RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 ZNF319Q9P2F9 582 aa3.95□□□□□ -1.78
RC3H1-201ENST00000258349 SPRR3Q9UBC9 169 aa3.95□□□□□ -1.78
RC3H1-201ENST00000258349 ATP1A1-AS1Q5TC04 95 aa3.95□□□□□ -1.78
RC3H1-201ENST00000258349 C9orf106Q8NAJ2 232 aa3.95□□□□□ -1.78
RC3H1-201ENST00000258349 WDR83OSQ9Y284 106 aa3.95□□□□□ -1.78
RC3H1-201ENST00000258349 TRAV41A0A0B4J266 112 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 NPIPB5A8MRT5 1133 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 F8W1H4 67 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 H0YJW9 148 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 CD5LO43866 347 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 LYZL1Q6UWQ5 148 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 ZNF837Q96EG3 531 aaPredicted RBP3.94□□□□□ -1.78
RC3H1-201ENST00000258349 EPOPA6NHQ4 379 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 PRR32B1ATL7 298 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 SMAD7O15105 426 aaKnown RBP3.94□□□□□ -1.78
RC3H1-201ENST00000258349 PAX4O43316 350 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 PSG1P11464 419 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 Q0VG73 95 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 RCHY1Q96PM5 261 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 VSIRQ9H7M9 311 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 MUC6Q6W4X9 2439 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 QRFPP83859 136 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 LCN12Q6JVE5 192 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 FLVCR1-AS1Q8TAF5 88 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 NDUFS6O75380 124 aaKnown RBP3.94□□□□□ -1.78
RC3H1-201ENST00000258349 VMO1Q7Z5L0 202 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 CHCHD5Q9BSY4 110 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 IGKV1-27A0A075B6S5 117 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 C9orf118A6NHY6 69 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 IL18BPO95998 194 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 OCIAD2Q56VL3 154 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 IGHV3OR16-8A0A075B7F1 116 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 TIMM23O14925 209 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 TCRAP04437 139 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 SRSF2Q01130 221 aaKnown RBP3.94□□□□□ -1.78
RC3H1-201ENST00000258349 GGNQ86UU5 652 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 PNRC2Q9NPJ4 139 aaKnown RBP3.94□□□□□ -1.78
RC3H1-201ENST00000258349 A0A087WV48 116 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 IGHV1-18A0A0C4DH31 117 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 SRRM5B3KS81 715 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 LHFPL4Q7Z7J7 247 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 PPDPFLQ8WWR9 84 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 C20orf144Q9BQM9 153 aa3.94□□□□□ -1.78
RC3H1-201ENST00000258349 FAM231BA6NCW3 169 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 SRRM4A7MD48 611 aaKnown RBP3.93□□□□□ -1.78
RC3H1-201ENST00000258349 NCR2O95944 276 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 SPATA31B1PQ5VZV4 182 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 TMEM200BQ69YZ2 307 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 GAGE2AQ6NT46 116 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 SCRT1Q9BWW7 348 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 IGKV1D-8A0A087WSZ0 117 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 LOC102723996A0A087X1L8 192 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 A0A1B0GWJ7 208 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 IGHV1-8P0DP01 117 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 FAM201AQ5SY85 155 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 Q86TA4 180 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 TMEM14BQ9NUH8 114 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 ZNF492Q9P255 531 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 C10orf91Q5T1B1 145 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 IGHV1-3A0A0C4DH29 117 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 IGHV3-11P01762 117 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 IFITM1P13164 125 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 NABP1Q96AH0 204 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 A0A1W2PRX2 142 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 MMP23AO75900 390 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 CCL3L1P16619 93 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 NPC2P61916 151 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 FAM27E3Q08E93 113 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 C9orf139Q6ZV77 190 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 OR11H6Q8NGC7 330 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 TMEM158Q8WZ71 300 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 LRRK2Q5S007 2527 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 PCSK5Q92824 1860 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 RSPO4Q2I0M5 234 aaPredicted RBP3.93□□□□□ -1.78
RC3H1-201ENST00000258349 IGHV1-46P01743 117 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 PRTN3P24158 256 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 CSRP2Q16527 193 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 C5orf64Q2M2E5 130 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 TMEM256Q8N2U0 113 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 TMEM178BH3BS89 294 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 SS18Q15532 418 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 Q6P435 159 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 RPP25LQ8N5L8 163 aaKnown RBP3.93□□□□□ -1.78
RC3H1-201ENST00000258349 LSM4Q9Y4Z0 139 aaKnown RBP3.93□□□□□ -1.78
RC3H1-201ENST00000258349 SMIM27A0A1W2PRY6 76 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 CDKN1AP38936 164 aa3.93□□□□□ -1.78
RC3H1-201ENST00000258349 BUB1B-PAK6H3BSN5 160 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 IGKV1-5P01602 117 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 C3orf79P0CE67 100 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 ZNF474Q6S9Z5 364 aaPredicted RBP3.92□□□□□ -1.78
RC3H1-201ENST00000258349 C20orf204Q6ZNR8 217 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 C1QTNF4Q9BXJ3 329 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 PRSS46E5RG02 174 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 HTN3P15516 51 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 RPL36AP83881 106 aaKnown RBP3.92□□□□□ -1.78
RC3H1-201ENST00000258349 C3orf36Q3SXR2 165 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 TRPT1Q86TN4 253 aaKnown RBP3.92□□□□□ -1.78
RC3H1-201ENST00000258349 DMRTC2Q8IXT2 367 aaPredicted RBP3.92□□□□□ -1.78
RC3H1-201ENST00000258349 RPL36ALQ969Q0 106 aaKnown RBP3.92□□□□□ -1.78
RC3H1-201ENST00000258349 IGHG4P01861 327 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms