RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TMED6Q8WW62 240 aa10.51□□□□□ -0.73
VPS25-201ENST00000253794 RAB24Q969Q5 203 aa10.51□□□□□ -0.73
VPS25-201ENST00000253794 FXYD5Q96DB9 178 aa10.51□□□□□ -0.73
VPS25-201ENST00000253794 OR51M1Q9H341 326 aa10.51□□□□□ -0.73
VPS25-201ENST00000253794 MAP6D1Q9H9H5 199 aa10.51□□□□□ -0.73
VPS25-201ENST00000253794 TRBV19A0A075B6N1 114 aa10.5□□□□□ -0.73
VPS25-201ENST00000253794 A8MZ25 164 aa10.5□□□□□ -0.73
VPS25-201ENST00000253794 RAB5CP51148 216 aa10.5□□□□□ -0.73
VPS25-201ENST00000253794 CD81P60033 236 aa10.5□□□□□ -0.73
VPS25-201ENST00000253794 SSX7Q7RTT5 188 aa10.5□□□□□ -0.73
VPS25-201ENST00000253794 FAM24BQ8N5W8 94 aa10.5□□□□□ -0.73
VPS25-201ENST00000253794 SLC50A1Q9BRV3 221 aa10.5□□□□□ -0.73
VPS25-201ENST00000253794 PAXXQ9BUH6 204 aa10.5□□□□□ -0.73
VPS25-201ENST00000253794 ZNF586Q9NXT0 402 aa10.5□□□□□ -0.73
VPS25-201ENST00000253794 CLEC5AQ9NY25 188 aa10.5□□□□□ -0.73
VPS25-201ENST00000253794 BOLA1Q9Y3E2 137 aa10.5□□□□□ -0.73
VPS25-201ENST00000253794 TRAV8-2A0A0B4J237 113 aa10.49□□□□□ -0.73
VPS25-201ENST00000253794 OR11H12B2RN74 326 aa10.49□□□□□ -0.73
VPS25-201ENST00000253794 OR7C2O60412 319 aa10.49□□□□□ -0.73
VPS25-201ENST00000253794 PYYP10082 97 aa10.49□□□□□ -0.73
VPS25-201ENST00000253794 ID1P41134 155 aa10.49□□□□□ -0.73
VPS25-201ENST00000253794 TFPI2P48307 235 aa10.49□□□□□ -0.73
VPS25-201ENST00000253794 SULT1A2P50226 295 aa10.49□□□□□ -0.73
VPS25-201ENST00000253794 SNRPD3P62318 126 aaKnown RBP10.49□□□□□ -0.73
VPS25-201ENST00000253794 RNF141Q8WVD5 230 aa10.49□□□□□ -0.73
VPS25-201ENST00000253794 ZNF331Q9NQX6 463 aaPredicted RBP10.49□□□□□ -0.73
VPS25-201ENST00000253794 K7EIL1 84 aa10.48□□□□□ -0.73
VPS25-201ENST00000253794 NDUFB4O95168 129 aa10.48□□□□□ -0.73
VPS25-201ENST00000253794 NBEAP1P0C6P0 100 aa10.48□□□□□ -0.73
VPS25-201ENST00000253794 WFDC3Q8IUB2 231 aa10.48□□□□□ -0.73
VPS25-201ENST00000253794 MBD3L1Q8WWY6 194 aa10.48□□□□□ -0.73
VPS25-201ENST00000253794 C16orf92Q96LL3 132 aa10.48□□□□□ -0.73
VPS25-201ENST00000253794 SLC17A3O00476 420 aa10.47□□□□□ -0.73
VPS25-201ENST00000253794 CXorf1O96002 111 aa10.47□□□□□ -0.73
VPS25-201ENST00000253794 ZNF688P0C7X2 276 aa10.47□□□□□ -0.73
VPS25-201ENST00000253794 ARL14EPLP0DKL9 152 aa10.47□□□□□ -0.73
VPS25-201ENST00000253794 UBE2L3P68036 154 aaKnown RBP10.47□□□□□ -0.73
VPS25-201ENST00000253794 LYPD1Q8N2G4 141 aa10.47□□□□□ -0.73
VPS25-201ENST00000253794 TRAV1-1A0A0B4J248 108 aa10.46□□□□□ -0.73
VPS25-201ENST00000253794 OR10J4P0C629 311 aa10.46□□□□□ -0.73
VPS25-201ENST00000253794 FHITP49789 147 aa10.46□□□□□ -0.73
VPS25-201ENST00000253794 DEFB131AP59861 70 aa10.46□□□□□ -0.73
VPS25-201ENST00000253794 PSG9Q00887 426 aa10.46□□□□□ -0.73
VPS25-201ENST00000253794 MRPL53Q96EL3 112 aaKnown RBP10.46□□□□□ -0.73
VPS25-201ENST00000253794 TMEM167BQ9NRX6 74 aa10.46□□□□□ -0.73
VPS25-201ENST00000253794 UBQLN2Q9UHD9 624 aa10.46□□□□□ -0.73
VPS25-201ENST00000253794 MAP1LC3B2A6NCE7 125 aa10.45□□□□□ -0.74
VPS25-201ENST00000253794 HMGB3O15347 200 aaKnown RBP10.45□□□□□ -0.74
VPS25-201ENST00000253794 EIF3GO75821 320 aaKnown RBP eCLIP10.45□□□□□ -0.74
VPS25-201ENST00000253794 PRB2P02812 416 aaPredicted RBP10.45□□□□□ -0.74
VPS25-201ENST00000253794 GCHFRP30047 84 aa10.45□□□□□ -0.74
VPS25-201ENST00000253794 PSG3Q16557 428 aa10.45□□□□□ -0.74
VPS25-201ENST00000253794 PSMG4Q5JS54 123 aa10.45□□□□□ -0.74
VPS25-201ENST00000253794 LINC00322Q6ZN03 302 aaPredicted RBP10.45□□□□□ -0.74
VPS25-201ENST00000253794 FOXI2Q6ZQN5 318 aa10.45□□□□□ -0.74
VPS25-201ENST00000253794 DEFB125Q8N687 156 aa10.45□□□□□ -0.74
VPS25-201ENST00000253794 FAM213BQ8TBF2 198 aa10.45□□□□□ -0.74
VPS25-201ENST00000253794 C20orf173Q96LM9 149 aa10.45□□□□□ -0.74
VPS25-201ENST00000253794 CITED4Q96RK1 184 aa10.45□□□□□ -0.74
VPS25-201ENST00000253794 MAP1LC3BQ9GZQ8 125 aa10.45□□□□□ -0.74
VPS25-201ENST00000253794 WFDC10AQ9H1F0 79 aa10.45□□□□□ -0.74
VPS25-201ENST00000253794 PRKDCP78527 4128 aaKnown RBP10.44□□□□□ -0.74
VPS25-201ENST00000253794 H3BTX0 84 aa10.44□□□□□ -0.74
VPS25-201ENST00000253794 IGHV4-30-4P0DP06 118 aa10.44□□□□□ -0.74
VPS25-201ENST00000253794 ARL6IP6Q8N6S5 226 aa10.44□□□□□ -0.74
VPS25-201ENST00000253794 LRRC20Q8TCA0 184 aa10.44□□□□□ -0.74
VPS25-201ENST00000253794 CLUHP3Q96NS8 147 aa10.44□□□□□ -0.74
VPS25-201ENST00000253794 PRELID1Q9Y255 219 aa10.44□□□□□ -0.74
VPS25-201ENST00000253794 A8MTW9 85 aa10.43□□□□□ -0.74
VPS25-201ENST00000253794 SNRPCP09234 159 aaKnown RBP10.43□□□□□ -0.74
VPS25-201ENST00000253794 H2AFB1P0C5Y9 115 aa10.43□□□□□ -0.74
VPS25-201ENST00000253794 HLA-DRB4P13762 266 aa10.43□□□□□ -0.74
VPS25-201ENST00000253794 DEFA6Q01524 100 aa10.43□□□□□ -0.74
VPS25-201ENST00000253794 ALKAL2Q6UX46 152 aa10.43□□□□□ -0.74
VPS25-201ENST00000253794 APRG1Q8IVJ8 170 aa10.43□□□□□ -0.74
VPS25-201ENST00000253794 RNF182Q8N6D2 247 aa10.43□□□□□ -0.74
VPS25-201ENST00000253794 BLNKQ8WV28 456 aa10.43□□□□□ -0.74
VPS25-201ENST00000253794 SAV1Q9H4B6 383 aaPredicted RBP10.43□□□□□ -0.74
VPS25-201ENST00000253794 SRD5A3Q9H8P0 318 aa10.43□□□□□ -0.74
VPS25-201ENST00000253794 ARL2-SNX15V9GYD0 113 aa10.43□□□□□ -0.74
VPS25-201ENST00000253794 HLA-DRB4X5D2U9 266 aa10.43□□□□□ -0.74
VPS25-201ENST00000253794 A0A0J9YX75 114 aa10.42□□□□□ -0.74
VPS25-201ENST00000253794 A0A1W2PRE2 83 aa10.42□□□□□ -0.74
VPS25-201ENST00000253794 HLA-DMBP28068 263 aa10.42□□□□□ -0.74
VPS25-201ENST00000253794 PMS2P11Q13670 270 aa10.42□□□□□ -0.74
VPS25-201ENST00000253794 ZNF124Q15973 351 aa10.42□□□□□ -0.74
VPS25-201ENST00000253794 FAM74A1Q5RGS3 127 aa10.42□□□□□ -0.74
VPS25-201ENST00000253794 IGFL4Q6B9Z1 124 aa10.42□□□□□ -0.74
VPS25-201ENST00000253794 TEX261Q6UWH6 196 aa10.42□□□□□ -0.74
VPS25-201ENST00000253794 TRPT1Q86TN4 253 aaKnown RBP10.42□□□□□ -0.74
VPS25-201ENST00000253794 SFT2D1Q8WV19 159 aa10.42□□□□□ -0.74
VPS25-201ENST00000253794 LINC00052Q96N35 136 aa10.42□□□□□ -0.74
VPS25-201ENST00000253794 AAMDCQ9H7C9 122 aa10.42□□□□□ -0.74
VPS25-201ENST00000253794 OTORQ9NRC9 128 aa10.42□□□□□ -0.74
VPS25-201ENST00000253794 FGF8P55075 233 aaPredicted RBP10.41□□□□□ -0.74
VPS25-201ENST00000253794 LYPD6BQ8NI32 183 aa10.41□□□□□ -0.74
VPS25-201ENST00000253794 RPUSD4Q96CM3 377 aaKnown RBP10.41□□□□□ -0.74
VPS25-201ENST00000253794 Q9H3A6 140 aa10.41□□□□□ -0.74
VPS25-201ENST00000253794 TMPRSS5Q9H3S3 457 aa10.41□□□□□ -0.74
VPS25-201ENST00000253794 KIR2DL5BA0A0G2JN68 375 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms