RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 IFITM10A6NMD0 228 aa18.02■□□□□ 0.48
MSX2-201ENST00000239243 CBLN1P23435 193 aa18.02■□□□□ 0.48
MSX2-201ENST00000239243 PPIFP30405 207 aaKnown RBP18.02■□□□□ 0.48
MSX2-201ENST00000239243 IER3P46695 156 aa18.02■□□□□ 0.48
MSX2-201ENST00000239243 TPPP2P59282 170 aa18.02■□□□□ 0.48
MSX2-201ENST00000239243 GFI1BQ5VTD9 330 aa18.02■□□□□ 0.48
MSX2-201ENST00000239243 PRNTQ86SH4 94 aa18.02■□□□□ 0.48
MSX2-201ENST00000239243 NAT8BQ9UHF3 227 aa18.02■□□□□ 0.48
MSX2-201ENST00000239243 TRAV8-1A0A0A6YYK1 113 aa18.02■□□□□ 0.47
MSX2-201ENST00000239243 PSG3Q16557 428 aa18.02■□□□□ 0.47
MSX2-201ENST00000239243 MRPL18Q9H0U6 180 aaKnown RBP18.02■□□□□ 0.47
MSX2-201ENST00000239243 ZNF580Q9UK33 172 aa18.02■□□□□ 0.47
MSX2-201ENST00000239243 VPS13CQ709C8 3753 aa18.01■□□□□ 0.47
MSX2-201ENST00000239243 SNURFLB1AK76 121 aa18.01■□□□□ 0.47
MSX2-201ENST00000239243 BUB3O43684 328 aa18.01■□□□□ 0.47
MSX2-201ENST00000239243 CA1P00915 261 aaPredicted RBP18.01■□□□□ 0.47
MSX2-201ENST00000239243 P01737 135 aa18.01■□□□□ 0.47
MSX2-201ENST00000239243 C1orf194Q5T5A4 169 aa18.01■□□□□ 0.47
MSX2-201ENST00000239243 RASL11AQ6T310 242 aa18.01■□□□□ 0.47
MSX2-201ENST00000239243 METTL26Q96S19 204 aa18.01■□□□□ 0.47
MSX2-201ENST00000239243 PRSS22Q9GZN4 317 aa18.01■□□□□ 0.47
MSX2-201ENST00000239243 RPP21Q9H633 154 aaKnown RBP18.01■□□□□ 0.47
MSX2-201ENST00000239243 SVEP1Q4LDE5 3571 aa18.01■□□□□ 0.47
MSX2-201ENST00000239243 C19orf71A6NCJ1 209 aa18■□□□□ 0.47
MSX2-201ENST00000239243 IGHV4-31P0DP07 118 aa18■□□□□ 0.47
MSX2-201ENST00000239243 DEFB112Q30KQ8 113 aa18■□□□□ 0.47
MSX2-201ENST00000239243 FBLL1A6NHQ2 334 aaKnown RBP18■□□□□ 0.47
MSX2-201ENST00000239243 BLCAPP62952 87 aa18■□□□□ 0.47
MSX2-201ENST00000239243 PDZD11Q5EBL8 140 aa18■□□□□ 0.47
MSX2-201ENST00000239243 MAPK1IP1LQ8NDC0 245 aa18■□□□□ 0.47
MSX2-201ENST00000239243 PSG8Q9UQ74 426 aa18■□□□□ 0.47
MSX2-201ENST00000239243 A0A087X0K7 114 aa17.99■□□□□ 0.47
MSX2-201ENST00000239243 OR5R1Q8NH85 324 aa17.99■□□□□ 0.47
MSX2-201ENST00000239243 A8MWL6 223 aa17.99■□□□□ 0.47
MSX2-201ENST00000239243 M0R3E3 92 aa17.99■□□□□ 0.47
MSX2-201ENST00000239243 PRSS57Q6UWY2 283 aa17.99■□□□□ 0.47
MSX2-201ENST00000239243 SMAD5-AS1Q9Y6J3 95 aa17.99■□□□□ 0.47
MSX2-201ENST00000239243 FBN2P35556 2912 aa17.98■□□□□ 0.47
MSX2-201ENST00000239243 IGHV3OR16-8A0A075B7F1 116 aa17.98■□□□□ 0.47
MSX2-201ENST00000239243 CLPSL1A2RUU4 121 aa17.98■□□□□ 0.47
MSX2-201ENST00000239243 OR4B1Q8NGF8 309 aa17.98■□□□□ 0.47
MSX2-201ENST00000239243 NOL4LQ96MY1 436 aaPredicted RBP17.98■□□□□ 0.47
MSX2-201ENST00000239243 ZNF331Q9NQX6 463 aaPredicted RBP17.98■□□□□ 0.47
MSX2-201ENST00000239243 SPINK4O60575 86 aa17.98■□□□□ 0.47
MSX2-201ENST00000239243 HLA-DQA1P01909 254 aa17.98■□□□□ 0.47
MSX2-201ENST00000239243 ARL3P36405 182 aa17.98■□□□□ 0.47
MSX2-201ENST00000239243 GBGT1Q8N5D6 347 aa17.98■□□□□ 0.47
MSX2-201ENST00000239243 SLC35B1P78383 322 aa17.97■□□□□ 0.47
MSX2-201ENST00000239243 LINC00322Q6ZN03 302 aaPredicted RBP17.97■□□□□ 0.47
MSX2-201ENST00000239243 WIPF2Q8TF74 440 aaPredicted RBP17.97■□□□□ 0.47
MSX2-201ENST00000239243 NEU1Q99519 415 aa17.97■□□□□ 0.47
MSX2-201ENST00000239243 A0A0G2JLM5 398 aa17.96■□□□□ 0.47
MSX2-201ENST00000239243 ZNF785A8K8V0 405 aa17.96■□□□□ 0.47
MSX2-201ENST00000239243 FSHBP01225 129 aa17.96■□□□□ 0.47
MSX2-201ENST00000239243 MRPL54Q6P161 138 aaKnown RBP17.96■□□□□ 0.47
MSX2-201ENST00000239243 C9orf139Q6ZV77 190 aa17.96■□□□□ 0.47
MSX2-201ENST00000239243 CIARTQ8N365 385 aaPredicted RBP17.96■□□□□ 0.47
MSX2-201ENST00000239243 NUP35Q8NFH5 326 aa17.96■□□□□ 0.47
MSX2-201ENST00000239243 GFRA4Q9GZZ7 299 aa17.96■□□□□ 0.47
MSX2-201ENST00000239243 CSMD1Q96PZ7 3565 aa17.96■□□□□ 0.47
MSX2-201ENST00000239243 FAM231BA6NCW3 169 aa17.96■□□□□ 0.47
MSX2-201ENST00000239243 NPIPB6E9PJ23 425 aa17.96■□□□□ 0.47
MSX2-201ENST00000239243 IGHV4-59P01825 116 aa17.96■□□□□ 0.47
MSX2-201ENST00000239243 FABP4P15090 132 aa17.96■□□□□ 0.47
MSX2-201ENST00000239243 TMEM136Q6ZRR5 245 aa17.96■□□□□ 0.47
MSX2-201ENST00000239243 ATP5L2Q7Z4Y8 100 aa17.96■□□□□ 0.47
MSX2-201ENST00000239243 HIGD1CA8MV81 97 aa17.95■□□□□ 0.46
MSX2-201ENST00000239243 PF4V1P10720 104 aa17.95■□□□□ 0.46
MSX2-201ENST00000239243 OR10D4PQ8NGN7 298 aa17.95■□□□□ 0.46
MSX2-201ENST00000239243 HIST1H2BLQ99880 126 aa17.95■□□□□ 0.46
MSX2-201ENST00000239243 SLC50A1Q9BRV3 221 aa17.95■□□□□ 0.46
MSX2-201ENST00000239243 CELSR2Q9HCU4 2923 aa17.95■□□□□ 0.46
MSX2-201ENST00000239243 IGLV1-40P01703 118 aa17.95■□□□□ 0.46
MSX2-201ENST00000239243 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.94■□□□□ 0.46
MSX2-201ENST00000239243 RAB4BP61018 213 aa17.94■□□□□ 0.46
MSX2-201ENST00000239243 Q96MF0 132 aa17.94■□□□□ 0.46
MSX2-201ENST00000239243 U3KQE9 123 aa17.94■□□□□ 0.46
MSX2-201ENST00000239243 NDUFA4O00483 81 aa17.94■□□□□ 0.46
MSX2-201ENST00000239243 FRMD6-AS1P0C7T7 363 aa17.94■□□□□ 0.46
MSX2-201ENST00000239243 PTPN13Q12923 2485 aa17.93■□□□□ 0.46
MSX2-201ENST00000239243 CRISP2P16562 243 aa17.93■□□□□ 0.46
MSX2-201ENST00000239243 CFHR3Q02985 330 aa17.93■□□□□ 0.46
MSX2-201ENST00000239243 PACRGQ96M98 296 aaPredicted RBP17.93■□□□□ 0.46
MSX2-201ENST00000239243 CHEK1O14757 476 aa17.92■□□□□ 0.46
MSX2-201ENST00000239243 CT45A10P0DMU9 189 aa17.92■□□□□ 0.46
MSX2-201ENST00000239243 Q6ZS46 218 aa17.92■□□□□ 0.46
MSX2-201ENST00000239243 ZC2HC1AQ96GY0 325 aa17.92■□□□□ 0.46
MSX2-201ENST00000239243 USP9YO00507 2555 aaPredicted RBP17.92■□□□□ 0.46
MSX2-201ENST00000239243 CR1P17927 2039 aa17.92■□□□□ 0.46
MSX2-201ENST00000239243 SAPCD1Q5SSQ6 148 aa17.92■□□□□ 0.46
MSX2-201ENST00000239243 C16orf54Q6UWD8 224 aa17.91■□□□□ 0.46
MSX2-201ENST00000239243 TMEM18Q96B42 140 aa17.91■□□□□ 0.46
MSX2-201ENST00000239243 FAM209BQ5JX69 171 aa17.91■□□□□ 0.46
MSX2-201ENST00000239243 CYB5R2Q6BCY4 276 aa17.91■□□□□ 0.46
MSX2-201ENST00000239243 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.91■□□□□ 0.46
MSX2-201ENST00000239243 VPREB3Q9UKI3 123 aa17.91■□□□□ 0.46
MSX2-201ENST00000239243 AMBPP02760 352 aa17.9■□□□□ 0.46
MSX2-201ENST00000239243 OR2D3Q8NGH3 330 aa17.9■□□□□ 0.46
MSX2-201ENST00000239243 KLK15Q9H2R5 256 aa17.9■□□□□ 0.46
MSX2-201ENST00000239243 POLQO75417 2590 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms