aa15.51■□□□□ 0.07
RTCA-201ENST00000260563 SLC7A5P1Q8MH63 180 aa15.51■□□□□ 0.07
RTCA-201ENST00000260563 RXFP4Q8TDU9 374 aa15.51■□□□□ 0.07
RTCA-201ENST00000260563 PRR25Q96S07 402 aa15.51■□□□□ 0.07
RTCA-201ENST00000260563 NRN1Q9NPD7 142 aa15.51■□□□□ 0.07
RTCA-201ENST00000260563 C11orf94C9JXX5 98 aa15.5■□□□□ 0.07
RTCA-201ENST00000260563 PSG9Q00887 426 aa15.5■□□□□ 0.07
RTCA-201ENST00000260563 LYPD1Q8N2G4 141 aa15.5■□□□□ 0.07
RTCA-201ENST00000260563 EIF4E3Q8N5X7 224 aaKnown RBP15.5■□□□□ 0.07
RTCA-201ENST00000260563 TXNDC17Q9BRA2 123 aa15.5■□□□□ 0.07
RTCA-201ENST00000260563 NKX6-2Q9C056 277 aaPredicted RBP15.5■□□□□ 0.07
RTCA-201ENST00000260563 Q9H3A6 140 aa15.5■□□□□ 0.07
RTCA-201ENST00000260563 OR4C46A6NHA9 309 aa15.49■□□□□ 0.07
RTCA-201ENST00000260563 GGTLC3B5MD39 225 aa15.49■□□□□ 0.07
RTCA-201ENST00000260563 DNASE2O00115 360 aaPredicted RBP15.49■□□□□ 0.07
RTCA-201ENST00000260563 UQCC3Q6UW78 93 aa15.49■□□□□ 0.07
RTCA-201ENST00000260563 GTSCR1Q86UQ5 136 aa15.49■□□□□ 0.07
RTCA-201ENST00000260563 GBGT1Q8N5D6 347 aa15.49■□□□□ 0.07
RTCA-201ENST00000260563 SLC50A1Q9BRV3 221 aa15.49■□□□□ 0.07
RTCA-201ENST00000260563 MS4A6AQ9H2W1 248 aa15.49■□□□□ 0.07
RTCA-201ENST00000260563 SMDT1Q9H4I9 107 aa15.49■□□□□ 0.07
RTCA-201ENST00000260563 TFPI2P48307 235 aa15.48■□□□□ 0.07
RTCA-201ENST00000260563 CD81P60033 236 aa15.48■□□□□ 0.07
RTCA-201ENST00000260563 SUMO1P63165 101 aaKnown RBP15.48■□□□□ 0.07
RTCA-201ENST00000260563 EXOC3-AS1Q8N2X6 119 aa15.48■□□□□ 0.07
RTCA-201ENST00000260563 ZNF331Q9NQX6 463 aaPredicted RBP15.48■□□□□ 0.07
RTCA-201ENST00000260563 OTORQ9NRC9 128 aa15.48■□□□□ 0.07
RTCA-201ENST00000260563 PGPA6NDG6 321 aa15.48■□□□□ 0.07
RTCA-201ENST00000260563 CCDC28AQ8IWP9 274 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms