RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 RPL23P62829 140 aaKnown RBP10.18□□□□□ -0.78
SLIRP-201ENST00000238688 ZNF674Q2M3X9 581 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 RNF212Q495C1 297 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 TOMM20LQ6UXN7 152 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 CLEC19AQ6UXS0 136 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 LINC01551Q86U37 167 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 ZNF329Q86UD4 541 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 MYOZ3Q8TDC0 251 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 ZNF702PQ9H963 129 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 KLF12Q9Y4X4 402 aa10.18□□□□□ -0.78
SLIRP-201ENST00000238688 A0A1B0GUS0 222 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 A0A1W2PS18 150 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 CLPSL1A2RUU4 121 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 SH2D7A6NKC9 451 aaPredicted RBP10.17□□□□□ -0.78
SLIRP-201ENST00000238688 MRPS12O15235 138 aaKnown RBP10.17□□□□□ -0.78
SLIRP-201ENST00000238688 GGCTO75223 188 aaKnown RBP10.17□□□□□ -0.78
SLIRP-201ENST00000238688 RPL35P42766 123 aaKnown RBP10.17□□□□□ -0.78
SLIRP-201ENST00000238688 GALR1P47211 349 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 GNG4P50150 75 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 ADIRFQ15847 76 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 TMEM183BQ1AE95 376 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 LINC01006Q8NI28 216 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 GRAMD2BQ96HH9 432 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 FMC1Q96HJ9 113 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 MS4A10Q96PG2 267 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 CITED1Q99966 193 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 AAMDCQ9H7C9 122 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 EPDR1Q9UM22 224 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 U3KQE9 123 aa10.17□□□□□ -0.78
SLIRP-201ENST00000238688 TRAV9-1A0A075B6T8 112 aa10.16□□□□□ -0.78
SLIRP-201ENST00000238688 K7EMT4 169 aa10.16□□□□□ -0.78
SLIRP-201ENST00000238688 BUB3O43684 328 aa10.16□□□□□ -0.78
SLIRP-201ENST00000238688 FOLR2P14207 255 aa10.16□□□□□ -0.78
SLIRP-201ENST00000238688 PROK1P58294 105 aa10.16□□□□□ -0.78
SLIRP-201ENST00000238688 Q6ZSV7 163 aa10.16□□□□□ -0.78
SLIRP-201ENST00000238688 OR8I2Q8N0Y5 310 aa10.16□□□□□ -0.78
SLIRP-201ENST00000238688 CMTM2Q8TAZ6 248 aa10.16□□□□□ -0.78
SLIRP-201ENST00000238688 UBE2E2Q96LR5 201 aa10.16□□□□□ -0.78
SLIRP-201ENST00000238688 NOL4LQ96MY1 436 aaPredicted RBP10.16□□□□□ -0.78
SLIRP-201ENST00000238688 SLC50A1Q9BRV3 221 aa10.16□□□□□ -0.78
SLIRP-201ENST00000238688 Q9H3A6 140 aa10.16□□□□□ -0.78
SLIRP-201ENST00000238688 H7BYZ3 331 aa10.15□□□□□ -0.78
SLIRP-201ENST00000238688 SLC25A5P05141 298 aaKnown RBP10.15□□□□□ -0.78
SLIRP-201ENST00000238688 CRYBA1P05813 215 aa10.15□□□□□ -0.78
SLIRP-201ENST00000238688 ATF4P18848 351 aaPredicted RBP10.15□□□□□ -0.78
SLIRP-201ENST00000238688 S100PP25815 95 aa10.15□□□□□ -0.78
SLIRP-201ENST00000238688 CSN1S1P47710 185 aa10.15□□□□□ -0.78
SLIRP-201ENST00000238688 RANP62826 216 aaKnown RBP10.15□□□□□ -0.78
SLIRP-201ENST00000238688 RPL19P84098 196 aaKnown RBP10.15□□□□□ -0.78
SLIRP-201ENST00000238688 KIAA0141Q14154 515 aaPredicted RBP10.15□□□□□ -0.78
SLIRP-201ENST00000238688 FAM106AQ4KMX7 169 aa10.15□□□□□ -0.78
SLIRP-201ENST00000238688 GPHB5Q86YW7 130 aa10.15□□□□□ -0.78
SLIRP-201ENST00000238688 CBLN2Q8IUK8 224 aa10.15□□□□□ -0.78
SLIRP-201ENST00000238688 ISOC2Q96AB3 205 aa10.15□□□□□ -0.78
SLIRP-201ENST00000238688 MRPL53Q96EL3 112 aaKnown RBP10.15□□□□□ -0.78
SLIRP-201ENST00000238688 ZNF414Q96IQ9 312 aa10.15□□□□□ -0.78
SLIRP-201ENST00000238688 OR5B12Q96R08 314 aa10.15□□□□□ -0.78
SLIRP-201ENST00000238688 C20orf24Q9BUV8 137 aa10.15□□□□□ -0.78
SLIRP-201ENST00000238688 GNB4Q9HAV0 340 aa10.15□□□□□ -0.78
SLIRP-201ENST00000238688 ZNF586Q9NXT0 402 aa10.15□□□□□ -0.78
SLIRP-201ENST00000238688 PEF1Q9UBV8 284 aaKnown RBP10.15□□□□□ -0.78
SLIRP-201ENST00000238688 PGPA6NDG6 321 aa10.14□□□□□ -0.79
SLIRP-201ENST00000238688 TCRAP04437 139 aa10.14□□□□□ -0.79
SLIRP-201ENST00000238688 UBE2G1P62253 170 aa10.14□□□□□ -0.79
SLIRP-201ENST00000238688 TMEM88Q6PEY1 159 aa10.14□□□□□ -0.79
SLIRP-201ENST00000238688 KCNIP4Q6PIL6 250 aa10.14□□□□□ -0.79
SLIRP-201ENST00000238688 SIGLEC15Q6ZMC9 328 aa10.14□□□□□ -0.79
SLIRP-201ENST00000238688 OR4X2Q8NGF9 303 aa10.14□□□□□ -0.79
SLIRP-201ENST00000238688 RNF114Q9Y508 228 aa10.14□□□□□ -0.79
SLIRP-201ENST00000238688 S4R3C0 116 aa10.14□□□□□ -0.79
SLIRP-201ENST00000238688 TRBV20OR9-2A0A075B6H5 130 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 TRBV24-1A0A075B6N3 115 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 COLCA2A8K830 154 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 ISLRO14498 428 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 IGHV3-23P01764 117 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 CENPWQ5EE01 88 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 TMEM75Q8N9X5 138 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 BLNKQ8WV28 456 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 SFRP2Q96HF1 295 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 IGF2BP2-AS1Q96M15 143 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 DERL1Q9BUN8 251 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 C16orf95Q9H693 158 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 DAZ1Q9NQZ3 744 aaKnown RBP10.13□□□□□ -0.79
SLIRP-201ENST00000238688 OSTCQ9NRP0 149 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 LINC00527Q9UJ94 153 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 ZFP30Q9Y2G7 519 aa10.13□□□□□ -0.79
SLIRP-201ENST00000238688 GCGP01275 180 aa10.12□□□□□ -0.79
SLIRP-201ENST00000238688 LGALS1P09382 135 aaKnown RBP10.12□□□□□ -0.79
SLIRP-201ENST00000238688 LEMD1Q68G75 181 aa10.12□□□□□ -0.79
SLIRP-201ENST00000238688 Q6ZS46 218 aa10.12□□□□□ -0.79
SLIRP-201ENST00000238688 FAM231DQ6ZW35 169 aa10.12□□□□□ -0.79
SLIRP-201ENST00000238688 UFC1Q9Y3C8 167 aa10.12□□□□□ -0.79
SLIRP-201ENST00000238688 PRKDCP78527 4128 aaKnown RBP10.12□□□□□ -0.79
SLIRP-201ENST00000238688 RBAKDNA6NC62 111 aa10.11□□□□□ -0.79
SLIRP-201ENST00000238688 LGALS9O00182 355 aa10.11□□□□□ -0.79
SLIRP-201ENST00000238688 CDX1P47902 265 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-201ENST00000238688 REC114Q7Z4M0 266 aa10.11□□□□□ -0.79
SLIRP-201ENST00000238688 C1QL4Q86Z23 238 aa10.11□□□□□ -0.79
SLIRP-201ENST00000238688 OCC1Q8TAD7 63 aa10.11□□□□□ -0.79
SLIRP-201ENST00000238688 YPEL4Q96NS1 127 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms