RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 FANCD2OSQ96PS1 177 aa20.09■□□□□ 0.81
RAB40C-201ENST00000248139 RAXQ9Y2V3 346 aa20.09■□□□□ 0.81
RAB40C-201ENST00000248139 MAP1AP78559 2803 aaPredicted RBP20.08■□□□□ 0.81
RAB40C-201ENST00000248139 LOC105371242A0A075B767 164 aa20.08■□□□□ 0.81
RAB40C-201ENST00000248139 NPIPB6E9PJ23 425 aa20.08■□□□□ 0.81
RAB40C-201ENST00000248139 IGLL1P15814 213 aa20.08■□□□□ 0.81
RAB40C-201ENST00000248139 CT83Q5H943 113 aa20.08■□□□□ 0.81
RAB40C-201ENST00000248139 IGFL4Q6B9Z1 124 aa20.08■□□□□ 0.81
RAB40C-201ENST00000248139 PSG8Q9UQ74 426 aa20.08■□□□□ 0.81
RAB40C-201ENST00000248139 Q6ZVH6 145 aa20.08■□□□□ 0.8
RAB40C-201ENST00000248139 RAB1BQ9H0U4 201 aa20.08■□□□□ 0.8
RAB40C-201ENST00000248139 APOHP02749 345 aaPredicted RBP20.07■□□□□ 0.8
RAB40C-201ENST00000248139 ZNF414Q96IQ9 312 aa20.07■□□□□ 0.8
RAB40C-201ENST00000248139 LOC102724200A0A096LPH7 203 aaPredicted RBP20.07■□□□□ 0.8
RAB40C-201ENST00000248139 C5orf64Q2M2E5 130 aa20.07■□□□□ 0.8
RAB40C-201ENST00000248139 OR11H6Q8NGC7 330 aa20.07■□□□□ 0.8
RAB40C-201ENST00000248139 RNF5Q99942 180 aa20.06■□□□□ 0.8
RAB40C-201ENST00000248139 HOXB4P17483 251 aaPredicted RBP20.06■□□□□ 0.8
RAB40C-201ENST00000248139 HINT1P49773 126 aaPredicted RBP20.06■□□□□ 0.8
RAB40C-201ENST00000248139 MRPS12O15235 138 aaKnown RBP20.05■□□□□ 0.8
RAB40C-201ENST00000248139 F8W735 103 aaPredicted RBP20.05■□□□□ 0.8
RAB40C-201ENST00000248139 PMCHL2Q9BQD1 86 aa20.05■□□□□ 0.8
RAB40C-201ENST00000248139 HIVEP3Q5T1R4 2406 aa20.05■□□□□ 0.8
RAB40C-201ENST00000248139 OR2T8A6NH00 312 aa20.04■□□□□ 0.8
RAB40C-201ENST00000248139 LINC00614P0C842 121 aa20.04■□□□□ 0.8
RAB40C-201ENST00000248139 TIMD4Q96H15 378 aa20.04■□□□□ 0.8
RAB40C-201ENST00000248139 GFRA4Q9GZZ7 299 aa20.04■□□□□ 0.8
RAB40C-201ENST00000248139 LAMTOR2Q9Y2Q5 125 aa20.04■□□□□ 0.8
RAB40C-201ENST00000248139 NDUFA3O95167 84 aa20.03■□□□□ 0.8
RAB40C-201ENST00000248139 NDUFB8O95169 186 aa20.03■□□□□ 0.8
RAB40C-201ENST00000248139 ZFP36P26651 326 aaKnown RBP20.03■□□□□ 0.8
RAB40C-201ENST00000248139 TMEM70Q9BUB7 260 aa20.03■□□□□ 0.8
RAB40C-201ENST00000248139 TRAV9-2A0A087WT02 112 aa20.03■□□□□ 0.8
RAB40C-201ENST00000248139 DLEU1O43261 78 aa20.03■□□□□ 0.8
RAB40C-201ENST00000248139 PSG3Q16557 428 aa20.03■□□□□ 0.8
RAB40C-201ENST00000248139 VMO1Q7Z5L0 202 aa20.03■□□□□ 0.8
RAB40C-201ENST00000248139 A0A1W2PPR1 153 aa20.02■□□□□ 0.8
RAB40C-201ENST00000248139 hDV102S1A0JD36 115 aa20.02■□□□□ 0.8
RAB40C-201ENST00000248139 TSPOP30536 169 aa20.02■□□□□ 0.8
RAB40C-201ENST00000248139 FBXL19-AS1Q494R0 122 aa20.02■□□□□ 0.8
RAB40C-201ENST00000248139 NPBQ8NG41 125 aa20.02■□□□□ 0.8
RAB40C-201ENST00000248139 TMUB1Q9BVT8 246 aa20.02■□□□□ 0.8
RAB40C-201ENST00000248139 IGKV2-40A0A087WW87 121 aaPredicted RBP20.02■□□□□ 0.8
RAB40C-201ENST00000248139 LEPROTL1O95214 131 aa20.02■□□□□ 0.8
RAB40C-201ENST00000248139 IGKV2D-40P01614 121 aaPredicted RBP20.02■□□□□ 0.8
RAB40C-201ENST00000248139 CEACAM3P40198 252 aa20.02■□□□□ 0.8
RAB40C-201ENST00000248139 ARPC1AQ92747 370 aa20.02■□□□□ 0.8
RAB40C-201ENST00000248139 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.01■□□□□ 0.79
RAB40C-201ENST00000248139 WI2-2373I1.2A0A1W2PRP0 233 aa20.01■□□□□ 0.79
RAB40C-201ENST00000248139 PRTN3P24158 256 aa20.01■□□□□ 0.79
RAB40C-201ENST00000248139 IGLV11-55A0A075B6I3 123 aa20.01■□□□□ 0.79
RAB40C-201ENST00000248139 A0A1B0GUT8 65 aa20.01■□□□□ 0.79
RAB40C-201ENST00000248139 ODF3BA8MYP8 253 aa20.01■□□□□ 0.79
RAB40C-201ENST00000248139 HAX1O00165 279 aa20.01■□□□□ 0.79
RAB40C-201ENST00000248139 HLA-DMBP28068 263 aa20.01■□□□□ 0.79
RAB40C-201ENST00000248139 COL5A1-AS1Q5SY13 56 aa20.01■□□□□ 0.79
RAB40C-201ENST00000248139 KLHDC1Q8N7A1 406 aa20.01■□□□□ 0.79
RAB40C-201ENST00000248139 OR4C46A6NHA9 309 aa20■□□□□ 0.79
RAB40C-201ENST00000248139 TMEM75Q8N9X5 138 aa20■□□□□ 0.79
RAB40C-201ENST00000248139 C1RLQ9NZP8 487 aa20■□□□□ 0.79
RAB40C-201ENST00000248139 SOX21Q9Y651 276 aaPredicted RBP20■□□□□ 0.79
RAB40C-201ENST00000248139 MFAP4P55083 255 aa19.99■□□□□ 0.79
RAB40C-201ENST00000248139 C16orf54Q6UWD8 224 aa19.99■□□□□ 0.79
RAB40C-201ENST00000248139 SRSF8Q9BRL6 282 aaKnown RBP19.99■□□□□ 0.79
RAB40C-201ENST00000248139 Q8TAT8 98 aa19.99■□□□□ 0.79
RAB40C-201ENST00000248139 SYS1-DBNDD2H3BUS1 97 aa19.99■□□□□ 0.79
RAB40C-201ENST00000248139 MRPL52Q86TS9 123 aaKnown RBP19.99■□□□□ 0.79
RAB40C-201ENST00000248139 NDFIP1Q9BT67 221 aa19.99■□□□□ 0.79
RAB40C-201ENST00000248139 C21orf62Q9NYP8 219 aa19.99■□□□□ 0.79
RAB40C-201ENST00000248139 GOLT1BQ9Y3E0 138 aa19.99■□□□□ 0.79
RAB40C-201ENST00000248139 ZNF562Q6V9R5 426 aa19.98■□□□□ 0.79
RAB40C-201ENST00000248139 FAM106CPP0CH98 169 aa19.98■□□□□ 0.79
RAB40C-201ENST00000248139 FAM106AQ4KMX7 169 aa19.98■□□□□ 0.79
RAB40C-201ENST00000248139 C11orf71Q6IPW1 123 aa19.98■□□□□ 0.79
RAB40C-201ENST00000248139 ZFP30Q9Y2G7 519 aa19.98■□□□□ 0.79
RAB40C-201ENST00000248139 SERTM2A0A1B0GWG4 89 aa19.97■□□□□ 0.79
RAB40C-201ENST00000248139 K7EQM0 130 aa19.97■□□□□ 0.79
RAB40C-201ENST00000248139 TMEM213A2RRL7 107 aa19.97■□□□□ 0.79
RAB40C-201ENST00000248139 FAM231BA6NCW3 169 aa19.97■□□□□ 0.79
RAB40C-201ENST00000248139 CHCHD1Q96BP2 118 aaKnown RBP19.96■□□□□ 0.79
RAB40C-201ENST00000248139 LOC389332A0A1B0GUA5 103 aa19.95■□□□□ 0.78
RAB40C-201ENST00000248139 M0R1W7 72 aa19.95■□□□□ 0.78
RAB40C-201ENST00000248139 FXYD7P58549 80 aa19.95■□□□□ 0.78
RAB40C-201ENST00000248139 UNQ5815/PRO19632Q6UWF5 114 aa19.95■□□□□ 0.78
RAB40C-201ENST00000248139 AAMDCQ9H7C9 122 aa19.95■□□□□ 0.78
RAB40C-201ENST00000248139 TMEM11P17152 192 aa19.95■□□□□ 0.78
RAB40C-201ENST00000248139 EGR2P11161 476 aaPredicted RBP19.94■□□□□ 0.78
RAB40C-201ENST00000248139 LYZL1Q6UWQ5 148 aa19.94■□□□□ 0.78
RAB40C-201ENST00000248139 IGHV3-66A0A0C4DH42 116 aa19.93■□□□□ 0.78
RAB40C-201ENST00000248139 CTSGP08311 255 aa19.93■□□□□ 0.78
RAB40C-201ENST00000248139 NEU4Q8WWR8 484 aaPredicted RBP19.93■□□□□ 0.78
RAB40C-201ENST00000248139 IGHV3OR16-13A0A075B7E8 117 aa19.93■□□□□ 0.78
RAB40C-201ENST00000248139 IGHV3-74A0A0B4J1X5 117 aa19.93■□□□□ 0.78
RAB40C-201ENST00000248139 NPIPB5A8MRT5 1133 aa19.93■□□□□ 0.78
RAB40C-201ENST00000248139 CT45A10P0DMU9 189 aa19.93■□□□□ 0.78
RAB40C-201ENST00000248139 LOXL1Q08397 574 aaPredicted RBP19.93■□□□□ 0.78
RAB40C-201ENST00000248139 RIGQ13278 110 aa19.93■□□□□ 0.78
RAB40C-201ENST00000248139 VGLL1Q99990 258 aa19.93■□□□□ 0.78
RAB40C-201ENST00000248139 SMAD5-AS1Q9Y6J3 95 aa19.93■□□□□ 0.78
RAB40C-201ENST00000248139 SH2D1AO60880 128 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms