RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 SIGLEC15Q6ZMC9 328 aa13.95□□□□□ -0.18
VIM-201ENST00000224237 CMTM2Q8TAZ6 248 aa13.95□□□□□ -0.18
VIM-201ENST00000224237 AURKAIP1Q9NWT8 199 aaPredicted RBP13.95□□□□□ -0.18
VIM-201ENST00000224237 CXCL1P09341 107 aa13.95□□□□□ -0.18
VIM-201ENST00000224237 CD99P14209 185 aa13.95□□□□□ -0.18
VIM-201ENST00000224237 EXOC3-AS1Q8N2X6 119 aa13.95□□□□□ -0.18
VIM-201ENST00000224237 RNF152Q8N8N0 203 aa13.95□□□□□ -0.18
VIM-201ENST00000224237 IGF2BP2-AS1Q96M15 143 aa13.95□□□□□ -0.18
VIM-201ENST00000224237 SERTAD4Q9NUC0 356 aa13.95□□□□□ -0.18
VIM-201ENST00000224237 TRBV24-1A0A075B6N3 115 aa13.94□□□□□ -0.18
VIM-201ENST00000224237 FAM181BA6NEQ2 426 aa13.94□□□□□ -0.18
VIM-201ENST00000224237 SLC17A3O00476 420 aa13.94□□□□□ -0.18
VIM-201ENST00000224237 TCRAP04437 139 aa13.94□□□□□ -0.18
VIM-201ENST00000224237 RPLP1P05386 114 aaKnown RBP13.94□□□□□ -0.18
VIM-201ENST00000224237 Q71RC1 249 aaPredicted RBP13.94□□□□□ -0.18
VIM-201ENST00000224237 MYOZ3Q8TDC0 251 aa13.94□□□□□ -0.18
VIM-201ENST00000224237 RPH3ALQ9UNE2 315 aa13.94□□□□□ -0.18
VIM-201ENST00000224237 U3KQE9 123 aa13.94□□□□□ -0.18
VIM-201ENST00000224237 NF1P21359 2839 aa13.94□□□□□ -0.18
VIM-201ENST00000224237 HIVEP1P15822 2718 aa13.94□□□□□ -0.18
VIM-201ENST00000224237 H7BYZ3 331 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 ZNF253O75346 499 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 UBE2G1P62253 170 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 PSG9Q00887 426 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 TMEM183BQ1AE95 376 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 LINC00518Q8N0U6 118 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 SFRP2Q96HF1 295 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 LINC00479Q96M42 142 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 AAMDCQ9H7C9 122 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 TGIF2-C20orf24A0A0A6YYL0 155 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 PPP1R2P9O14990 202 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 ZNF207O43670 478 aaKnown RBP13.93□□□□□ -0.18
VIM-201ENST00000224237 S100A9P06702 114 aaKnown RBP13.93□□□□□ -0.18
VIM-201ENST00000224237 SRD5A1P18405 259 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 GALR1P47211 349 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 UNQ9165/PRO28630Q6UXU0 137 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 KLF12Q9Y4X4 402 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 SMAD5-AS1Q9Y6J3 95 aa13.93□□□□□ -0.18
VIM-201ENST00000224237 A0A087X0K7 114 aa13.92□□□□□ -0.18
VIM-201ENST00000224237 K7EN84 100 aa13.92□□□□□ -0.18
VIM-201ENST00000224237 UBE2CO00762 179 aa13.92□□□□□ -0.18
VIM-201ENST00000224237 FMC1Q96HJ9 113 aa13.92□□□□□ -0.18
VIM-201ENST00000224237 FAM210BQ96KR6 192 aa13.92□□□□□ -0.18
VIM-201ENST00000224237 UBE2E2Q96LR5 201 aa13.92□□□□□ -0.18
VIM-201ENST00000224237 OR5B12Q96R08 314 aa13.92□□□□□ -0.18
VIM-201ENST00000224237 ISLRO14498 428 aa13.91□□□□□ -0.18
VIM-201ENST00000224237 APOHP02749 345 aaPredicted RBP13.91□□□□□ -0.18
VIM-201ENST00000224237 AKR1D1P51857 326 aa13.91□□□□□ -0.18
VIM-201ENST00000224237 Q6ZSV7 163 aa13.91□□□□□ -0.18
VIM-201ENST00000224237 TRAV34A0A0B4J273 112 aa13.91□□□□□ -0.18
VIM-201ENST00000224237 IGHV3-66A0A0C4DH42 116 aa13.91□□□□□ -0.18
VIM-201ENST00000224237 PFN1P07737 140 aaKnown RBP13.91□□□□□ -0.18
VIM-201ENST00000224237 KLHDC1Q8N7A1 406 aa13.91□□□□□ -0.18
VIM-201ENST00000224237 ZNF418Q8TF45 676 aaPredicted RBP13.91□□□□□ -0.18
VIM-201ENST00000224237 SMIM12Q96EX1 92 aa13.91□□□□□ -0.18
VIM-201ENST00000224237 BAHCC1Q9P281 2608 aa13.91□□□□□ -0.18
VIM-201ENST00000224237 ZNF785A8K8V0 405 aa13.9□□□□□ -0.18
VIM-201ENST00000224237 IGLV2-8P01709 118 aa13.9□□□□□ -0.18
VIM-201ENST00000224237 RNASE1P07998 156 aaKnown RBP13.9□□□□□ -0.18
VIM-201ENST00000224237 LGALS1P09382 135 aaKnown RBP13.9□□□□□ -0.18
VIM-201ENST00000224237 S100PP25815 95 aa13.9□□□□□ -0.18
VIM-201ENST00000224237 MEOX2P50222 304 aa13.9□□□□□ -0.18
VIM-201ENST00000224237 BAGE2Q86Y30 109 aa13.9□□□□□ -0.18
VIM-201ENST00000224237 IGHV3OR16-13A0A075B7E8 117 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 IGHV3-49A0A0A0MS15 119 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 IGHV3-74A0A0B4J1X5 117 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 ZNF320A2RRD8 509 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 GCGP01275 180 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 FAM106AQ4KMX7 169 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 C16orf54Q6UWD8 224 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 GPHB5Q86YW7 130 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 PYGO2Q9BRQ0 406 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 A0A1W2PS18 150 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 K7EQM0 130 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 GOLT1AQ6ZVE7 132 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 ARL6IP6Q8N6S5 226 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 OR10G8Q8NGN5 311 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 GRAMD2BQ96HH9 432 aa13.89□□□□□ -0.19
VIM-201ENST00000224237 ZNF331Q9NQX6 463 aaPredicted RBP13.89□□□□□ -0.19
VIM-201ENST00000224237 DAZ1Q9NQZ3 744 aaKnown RBP13.89□□□□□ -0.19
VIM-201ENST00000224237 MGST1P10620 155 aaKnown RBP13.88□□□□□ -0.19
VIM-201ENST00000224237 CSN1S1P47710 185 aa13.88□□□□□ -0.19
VIM-201ENST00000224237 FABP9Q0Z7S8 132 aa13.88□□□□□ -0.19
VIM-201ENST00000224237 RPEL1Q2QD12 228 aa13.88□□□□□ -0.19
VIM-201ENST00000224237 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.88□□□□□ -0.19
VIM-201ENST00000224237 TMEM75Q8N9X5 138 aa13.88□□□□□ -0.19
VIM-201ENST00000224237 GLMPQ8WWB7 406 aa13.88□□□□□ -0.19
VIM-201ENST00000224237 SLC50A1Q9BRV3 221 aa13.88□□□□□ -0.19
VIM-201ENST00000224237 SERTM2A0A1B0GWG4 89 aa13.87□□□□□ -0.19
VIM-201ENST00000224237 DIRC3C9JPN6 131 aa13.87□□□□□ -0.19
VIM-201ENST00000224237 M0R3E3 92 aa13.87□□□□□ -0.19
VIM-201ENST00000224237 HILS1P60008 231 aa13.87□□□□□ -0.19
VIM-201ENST00000224237 ERVFC1-1P60608 527 aa13.87□□□□□ -0.19
VIM-201ENST00000224237 OR5I1Q13606 314 aa13.87□□□□□ -0.19
VIM-201ENST00000224237 NSD1Q96L73 2696 aaPredicted RBP13.87□□□□□ -0.19
VIM-201ENST00000224237 SETXQ7Z333 2677 aaKnown RBP13.87□□□□□ -0.19
VIM-201ENST00000224237 K7EMT4 169 aa13.87□□□□□ -0.19
VIM-201ENST00000224237 LTAP01374 205 aa13.87□□□□□ -0.19
VIM-201ENST00000224237 S100A8P05109 93 aa13.87□□□□□ -0.19
VIM-201ENST00000224237 NHLRC2Q8NBF2 726 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms