RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 ID1P41134 155 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 MEOX2P50222 304 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 CMC4P56277 68 aaPredicted RBP7.58□□□□□ -1.2
HMGCL-201ENST00000235958 CD81P60033 236 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 GUK1Q16774 197 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 IGFL4Q6B9Z1 124 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 PQLC2Q6ZP29 291 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 SSX7Q7RTT5 188 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 LRRC20Q8TCA0 184 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 BLNKQ8WV28 456 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 FXYD5Q96DB9 178 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 C16orf92Q96LL3 132 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 C19orf73Q9NVV2 129 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 UBQLN2Q9UHD9 624 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 TRBV19A0A075B6N1 114 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 OR11H12B2RN74 326 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 ISLRO14498 428 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 SOCS3O14543 225 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 CXorf1O96002 111 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 ZNF688P0C7X2 276 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 ARL14EPLP0DKL9 152 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 SULT1A2P50226 295 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 RAB5CP51148 216 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 DEFB131AP59861 70 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 SNRPD3P62318 126 aaKnown RBP7.57□□□□□ -1.2
HMGCL-201ENST00000235958 KHDC3LQ587J8 217 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 FAM74A1Q5RGS3 127 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 LCN15Q6UWW0 184 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 ALKAL2Q6UX46 152 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 DPPA3Q6W0C5 159 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 GTSCR1Q86UQ5 136 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 FAM213BQ8TBF2 198 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 SFT2D1Q8WV19 159 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 MBD3L1Q8WWY6 194 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 PHYHIPLQ96FC7 376 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 LINC00052Q96N35 136 aa7.57□□□□□ -1.2
HMGCL-201ENST00000235958 TRAV8-2A0A0B4J237 113 aa7.56□□□□□ -1.2
HMGCL-201ENST00000235958 NDUFB4O95168 129 aa7.56□□□□□ -1.2
HMGCL-201ENST00000235958 H2AFB1P0C5Y9 115 aa7.56□□□□□ -1.2
HMGCL-201ENST00000235958 GCHFRP30047 84 aa7.56□□□□□ -1.2
HMGCL-201ENST00000235958 PSMB3P49720 205 aa7.56□□□□□ -1.2
HMGCL-201ENST00000235958 FGF8P55075 233 aaPredicted RBP7.56□□□□□ -1.2
HMGCL-201ENST00000235958 RANP62826 216 aaKnown RBP7.56□□□□□ -1.2
HMGCL-201ENST00000235958 ODF3L2Q3SX64 289 aa7.56□□□□□ -1.2
HMGCL-201ENST00000235958 PSMG4Q5JS54 123 aa7.56□□□□□ -1.2
HMGCL-201ENST00000235958 SAMD13Q5VXD3 122 aa7.56□□□□□ -1.2
HMGCL-201ENST00000235958 APRG1Q8IVJ8 170 aa7.56□□□□□ -1.2
HMGCL-201ENST00000235958 DEFB125Q8N687 156 aa7.56□□□□□ -1.2
HMGCL-201ENST00000235958 C20orf173Q96LM9 149 aa7.56□□□□□ -1.2
HMGCL-201ENST00000235958 FAM110AQ9BQ89 295 aa7.56□□□□□ -1.2
HMGCL-201ENST00000235958 TMPRSS5Q9H3S3 457 aa7.56□□□□□ -1.2
HMGCL-201ENST00000235958 ZNF331Q9NQX6 463 aaPredicted RBP7.56□□□□□ -1.2
HMGCL-201ENST00000235958 AURKAIP1Q9NWT8 199 aaPredicted RBP7.56□□□□□ -1.2
HMGCL-201ENST00000235958 MAP1LC3B2A6NCE7 125 aa7.55□□□□□ -1.2
HMGCL-201ENST00000235958 SLC17A3O00476 420 aa7.55□□□□□ -1.2
HMGCL-201ENST00000235958 ZNF253O75346 499 aa7.55□□□□□ -1.2
HMGCL-201ENST00000235958 HLA-DMBP28068 263 aa7.55□□□□□ -1.2
HMGCL-201ENST00000235958 UBE2L3P68036 154 aaKnown RBP7.55□□□□□ -1.2
HMGCL-201ENST00000235958 PDE6HQ13956 83 aa7.55□□□□□ -1.2
HMGCL-201ENST00000235958 ZNF124Q15973 351 aa7.55□□□□□ -1.2
HMGCL-201ENST00000235958 PSG3Q16557 428 aa7.55□□□□□ -1.2
HMGCL-201ENST00000235958 TEX261Q6UWH6 196 aa7.55□□□□□ -1.2
HMGCL-201ENST00000235958 RNF182Q8N6D2 247 aa7.55□□□□□ -1.2
HMGCL-201ENST00000235958 SUN5Q8TC36 379 aa7.55□□□□□ -1.2
HMGCL-201ENST00000235958 SLC50A1Q9BRV3 221 aa7.55□□□□□ -1.2
HMGCL-201ENST00000235958 MAP1LC3BQ9GZQ8 125 aa7.55□□□□□ -1.2
HMGCL-201ENST00000235958 WFDC10AQ9H1F0 79 aa7.55□□□□□ -1.2
HMGCL-201ENST00000235958 MAP6D1Q9H9H5 199 aa7.55□□□□□ -1.2
HMGCL-201ENST00000235958 ZNF705EA8MWA4 302 aaPredicted RBP7.54□□□□□ -1.2
HMGCL-201ENST00000235958 K7EIL1 84 aa7.54□□□□□ -1.2
HMGCL-201ENST00000235958 DEFB1P60022 68 aa7.54□□□□□ -1.2
HMGCL-201ENST00000235958 PSG9Q00887 426 aa7.54□□□□□ -1.2
HMGCL-201ENST00000235958 DEFA6Q01524 100 aa7.54□□□□□ -1.2
HMGCL-201ENST00000235958 ICAM4Q14773 271 aa7.54□□□□□ -1.2
HMGCL-201ENST00000235958 DEFB121Q5J5C9 76 aa7.54□□□□□ -1.2
HMGCL-201ENST00000235958 IQCF2Q8IXL9 164 aa7.54□□□□□ -1.2
HMGCL-201ENST00000235958 EXOC3-AS1Q8N2X6 119 aa7.54□□□□□ -1.2
HMGCL-201ENST00000235958 ZNF680Q8NEM1 530 aa7.54□□□□□ -1.2
HMGCL-201ENST00000235958 CITED4Q96RK1 184 aa7.54□□□□□ -1.2
HMGCL-201ENST00000235958 TUBA4BQ9H853 241 aa7.54□□□□□ -1.2
HMGCL-201ENST00000235958 TMEM167BQ9NRX6 74 aa7.54□□□□□ -1.2
HMGCL-201ENST00000235958 TRAV1-1A0A0B4J248 108 aa7.53□□□□□ -1.2
HMGCL-201ENST00000235958 A0A1B0GV50 99 aa7.53□□□□□ -1.2
HMGCL-201ENST00000235958 KNCNA6PVL3 124 aa7.53□□□□□ -1.2
HMGCL-201ENST00000235958 ZNF705FA8MVS1 300 aaPredicted RBP7.53□□□□□ -1.2
HMGCL-201ENST00000235958 PRB4P10163 310 aaPredicted RBP7.53□□□□□ -1.2
HMGCL-201ENST00000235958 CCL20P78556 96 aa7.53□□□□□ -1.2
HMGCL-201ENST00000235958 LYPD1Q8N2G4 141 aa7.53□□□□□ -1.2
HMGCL-201ENST00000235958 AAMDCQ9H7C9 122 aa7.53□□□□□ -1.2
HMGCL-201ENST00000235958 CLEC5AQ9NY25 188 aa7.53□□□□□ -1.2
HMGCL-201ENST00000235958 RBMY1BA6NDE4 496 aaKnown RBP7.52□□□□□ -1.21
HMGCL-201ENST00000235958 PGPA6NDG6 321 aa7.52□□□□□ -1.21
HMGCL-201ENST00000235958 RBMY1EA6NEQ0 496 aaKnown RBP7.52□□□□□ -1.21
HMGCL-201ENST00000235958 F6UB75 175 aa7.52□□□□□ -1.21
HMGCL-201ENST00000235958 M0R3E3 92 aa7.52□□□□□ -1.21
HMGCL-201ENST00000235958 IFNA7P01567 189 aa7.52□□□□□ -1.21
HMGCL-201ENST00000235958 RBMY1DP0C7P1 496 aaKnown RBP7.52□□□□□ -1.21
HMGCL-201ENST00000235958 IGHV4-30-4P0DP06 118 aa7.52□□□□□ -1.21
HMGCL-201ENST00000235958 SUMO1P63165 101 aaKnown RBP7.52□□□□□ -1.21
HMGCL-201ENST00000235958 BLOC1S1P78537 153 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms