RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 PTPRZ1P23471 2315 aaPredicted RBP10.91□□□□□ -0.66
GABPB1-201ENST00000220429 DSCAMO60469 2012 aa10.91□□□□□ -0.66
GABPB1-201ENST00000220429 M0R1B8 84 aa10.91□□□□□ -0.66
GABPB1-201ENST00000220429 WIPF1O43516 503 aa10.91□□□□□ -0.66
GABPB1-201ENST00000220429 LTAP01374 205 aa10.91□□□□□ -0.66
GABPB1-201ENST00000220429 IFITM1P13164 125 aa10.91□□□□□ -0.66
GABPB1-201ENST00000220429 RPL30P62888 115 aaKnown RBP10.91□□□□□ -0.66
GABPB1-201ENST00000220429 CACNG7P62955 275 aa10.91□□□□□ -0.66
GABPB1-201ENST00000220429 OR5AN1Q8NGI8 311 aa10.91□□□□□ -0.66
GABPB1-201ENST00000220429 PPDPFLQ8WWR9 84 aa10.91□□□□□ -0.66
GABPB1-201ENST00000220429 PRRG2O14669 202 aa10.91□□□□□ -0.66
GABPB1-201ENST00000220429 FAM159AQ6UWV7 190 aa10.91□□□□□ -0.66
GABPB1-201ENST00000220429 H2BFWTQ7Z2G1 175 aa10.91□□□□□ -0.66
GABPB1-201ENST00000220429 FCN3O75636 299 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 RRN3P1Q2M238 152 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 C12orf74Q32Q52 190 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 SPRNQ5BIV9 151 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 ABHD12Q8N2K0 398 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 HSD17B10Q99714 261 aaKnown RBP10.9□□□□□ -0.66
GABPB1-201ENST00000220429 DCTN5Q9BTE1 182 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 LSM4Q9Y4Z0 139 aaKnown RBP10.9□□□□□ -0.66
GABPB1-201ENST00000220429 SOX21Q9Y651 276 aaPredicted RBP10.9□□□□□ -0.66
GABPB1-201ENST00000220429 APC2O95996 2303 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 IGHV3-43A0A0B4J1X8 118 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 IGHV3-43DP0DP04 118 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 HCFC1P51610 2035 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 BRWD1-AS2P59051 145 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 MEIG1Q5JSS6 88 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 RFESDQ8TAC1 157 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 C1orf159Q96HA4 380 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 RAB9BQ9NP90 201 aa10.9□□□□□ -0.66
GABPB1-201ENST00000220429 DSCAML1Q8TD84 2053 aa10.89□□□□□ -0.67
GABPB1-201ENST00000220429 PIEZO2Q9H5I5 2752 aa10.89□□□□□ -0.67
GABPB1-201ENST00000220429 SRRM5B3KS81 715 aa10.89□□□□□ -0.67
GABPB1-201ENST00000220429 PRDX2P32119 198 aa10.89□□□□□ -0.67
GABPB1-201ENST00000220429 CARD19Q96LW7 228 aa10.89□□□□□ -0.67
GABPB1-201ENST00000220429 PCNX1Q96RV3 2341 aa10.89□□□□□ -0.67
GABPB1-201ENST00000220429 IGKV1D-17A0A075B6S4 117 aa10.89□□□□□ -0.67
GABPB1-201ENST00000220429 TMEM262E9PQX1 116 aa10.89□□□□□ -0.67
GABPB1-201ENST00000220429 IGHV3-13P01766 116 aa10.89□□□□□ -0.67
GABPB1-201ENST00000220429 MZT1Q08AG7 82 aa10.89□□□□□ -0.67
GABPB1-201ENST00000220429 TMEM126AQ9H061 195 aa10.89□□□□□ -0.67
GABPB1-201ENST00000220429 TCF19Q9Y242 345 aa10.89□□□□□ -0.67
GABPB1-201ENST00000220429 C15orf65H3BRN8 121 aa10.88□□□□□ -0.67
GABPB1-201ENST00000220429 NBL1P41271 181 aa10.88□□□□□ -0.67
GABPB1-201ENST00000220429 EDDM3AQ14507 147 aa10.88□□□□□ -0.67
GABPB1-201ENST00000220429 ZNF503Q96F45 646 aa10.88□□□□□ -0.67
GABPB1-201ENST00000220429 PGLYRP4Q96LB8 373 aa10.88□□□□□ -0.67
GABPB1-201ENST00000220429 TANC2Q9HCD6 1990 aa10.88□□□□□ -0.67
GABPB1-201ENST00000220429 C17orf98A8MV24 154 aa10.88□□□□□ -0.67
GABPB1-201ENST00000220429 DEFB108AA8MXU0 73 aa10.88□□□□□ -0.67
GABPB1-201ENST00000220429 PRSS46E5RG02 174 aa10.88□□□□□ -0.67
GABPB1-201ENST00000220429 ZNF688P0C7X2 276 aa10.88□□□□□ -0.67
GABPB1-201ENST00000220429 GLRXP35754 106 aa10.88□□□□□ -0.67
GABPB1-201ENST00000220429 C22orf34Q6ZV56 151 aa10.88□□□□□ -0.67
GABPB1-201ENST00000220429 PRSS3P2Q8NHM4 247 aa10.88□□□□□ -0.67
GABPB1-201ENST00000220429 AJUBAQ96IF1 538 aa10.88□□□□□ -0.67
GABPB1-201ENST00000220429 LINC00205P59089 165 aa10.87□□□□□ -0.67
GABPB1-201ENST00000220429 IGHV3OR15-7A0A075B7D8 119 aa10.87□□□□□ -0.67
GABPB1-201ENST00000220429 SRSF1Q07955 248 aaKnown RBP eCLIP10.87□□□□□ -0.67
GABPB1-201ENST00000220429 RPEQ96AT9 228 aa10.87□□□□□ -0.67
GABPB1-201ENST00000220429 ZNF414Q96IQ9 312 aa10.87□□□□□ -0.67
GABPB1-201ENST00000220429 CITED2Q99967 270 aaPredicted RBP10.87□□□□□ -0.67
GABPB1-201ENST00000220429 ADGRG4Q8IZF6 3080 aa10.87□□□□□ -0.67
GABPB1-201ENST00000220429 TRBV25-1A0A075B6N4 114 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 SMIM9A6NGZ8 99 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 LINC00473A8K010 186 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 FAM27E3Q08E93 113 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 OR9G1Q8NH87 305 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 DAZAP1Q96EP5 407 aaKnown RBP10.86□□□□□ -0.67
GABPB1-201ENST00000220429 NGBQ9NPG2 151 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 C3orf36Q3SXR2 165 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 TEN1Q86WV5 123 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 FAM57AQ8TBR7 257 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 TTTY13Q9BZ97 58 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 IGLV3-9A0A075B6K5 115 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 A0A096LNJ9 63 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 SPINT2O43291 252 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 SPRY3O43610 288 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 SNCGO76070 127 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 PRR20EP86478 221 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 PRR20CP86479 221 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 PRR20DP86480 221 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 PRR20BP86481 221 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 PRR20AP86496 221 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 FAM90A1Q86YD7 464 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 ITLN1Q8WWA0 313 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 SLC25A33Q9BSK2 321 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 C7orf69Q9H7B7 122 aa10.86□□□□□ -0.67
GABPB1-201ENST00000220429 AMMECR1Q9Y4X0 333 aaPredicted RBP10.86□□□□□ -0.67
GABPB1-201ENST00000220429 IGKV2D-26A0A0A0MRZ7 120 aa10.85□□□□□ -0.67
GABPB1-201ENST00000220429 ZNRF1Q8ND25 227 aa10.85□□□□□ -0.67
GABPB1-201ENST00000220429 PIFOQ8TCI5 191 aa10.85□□□□□ -0.67
GABPB1-201ENST00000220429 DLX4Q92988 240 aaPredicted RBP10.85□□□□□ -0.67
GABPB1-201ENST00000220429 RPP21Q9H633 154 aaKnown RBP10.85□□□□□ -0.67
GABPB1-201ENST00000220429 RAI1Q7Z5J4 1906 aaPredicted RBP10.85□□□□□ -0.67
GABPB1-201ENST00000220429 ROS1P08922 2347 aa10.85□□□□□ -0.67
GABPB1-201ENST00000220429 LHBP01229 141 aa10.85□□□□□ -0.67
GABPB1-201ENST00000220429 DYSFO75923 2080 aa10.84□□□□□ -0.67
GABPB1-201ENST00000220429 PROP1O75360 226 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms