RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 BTF3L4Q96K17 158 aa12.8□□□□□ -0.36
SDCBP-201ENST00000260130 C21orf62Q9NYP8 219 aa12.8□□□□□ -0.36
SDCBP-201ENST00000260130 WDR83OSQ9Y284 106 aa12.8□□□□□ -0.36
SDCBP-201ENST00000260130 A0A1W2PPQ1 181 aa12.8□□□□□ -0.36
SDCBP-201ENST00000260130 XKRY2A2RUG3 117 aa12.8□□□□□ -0.36
SDCBP-201ENST00000260130 I3L2K1 104 aa12.8□□□□□ -0.36
SDCBP-201ENST00000260130 TYMSP04818 313 aa12.8□□□□□ -0.36
SDCBP-201ENST00000260130 GPR183P32249 361 aa12.8□□□□□ -0.36
SDCBP-201ENST00000260130 GPX4P36969 197 aaPredicted RBP12.8□□□□□ -0.36
SDCBP-201ENST00000260130 KRTAP10-11P60412 298 aa12.8□□□□□ -0.36
SDCBP-201ENST00000260130 OR9G4Q8NGQ1 327 aa12.8□□□□□ -0.36
SDCBP-201ENST00000260130 ATP6V0BQ99437 205 aa12.8□□□□□ -0.36
SDCBP-201ENST00000260130 MT-CO2P00403 227 aa12.79□□□□□ -0.36
SDCBP-201ENST00000260130 PRB2P02812 416 aaPredicted RBP12.79□□□□□ -0.36
SDCBP-201ENST00000260130 JOSD1Q15040 202 aaPredicted RBP12.79□□□□□ -0.36
SDCBP-201ENST00000260130 PVRIGQ6DKI7 326 aa12.79□□□□□ -0.36
SDCBP-201ENST00000260130 A0A1W2PPV4 95 aa12.79□□□□□ -0.36
SDCBP-201ENST00000260130 F6UZH7 168 aa12.79□□□□□ -0.36
SDCBP-201ENST00000260130 GPHB5Q86YW7 130 aa12.79□□□□□ -0.36
SDCBP-201ENST00000260130 TXNDC17Q9BRA2 123 aa12.79□□□□□ -0.36
SDCBP-201ENST00000260130 KCNIP2Q9NS61 270 aa12.79□□□□□ -0.36
SDCBP-201ENST00000260130 CORTO00230 105 aa12.78□□□□□ -0.36
SDCBP-201ENST00000260130 AMBPP02760 352 aa12.78□□□□□ -0.36
SDCBP-201ENST00000260130 ACTL10Q5JWF8 245 aa12.78□□□□□ -0.36
SDCBP-201ENST00000260130 OR2T8A6NH00 312 aa12.77□□□□□ -0.36
SDCBP-201ENST00000260130 DDTP30046 118 aa12.77□□□□□ -0.36
SDCBP-201ENST00000260130 MFAP4P55083 255 aa12.77□□□□□ -0.36
SDCBP-201ENST00000260130 REC114Q7Z4M0 266 aa12.77□□□□□ -0.36
SDCBP-201ENST00000260130 PEMTQ9UBM1 199 aa12.77□□□□□ -0.36
SDCBP-201ENST00000260130 F8W735 103 aaPredicted RBP12.77□□□□□ -0.37
SDCBP-201ENST00000260130 OPRK1P41145 380 aa12.77□□□□□ -0.37
SDCBP-201ENST00000260130 FAM106AQ4KMX7 169 aa12.77□□□□□ -0.37
SDCBP-201ENST00000260130 Q56UQ5 140 aa12.77□□□□□ -0.37
SDCBP-201ENST00000260130 SLC24A4Q8NFF2 622 aa12.77□□□□□ -0.37
SDCBP-201ENST00000260130 C14orf144Q96I85 54 aa12.77□□□□□ -0.37
SDCBP-201ENST00000260130 IMMP2LQ96T52 175 aa12.77□□□□□ -0.37
SDCBP-201ENST00000260130 TXN2Q99757 166 aa12.77□□□□□ -0.37
SDCBP-201ENST00000260130 AURKAIP1Q9NWT8 199 aaPredicted RBP12.77□□□□□ -0.37
SDCBP-201ENST00000260130 LGALS9O00182 355 aa12.76□□□□□ -0.37
SDCBP-201ENST00000260130 GCGP01275 180 aa12.76□□□□□ -0.37
SDCBP-201ENST00000260130 IGHV3-48P01763 117 aa12.76□□□□□ -0.37
SDCBP-201ENST00000260130 FCGR2BP31994 310 aaPredicted RBP12.76□□□□□ -0.37
SDCBP-201ENST00000260130 C2orf83Q53S99 150 aa12.76□□□□□ -0.37
SDCBP-201ENST00000260130 CST9LP1Q5W188 147 aa12.76□□□□□ -0.37
SDCBP-201ENST00000260130 NPPCP23582 126 aa12.76□□□□□ -0.37
SDCBP-201ENST00000260130 LINC01551Q86U37 167 aa12.76□□□□□ -0.37
SDCBP-201ENST00000260130 FUT9Q9Y231 359 aa12.76□□□□□ -0.37
SDCBP-201ENST00000260130 ZNF320A2RRD8 509 aa12.75□□□□□ -0.37
SDCBP-201ENST00000260130 CSN3P07498 182 aa12.75□□□□□ -0.37
SDCBP-201ENST00000260130 GZMBP10144 247 aa12.75□□□□□ -0.37
SDCBP-201ENST00000260130 TMEM37Q8WXS4 190 aa12.75□□□□□ -0.37
SDCBP-201ENST00000260130 TMEM18Q96B42 140 aa12.75□□□□□ -0.37
SDCBP-201ENST00000260130 CHRDL1Q9BU40 450 aa12.75□□□□□ -0.37
SDCBP-201ENST00000260130 SIGLEC8Q9NYZ4 499 aa12.75□□□□□ -0.37
SDCBP-201ENST00000260130 IGHV3-35A0A0C4DH35 117 aa12.74□□□□□ -0.37
SDCBP-201ENST00000260130 CTSGP08311 255 aa12.74□□□□□ -0.37
SDCBP-201ENST00000260130 NPY1RP25929 384 aa12.74□□□□□ -0.37
SDCBP-201ENST00000260130 PRO1933Q9H354 126 aa12.74□□□□□ -0.37
SDCBP-201ENST00000260130 ADMP35318 185 aa12.74□□□□□ -0.37
SDCBP-201ENST00000260130 UBE2G2P60604 165 aa12.74□□□□□ -0.37
SDCBP-201ENST00000260130 MLANAQ16655 118 aa12.74□□□□□ -0.37
SDCBP-201ENST00000260130 ZNF600Q6ZNG1 722 aa12.74□□□□□ -0.37
SDCBP-201ENST00000260130 FNDC4Q9H6D8 234 aaPredicted RBP12.74□□□□□ -0.37
SDCBP-201ENST00000260130 NDUFB4O95168 129 aa12.73□□□□□ -0.37
SDCBP-201ENST00000260130 CXorf1O96002 111 aa12.73□□□□□ -0.37
SDCBP-201ENST00000260130 IGLV1-51P01701 117 aa12.73□□□□□ -0.37
SDCBP-201ENST00000260130 ATP5G3P48201 142 aa12.73□□□□□ -0.37
SDCBP-201ENST00000260130 GCSAMLQ5JQS6 135 aa12.73□□□□□ -0.37
SDCBP-201ENST00000260130 FAM78BQ5VT40 261 aa12.73□□□□□ -0.37
SDCBP-201ENST00000260130 GNG7O60262 68 aa12.73□□□□□ -0.37
SDCBP-201ENST00000260130 CNN1P51911 297 aaKnown RBP12.73□□□□□ -0.37
SDCBP-201ENST00000260130 ATP5IP56385 69 aaPredicted RBP12.73□□□□□ -0.37
SDCBP-201ENST00000260130 UNQ9165/PRO28630Q6UXU0 137 aa12.73□□□□□ -0.37
SDCBP-201ENST00000260130 PXMP4Q9Y6I8 212 aa12.73□□□□□ -0.37
SDCBP-201ENST00000260130 C2orf70A6NJV1 201 aa12.72□□□□□ -0.37
SDCBP-201ENST00000260130 STAG3L2P0CL84 134 aa12.72□□□□□ -0.37
SDCBP-201ENST00000260130 STAG3L3P0CL85 134 aa12.72□□□□□ -0.37
SDCBP-201ENST00000260130 TMEM144Q7Z5S9 345 aa12.72□□□□□ -0.37
SDCBP-201ENST00000260130 ZNF256Q9Y2P7 627 aaPredicted RBP12.72□□□□□ -0.37
SDCBP-201ENST00000260130 WI2-2373I1.2A0A1W2PRP0 233 aa12.71□□□□□ -0.37
SDCBP-201ENST00000260130 A8MWP6 167 aa12.71□□□□□ -0.37
SDCBP-201ENST00000260130 PRSS46E5RG02 174 aa12.71□□□□□ -0.37
SDCBP-201ENST00000260130 ARL14EPLP0DKL9 152 aa12.71□□□□□ -0.37
SDCBP-201ENST00000260130 ADAMTSL5Q6ZMM2 481 aa12.71□□□□□ -0.37
SDCBP-201ENST00000260130 MGST2Q99735 147 aa12.71□□□□□ -0.37
SDCBP-201ENST00000260130 GGTLC1Q9BX51 225 aa12.71□□□□□ -0.37
SDCBP-201ENST00000260130 PRKDCP78527 4128 aaKnown RBP12.71□□□□□ -0.37
SDCBP-201ENST00000260130 NDUFA4O00483 81 aa12.71□□□□□ -0.37
SDCBP-201ENST00000260130 RELQ04864 619 aaPredicted RBP12.71□□□□□ -0.37
SDCBP-201ENST00000260130 SFRP2Q96HF1 295 aa12.71□□□□□ -0.37
SDCBP-201ENST00000260130 NPVFQ9HCQ7 196 aa12.71□□□□□ -0.37
SDCBP-201ENST00000260130 MRPL36Q9P0J6 103 aaKnown RBP12.71□□□□□ -0.37
SDCBP-201ENST00000260130 UFC1Q9Y3C8 167 aa12.71□□□□□ -0.37
SDCBP-201ENST00000260130 TRAPPC1Q9Y5R8 145 aa12.71□□□□□ -0.37
SDCBP-201ENST00000260130 TMEM213A2RRL7 107 aa12.7□□□□□ -0.38
SDCBP-201ENST00000260130 CBLN1P23435 193 aa12.7□□□□□ -0.38
SDCBP-201ENST00000260130 LBHQ53QV2 105 aaPredicted RBP12.7□□□□□ -0.38
SDCBP-201ENST00000260130 TM4SF20Q53R12 229 aa12.7□□□□□ -0.38
SDCBP-201ENST00000260130 TMEM190Q8WZ59 177 aa12.7□□□□□ -0.38
SDCBP-201ENST00000260130 DERL1Q9BUN8 251 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms